RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 TRAV25A0A0B4J276 109 aa14.68□□□□□ -0.06
MMP28-201ENST00000605424 LINC01549A6NIU2 74 aa14.68□□□□□ -0.06
MMP28-201ENST00000605424 RNASE1P07998 156 aaKnown RBP14.68□□□□□ -0.06
MMP28-201ENST00000605424 ANKRD39Q53RE8 183 aa14.68□□□□□ -0.06
MMP28-201ENST00000605424 C12orf54Q6X4T0 127 aa14.68□□□□□ -0.06
MMP28-201ENST00000605424 TOMM6Q96B49 74 aa14.68□□□□□ -0.06
MMP28-201ENST00000605424 DUX3Q96PT4 197 aa14.68□□□□□ -0.06
MMP28-201ENST00000605424 SPAG8Q99932 426 aaPredicted RBP14.68□□□□□ -0.06
MMP28-201ENST00000605424 MDFICQ9P1T7 246 aa14.68□□□□□ -0.06
MMP28-201ENST00000605424 DLEU1O43261 78 aa14.67□□□□□ -0.06
MMP28-201ENST00000605424 FHL3Q13643 280 aa14.67□□□□□ -0.06
MMP28-201ENST00000605424 MAST4O15021 2626 aa14.67□□□□□ -0.06
MMP28-201ENST00000605424 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.66□□□□□ -0.06
MMP28-201ENST00000605424 IGKCP01834 107 aa14.66□□□□□ -0.06
MMP28-201ENST00000605424 KNCNA6PVL3 124 aa14.66□□□□□ -0.06
MMP28-201ENST00000605424 DPM2O94777 84 aa14.66□□□□□ -0.06
MMP28-201ENST00000605424 BOD1L2Q8IYS8 172 aa14.66□□□□□ -0.06
MMP28-201ENST00000605424 TRAV12-1A0A0B4J245 112 aa14.65□□□□□ -0.06
MMP28-201ENST00000605424 TRBV6-5A0A0K0K1A5 114 aa14.65□□□□□ -0.06
MMP28-201ENST00000605424 FGF6P10767 208 aa14.65□□□□□ -0.06
MMP28-201ENST00000605424 SUMO4Q6EEV6 95 aa14.65□□□□□ -0.06
MMP28-201ENST00000605424 RAX2Q96IS3 184 aa14.65□□□□□ -0.06
MMP28-201ENST00000605424 CSTL1Q9H114 145 aa14.65□□□□□ -0.06
MMP28-201ENST00000605424 TMEM160Q9NX00 188 aa14.65□□□□□ -0.06
MMP28-201ENST00000605424 SONP18583 2426 aaKnown RBP14.65□□□□□ -0.06
MMP28-201ENST00000605424 A0A087WX48 190 aa14.64□□□□□ -0.07
MMP28-201ENST00000605424 SIVA1O15304 175 aa14.64□□□□□ -0.07
MMP28-201ENST00000605424 CLUHP3Q96NS8 147 aa14.64□□□□□ -0.07
MMP28-201ENST00000605424 JPT2Q9H910 190 aa14.64□□□□□ -0.07
MMP28-201ENST00000605424 MAP6D1Q9H9H5 199 aa14.64□□□□□ -0.07
MMP28-201ENST00000605424 HHLA3Q9XRX5 114 aa14.64□□□□□ -0.07
MMP28-201ENST00000605424 POLR2KP53803 58 aaKnown RBP14.64□□□□□ -0.07
MMP28-201ENST00000605424 MPV17L2Q567V2 206 aa14.64□□□□□ -0.07
MMP28-201ENST00000605424 VCYO14598 125 aa14.63□□□□□ -0.07
MMP28-201ENST00000605424 CD300EQ496F6 205 aaPredicted RBP14.63□□□□□ -0.07
MMP28-201ENST00000605424 SCGB3A1Q96QR1 104 aa14.63□□□□□ -0.07
MMP28-201ENST00000605424 SMR3AQ99954 134 aa14.63□□□□□ -0.07
MMP28-201ENST00000605424 TSSC4Q9Y5U2 329 aaPredicted RBP14.63□□□□□ -0.07
MMP28-201ENST00000605424 A0A087WWL8 130 aa14.62□□□□□ -0.07
MMP28-201ENST00000605424 CBY3A6NI87 242 aa14.62□□□□□ -0.07
MMP28-201ENST00000605424 F5H697 171 aa14.62□□□□□ -0.07
MMP28-201ENST00000605424 CCL24O00175 119 aa14.62□□□□□ -0.07
MMP28-201ENST00000605424 TP73-AS1Q9UF72 201 aa14.62□□□□□ -0.07
MMP28-201ENST00000605424 ZNF256Q9Y2P7 627 aaPredicted RBP14.62□□□□□ -0.07
MMP28-201ENST00000605424 CRYGDP07320 174 aa14.62□□□□□ -0.07
MMP28-201ENST00000605424 ZNF25P17030 456 aaPredicted RBP14.62□□□□□ -0.07
MMP28-201ENST00000605424 PIK3CD-AS1Q5SR53 167 aa14.62□□□□□ -0.07
MMP28-201ENST00000605424 C2orf91Q6ZV80 131 aa14.62□□□□□ -0.07
MMP28-201ENST00000605424 LINC00467Q9BRT7 94 aa14.62□□□□□ -0.07
MMP28-201ENST00000605424 AGRNO00468 2067 aa14.61□□□□□ -0.07
MMP28-201ENST00000605424 CD28P10747 220 aa14.61□□□□□ -0.07
MMP28-201ENST00000605424 PLNP26678 52 aa14.61□□□□□ -0.07
MMP28-201ENST00000605424 GAGE1Q13065 139 aa14.61□□□□□ -0.07
MMP28-201ENST00000605424 BVES-AS1Q5T3Y7 98 aa14.61□□□□□ -0.07
MMP28-201ENST00000605424 C2orf66Q6UXQ4 117 aa14.61□□□□□ -0.07
MMP28-201ENST00000605424 LINC01006Q8NI28 216 aa14.61□□□□□ -0.07
MMP28-201ENST00000605424 ZNF418Q8TF45 676 aaPredicted RBP14.61□□□□□ -0.07
MMP28-201ENST00000605424 ZNF876PQ49A33 203 aa14.6□□□□□ -0.07
MMP28-201ENST00000605424 ERASQ7Z444 233 aa14.6□□□□□ -0.07
MMP28-201ENST00000605424 KIR2DL4Q99706 377 aa14.6□□□□□ -0.07
MMP28-201ENST00000605424 RBMY1BA6NDE4 496 aaKnown RBP14.6□□□□□ -0.07
MMP28-201ENST00000605424 RBMY1EA6NEQ0 496 aaKnown RBP14.6□□□□□ -0.07
MMP28-201ENST00000605424 H7C1H1 209 aa14.6□□□□□ -0.07
MMP28-201ENST00000605424 RBMY1DP0C7P1 496 aaKnown RBP14.6□□□□□ -0.07
MMP28-201ENST00000605424 RBMY1A1P0DJD3 496 aaKnown RBP14.6□□□□□ -0.07
MMP28-201ENST00000605424 RBMY1CP0DJD4 496 aa14.6□□□□□ -0.07
MMP28-201ENST00000605424 RBMY1FQ15415 496 aaKnown RBP14.6□□□□□ -0.07
MMP28-201ENST00000605424 PTH2Q96A98 100 aa14.6□□□□□ -0.07
MMP28-201ENST00000605424 MRPL35Q9NZE8 188 aaKnown RBP14.6□□□□□ -0.07
MMP28-201ENST00000605424 TRBV27A0A0K0K1C4 114 aa14.59□□□□□ -0.07
MMP28-201ENST00000605424 TMEM208Q9BTX3 173 aa14.59□□□□□ -0.07
MMP28-201ENST00000605424 M0QY20 66 aa14.58□□□□□ -0.07
MMP28-201ENST00000605424 FAM74A4Q5TZK3 123 aa14.58□□□□□ -0.07
MMP28-201ENST00000605424 TRPT1Q86TN4 253 aaKnown RBP14.58□□□□□ -0.07
MMP28-201ENST00000605424 JMJD8Q96S16 334 aa14.58□□□□□ -0.07
MMP28-201ENST00000605424 CYSLTR1Q9Y271 337 aa14.58□□□□□ -0.07
MMP28-201ENST00000605424 F8VRH5 84 aa14.58□□□□□ -0.08
MMP28-201ENST00000605424 NMUP48645 174 aa14.58□□□□□ -0.08
MMP28-201ENST00000605424 HILS1P60008 231 aa14.58□□□□□ -0.08
MMP28-201ENST00000605424 ZNF56Q15929 161 aa14.58□□□□□ -0.08
MMP28-201ENST00000605424 NEXN-AS1Q8NBZ9 246 aa14.58□□□□□ -0.08
MMP28-201ENST00000605424 CITED2Q99967 270 aaPredicted RBP14.58□□□□□ -0.08
MMP28-201ENST00000605424 EDA2RQ9HAV5 297 aa14.58□□□□□ -0.08
MMP28-201ENST00000605424 F8P00451 2351 aa14.57□□□□□ -0.08
MMP28-201ENST00000605424 SDHAF1A6NFY7 115 aa14.57□□□□□ -0.08
MMP28-201ENST00000605424 ORAOV1Q8WV07 137 aa14.57□□□□□ -0.08
MMP28-201ENST00000605424 ZC2HC1BQ5TFG8 222 aa14.56□□□□□ -0.08
MMP28-201ENST00000605424 ZFP2Q6ZN57 461 aa14.56□□□□□ -0.08
MMP28-201ENST00000605424 A0A1W2PRX2 142 aa14.56□□□□□ -0.08
MMP28-201ENST00000605424 NDUFA7O95182 113 aa14.56□□□□□ -0.08
MMP28-201ENST00000605424 RIPPLY3P57055 190 aa14.56□□□□□ -0.08
MMP28-201ENST00000605424 ZNF415Q09FC8 603 aa14.56□□□□□ -0.08
MMP28-201ENST00000605424 ZNF124Q15973 351 aa14.56□□□□□ -0.08
MMP28-201ENST00000605424 C11orf44Q8N8P7 122 aa14.56□□□□□ -0.08
MMP28-201ENST00000605424 SORL1Q92673 2214 aa14.56□□□□□ -0.08
MMP28-201ENST00000605424 MTORP42345 2549 aa14.56□□□□□ -0.08
MMP28-201ENST00000605424 CMC4P56277 68 aaPredicted RBP14.55□□□□□ -0.08
MMP28-201ENST00000605424 TMEM97Q5BJF2 176 aa14.55□□□□□ -0.08
MMP28-201ENST00000605424 CHTOPQ9Y3Y2 248 aaKnown RBP14.55□□□□□ -0.08
MMP28-201ENST00000605424 M0R2P5 195 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms