RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 LAMTOR2Q9Y2Q5 125 aa11.08□□□□□ -0.64
HIF3A-218ENST00000600383 LEPROTL1O95214 131 aa11.08□□□□□ -0.64
HIF3A-218ENST00000600383 C3orf79P0CE67 100 aa11.08□□□□□ -0.64
HIF3A-218ENST00000600383 KRTAP24-1Q3LI83 254 aa11.08□□□□□ -0.64
HIF3A-218ENST00000600383 C9orf66Q5T8R8 295 aa11.08□□□□□ -0.64
HIF3A-218ENST00000600383 DEFB125Q8N687 156 aa11.07□□□□□ -0.64
HIF3A-218ENST00000600383 NRACQ8N912 160 aa11.07□□□□□ -0.64
HIF3A-218ENST00000600383 MRAP2Q96G30 205 aa11.07□□□□□ -0.64
HIF3A-218ENST00000600383 FAM110AQ9BQ89 295 aa11.07□□□□□ -0.64
HIF3A-218ENST00000600383 PRO1933Q9H354 126 aa11.07□□□□□ -0.64
HIF3A-218ENST00000600383 INSL3P51460 131 aa11.06□□□□□ -0.64
HIF3A-218ENST00000600383 LINC00173Q6ZV60 143 aa11.06□□□□□ -0.64
HIF3A-218ENST00000600383 GTSCR1Q86UQ5 136 aa11.06□□□□□ -0.64
HIF3A-218ENST00000600383 C1orf158Q8N1D5 194 aa11.06□□□□□ -0.64
HIF3A-218ENST00000600383 RPL39LQ96EH5 51 aaKnown RBP11.06□□□□□ -0.64
HIF3A-218ENST00000600383 C20orf144Q9BQM9 153 aa11.06□□□□□ -0.64
HIF3A-218ENST00000600383 KIF25-AS1Q9Y6Z4 181 aa11.06□□□□□ -0.64
HIF3A-218ENST00000600383 TRRAPQ9Y4A5 3859 aa11.06□□□□□ -0.64
HIF3A-218ENST00000600383 AZU1P20160 251 aa11.05□□□□□ -0.64
HIF3A-218ENST00000600383 LINC00315P59091 139 aa11.05□□□□□ -0.64
HIF3A-218ENST00000600383 RASL10AQ92737 203 aa11.05□□□□□ -0.64
HIF3A-218ENST00000600383 H0Y8G0 127 aa11.04□□□□□ -0.64
HIF3A-218ENST00000600383 BTF3P20290 206 aaKnown RBP11.04□□□□□ -0.64
HIF3A-218ENST00000600383 ZNF415Q09FC8 603 aa11.04□□□□□ -0.64
HIF3A-218ENST00000600383 ZNF664Q8N3J9 261 aa11.04□□□□□ -0.64
HIF3A-218ENST00000600383 NDUFAF3Q9BU61 184 aa11.04□□□□□ -0.64
HIF3A-218ENST00000600383 NXT2Q9NPJ8 142 aaKnown RBP11.04□□□□□ -0.64
HIF3A-218ENST00000600383 FBN1P35555 2871 aaKnown RBP11.03□□□□□ -0.64
HIF3A-218ENST00000600383 IGLL1P15814 213 aa11.03□□□□□ -0.64
HIF3A-218ENST00000600383 ZNF56Q15929 161 aa11.03□□□□□ -0.64
HIF3A-218ENST00000600383 CRYGDP07320 174 aa11.03□□□□□ -0.64
HIF3A-218ENST00000600383 GIG44P09565 113 aaPredicted RBP11.03□□□□□ -0.64
HIF3A-218ENST00000600383 A0A096LNJ9 63 aa11.02□□□□□ -0.64
HIF3A-218ENST00000600383 IGHV3-73A0A0B4J1V6 119 aa11.02□□□□□ -0.64
HIF3A-218ENST00000600383 M0R2P5 195 aa11.02□□□□□ -0.64
HIF3A-218ENST00000600383 TCAPO15273 167 aa11.02□□□□□ -0.64
HIF3A-218ENST00000600383 SUMO4Q6EEV6 95 aa11.02□□□□□ -0.64
HIF3A-218ENST00000600383 Q8N8P6 123 aa11.02□□□□□ -0.64
HIF3A-218ENST00000600383 SUMO2P61956 95 aaKnown RBP11.02□□□□□ -0.65
HIF3A-218ENST00000600383 PRIMA1Q86XR5 153 aa11.02□□□□□ -0.65
HIF3A-218ENST00000600383 C3orf56Q8N813 242 aa11.02□□□□□ -0.65
HIF3A-218ENST00000600383 C11orf72Q8NBR9 251 aa11.02□□□□□ -0.65
HIF3A-218ENST00000600383 TMEM70Q9BUB7 260 aa11.02□□□□□ -0.65
HIF3A-218ENST00000600383 HSPB8Q9UJY1 196 aa11.02□□□□□ -0.65
HIF3A-218ENST00000600383 Q8N976 141 aa11.01□□□□□ -0.65
HIF3A-218ENST00000600383 DEFB104AQ8WTQ1 72 aa11.01□□□□□ -0.65
HIF3A-218ENST00000600383 LINC00467Q9BRT7 94 aa11.01□□□□□ -0.65
HIF3A-218ENST00000600383 MAP1LC3CQ9BXW4 147 aa11.01□□□□□ -0.65
HIF3A-218ENST00000600383 MAST4O15021 2626 aa11.01□□□□□ -0.65
HIF3A-218ENST00000600383 IGLV2-18A0A075B6J9 118 aa11□□□□□ -0.65
HIF3A-218ENST00000600383 HBDP02042 147 aa11□□□□□ -0.65
HIF3A-218ENST00000600383 ATOH7Q8N100 152 aa11□□□□□ -0.65
HIF3A-218ENST00000600383 POM121L12Q8N7R1 296 aa11□□□□□ -0.65
HIF3A-218ENST00000600383 MCRIP2Q9BUT9 160 aaKnown RBP11□□□□□ -0.65
HIF3A-218ENST00000600383 MRPL16Q9NX20 251 aaKnown RBP11□□□□□ -0.65
HIF3A-218ENST00000600383 STAB1Q9NY15 2570 aa11□□□□□ -0.65
HIF3A-218ENST00000600383 SYS1-DBNDD2H3BUS1 97 aa11□□□□□ -0.65
HIF3A-218ENST00000600383 ZNF747Q9BV97 191 aa11□□□□□ -0.65
HIF3A-218ENST00000600383 C1QTNF4Q9BXJ3 329 aa11□□□□□ -0.65
HIF3A-218ENST00000600383 GOLT1BQ9Y3E0 138 aa11□□□□□ -0.65
HIF3A-218ENST00000600383 PRSS47A8MTI9 375 aa10.99□□□□□ -0.65
HIF3A-218ENST00000600383 WFDC9Q8NEX5 89 aa10.99□□□□□ -0.65
HIF3A-218ENST00000600383 C20orf78Q9BR46 151 aa10.99□□□□□ -0.65
HIF3A-218ENST00000600383 SMIM2Q9BVW6 85 aa10.99□□□□□ -0.65
HIF3A-218ENST00000600383 PPP1R17O96001 155 aa10.99□□□□□ -0.65
HIF3A-218ENST00000600383 LAGE3Q14657 143 aa10.99□□□□□ -0.65
HIF3A-218ENST00000600383 MORN3Q6PF18 240 aaPredicted RBP10.99□□□□□ -0.65
HIF3A-218ENST00000600383 NEGR1Q7Z3B1 354 aa10.99□□□□□ -0.65
HIF3A-218ENST00000600383 SPATA12Q7Z6I5 190 aa10.99□□□□□ -0.65
HIF3A-218ENST00000600383 TMEM158Q8WZ71 300 aa10.99□□□□□ -0.65
HIF3A-218ENST00000600383 C18orf15Q96N68 181 aa10.99□□□□□ -0.65
HIF3A-218ENST00000600383 SPXQ9BT56 116 aa10.99□□□□□ -0.65
HIF3A-218ENST00000600383 CSTL1Q9H114 145 aa10.99□□□□□ -0.65
HIF3A-218ENST00000600383 FCER1GP30273 86 aa10.98□□□□□ -0.65
HIF3A-218ENST00000600383 ST20Q9HBF5 79 aa10.98□□□□□ -0.65
HIF3A-218ENST00000600383 LINC01546A6NGU7 62 aa10.97□□□□□ -0.65
HIF3A-218ENST00000600383 CSNK1G2-AS1Q8NCQ2 148 aa10.97□□□□□ -0.65
HIF3A-218ENST00000600383 PAM16Q9Y3D7 125 aa10.97□□□□□ -0.65
HIF3A-218ENST00000600383 TRGV1A0A0A0MS02 117 aa10.97□□□□□ -0.65
HIF3A-218ENST00000600383 A8MWV9 139 aa10.97□□□□□ -0.65
HIF3A-218ENST00000600383 M0QY20 66 aa10.97□□□□□ -0.65
HIF3A-218ENST00000600383 RNASE8Q8TDE3 154 aaKnown RBP10.97□□□□□ -0.65
HIF3A-218ENST00000600383 C12orf54Q6X4T0 127 aa10.96□□□□□ -0.65
HIF3A-218ENST00000600383 TEX43Q6ZNM6 134 aa10.96□□□□□ -0.65
HIF3A-218ENST00000600383 TMEM263Q8WUH6 116 aaKnown RBP10.96□□□□□ -0.65
HIF3A-218ENST00000600383 PMCHL2Q9BQD1 86 aa10.96□□□□□ -0.65
HIF3A-218ENST00000600383 VAMP8Q9BV40 100 aa10.96□□□□□ -0.65
HIF3A-218ENST00000600383 NUDT3O95989 172 aa10.96□□□□□ -0.66
HIF3A-218ENST00000600383 CFAP126Q5VTH2 177 aa10.96□□□□□ -0.66
HIF3A-218ENST00000600383 SDHAF1A6NFY7 115 aa10.95□□□□□ -0.66
HIF3A-218ENST00000600383 NOP10Q9NPE3 64 aaKnown RBP10.95□□□□□ -0.66
HIF3A-218ENST00000600383 RRN3P1Q2M238 152 aa10.94□□□□□ -0.66
HIF3A-218ENST00000600383 P0DMU3 169 aa10.94□□□□□ -0.66
HIF3A-218ENST00000600383 FAM231AP0DMU4 169 aa10.94□□□□□ -0.66
HIF3A-218ENST00000600383 FAM231CP0DMU5 169 aa10.94□□□□□ -0.66
HIF3A-218ENST00000600383 MAJINQ3KP22 176 aa10.94□□□□□ -0.66
HIF3A-218ENST00000600383 OXLD1Q5BKU9 147 aa10.94□□□□□ -0.66
HIF3A-218ENST00000600383 PET117Q6UWS5 81 aa10.94□□□□□ -0.66
HIF3A-218ENST00000600383 IFI27L1Q96BM0 104 aa10.94□□□□□ -0.66
HIF3A-218ENST00000600383 COL6A5A8TX70 2615 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms