RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 KIAA1644Q3SXP7 199 aa9.81□□□□□ -0.84
SEC61B-201ENST00000223641 NEXN-AS1Q8NBZ9 246 aa9.81□□□□□ -0.84
SEC61B-201ENST00000223641 DNAJC30Q96LL9 226 aa9.81□□□□□ -0.84
SEC61B-201ENST00000223641 ALKBH7Q9BT30 221 aaPredicted RBP9.81□□□□□ -0.84
SEC61B-201ENST00000223641 LAMTOR2Q9Y2Q5 125 aa9.81□□□□□ -0.84
SEC61B-201ENST00000223641 PAX4O43316 350 aa9.8□□□□□ -0.84
SEC61B-201ENST00000223641 NCR2O95944 276 aa9.8□□□□□ -0.84
SEC61B-201ENST00000223641 PPP1R17O96001 155 aa9.8□□□□□ -0.84
SEC61B-201ENST00000223641 LINC00694P0DN24 101 aa9.8□□□□□ -0.84
SEC61B-201ENST00000223641 RPL39LQ96EH5 51 aaKnown RBP9.8□□□□□ -0.84
SEC61B-201ENST00000223641 PRADC1Q9BSG0 188 aa9.8□□□□□ -0.84
SEC61B-201ENST00000223641 TRBV7-3A0A075B6L6 115 aa9.79□□□□□ -0.84
SEC61B-201ENST00000223641 LOC100131303A0A0U1RQF7 123 aa9.79□□□□□ -0.84
SEC61B-201ENST00000223641 PRSS47A8MTI9 375 aa9.79□□□□□ -0.84
SEC61B-201ENST00000223641 TNFRSF6BO95407 300 aa9.79□□□□□ -0.84
SEC61B-201ENST00000223641 PRELID3AQ96N28 172 aa9.79□□□□□ -0.84
SEC61B-201ENST00000223641 A0A0J9YY99 117 aa9.78□□□□□ -0.84
SEC61B-201ENST00000223641 NPYP01303 97 aa9.78□□□□□ -0.84
SEC61B-201ENST00000223641 GYPEP15421 78 aa9.78□□□□□ -0.84
SEC61B-201ENST00000223641 POLR2KP53803 58 aaKnown RBP9.78□□□□□ -0.84
SEC61B-201ENST00000223641 OR10J3Q5JRS4 329 aa9.78□□□□□ -0.84
SEC61B-201ENST00000223641 WWC2-AS2Q96NR7 200 aa9.78□□□□□ -0.84
SEC61B-201ENST00000223641 C20orf78Q9BR46 151 aa9.78□□□□□ -0.84
SEC61B-201ENST00000223641 SRIP30626 198 aa9.77□□□□□ -0.85
SEC61B-201ENST00000223641 UBE2D3P61077 147 aa9.77□□□□□ -0.85
SEC61B-201ENST00000223641 SUMO2P61956 95 aaKnown RBP9.77□□□□□ -0.85
SEC61B-201ENST00000223641 UBE2D2P62837 147 aa9.77□□□□□ -0.85
SEC61B-201ENST00000223641 RPL32P62910 135 aaKnown RBP9.77□□□□□ -0.85
SEC61B-201ENST00000223641 RPL36AP83881 106 aaKnown RBP9.77□□□□□ -0.85
SEC61B-201ENST00000223641 CEMP1Q6PRD7 247 aaPredicted RBP9.77□□□□□ -0.85
SEC61B-201ENST00000223641 ZNRF2Q8NHG8 242 aa9.77□□□□□ -0.85
SEC61B-201ENST00000223641 RPL36ALQ969Q0 106 aaKnown RBP9.77□□□□□ -0.85
SEC61B-201ENST00000223641 A0A096LPF7 62 aa9.76□□□□□ -0.85
SEC61B-201ENST00000223641 MRPL23Q16540 153 aaKnown RBP9.76□□□□□ -0.85
SEC61B-201ENST00000223641 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.76□□□□□ -0.85
SEC61B-201ENST00000223641 TMEM70Q9BUB7 260 aa9.76□□□□□ -0.85
SEC61B-201ENST00000223641 ST20Q9HBF5 79 aa9.76□□□□□ -0.85
SEC61B-201ENST00000223641 TNFRSF18Q9Y5U5 241 aa9.76□□□□□ -0.85
SEC61B-201ENST00000223641 IGLV2-18A0A075B6J9 118 aa9.75□□□□□ -0.85
SEC61B-201ENST00000223641 TRBV27A0A0K0K1C4 114 aa9.75□□□□□ -0.85
SEC61B-201ENST00000223641 GAGE12JA6NER3 117 aa9.75□□□□□ -0.85
SEC61B-201ENST00000223641 NUPR2A6NF83 97 aa9.75□□□□□ -0.85
SEC61B-201ENST00000223641 SDHAF1A6NFY7 115 aa9.75□□□□□ -0.85
SEC61B-201ENST00000223641 GAGE1Q13065 139 aa9.75□□□□□ -0.85
SEC61B-201ENST00000223641 GAGE4Q13068 117 aa9.75□□□□□ -0.85
SEC61B-201ENST00000223641 GAGE5Q13069 117 aa9.75□□□□□ -0.85
SEC61B-201ENST00000223641 GAGE13Q4V321 117 aa9.75□□□□□ -0.85
SEC61B-201ENST00000223641 C15orf53Q8NAA6 179 aa9.75□□□□□ -0.85
SEC61B-201ENST00000223641 C18orf32Q8TCD1 76 aa9.75□□□□□ -0.85
SEC61B-201ENST00000223641 ICOSQ9Y6W8 199 aa9.75□□□□□ -0.85
SEC61B-201ENST00000223641 DAZ4Q86SG3 579 aaKnown RBP9.74□□□□□ -0.85
SEC61B-201ENST00000223641 MUC7Q8TAX7 377 aa9.74□□□□□ -0.85
SEC61B-201ENST00000223641 DAZ3Q9NR90 486 aaKnown RBP9.74□□□□□ -0.85
SEC61B-201ENST00000223641 STARD9Q9P2P6 4700 aa9.73□□□□□ -0.85
SEC61B-201ENST00000223641 IGLL5B9A064 214 aa9.73□□□□□ -0.85
SEC61B-201ENST00000223641 VCYO14598 125 aa9.73□□□□□ -0.85
SEC61B-201ENST00000223641 SH2D6Q7Z4S9 175 aa9.73□□□□□ -0.85
SEC61B-201ENST00000223641 SMIM2Q9BVW6 85 aa9.73□□□□□ -0.85
SEC61B-201ENST00000223641 MAP1LC3AQ9H492 121 aa9.73□□□□□ -0.85
SEC61B-201ENST00000223641 PLECQ15149 4684 aaKnown RBP9.73□□□□□ -0.85
SEC61B-201ENST00000223641 HIST1H2BKO60814 126 aa9.72□□□□□ -0.85
SEC61B-201ENST00000223641 HIST1H2BJP06899 126 aa9.72□□□□□ -0.85
SEC61B-201ENST00000223641 HIST1H2BOP23527 126 aa9.72□□□□□ -0.85
SEC61B-201ENST00000223641 HIST1H2BBP33778 126 aa9.72□□□□□ -0.85
SEC61B-201ENST00000223641 TCTAP57738 103 aa9.72□□□□□ -0.85
SEC61B-201ENST00000223641 HIST1H2BDP58876 126 aa9.72□□□□□ -0.85
SEC61B-201ENST00000223641 HIST1H2BCP62807 126 aa9.72□□□□□ -0.85
SEC61B-201ENST00000223641 Q0VG73 95 aa9.72□□□□□ -0.85
SEC61B-201ENST00000223641 HIST2H2BEQ16778 126 aa9.72□□□□□ -0.85
SEC61B-201ENST00000223641 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.72□□□□□ -0.85
SEC61B-201ENST00000223641 NEGR1Q7Z3B1 354 aa9.72□□□□□ -0.85
SEC61B-201ENST00000223641 ATP6V0E2Q8NHE4 81 aa9.72□□□□□ -0.85
SEC61B-201ENST00000223641 HIST1H2BHQ93079 126 aa9.72□□□□□ -0.85
SEC61B-201ENST00000223641 HIST1H2BNQ99877 126 aa9.72□□□□□ -0.85
SEC61B-201ENST00000223641 HIST1H2BMQ99879 126 aa9.72□□□□□ -0.85
SEC61B-201ENST00000223641 APLNQ9ULZ1 77 aa9.72□□□□□ -0.85
SEC61B-201ENST00000223641 KLK5Q9Y337 293 aaPredicted RBP9.72□□□□□ -0.85
SEC61B-201ENST00000223641 LINC01546A6NGU7 62 aa9.71□□□□□ -0.86
SEC61B-201ENST00000223641 C1orf196B1AJZ1 125 aa9.71□□□□□ -0.86
SEC61B-201ENST00000223641 I3L3M4 83 aa9.71□□□□□ -0.86
SEC61B-201ENST00000223641 TIRAPP58753 221 aa9.71□□□□□ -0.86
SEC61B-201ENST00000223641 Q8N8P6 123 aa9.71□□□□□ -0.86
SEC61B-201ENST00000223641 GTSF1LQ9H1H1 148 aa9.71□□□□□ -0.86
SEC61B-201ENST00000223641 NXT2Q9NPJ8 142 aaKnown RBP9.71□□□□□ -0.86
SEC61B-201ENST00000223641 IGHV3-38A0A0C4DH36 116 aa9.7□□□□□ -0.86
SEC61B-201ENST00000223641 LOC389332A0A1B0GUA5 103 aa9.7□□□□□ -0.86
SEC61B-201ENST00000223641 NUDT3O95989 172 aa9.7□□□□□ -0.86
SEC61B-201ENST00000223641 IFI27P40305 119 aaPredicted RBP9.7□□□□□ -0.86
SEC61B-201ENST00000223641 IQCJQ1A5X6 159 aa9.7□□□□□ -0.86
SEC61B-201ENST00000223641 NTM-AS1Q6ZSK4 140 aa9.7□□□□□ -0.86
SEC61B-201ENST00000223641 URB1-AS1Q96HZ7 61 aa9.7□□□□□ -0.86
SEC61B-201ENST00000223641 K7EMI3 77 aa9.69□□□□□ -0.86
SEC61B-201ENST00000223641 TSHBP01222 138 aa9.69□□□□□ -0.86
SEC61B-201ENST00000223641 PMCHP20382 165 aa9.69□□□□□ -0.86
SEC61B-201ENST00000223641 TMEM97Q5BJF2 176 aa9.69□□□□□ -0.86
SEC61B-201ENST00000223641 LYPD5Q6UWN5 251 aa9.69□□□□□ -0.86
SEC61B-201ENST00000223641 TCAPO15273 167 aa9.68□□□□□ -0.86
SEC61B-201ENST00000223641 COTL1Q14019 142 aa9.68□□□□□ -0.86
SEC61B-201ENST00000223641 ESRGQ1W209 222 aa9.68□□□□□ -0.86
SEC61B-201ENST00000223641 PRSS3P2Q8NHM4 247 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms