RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 RS1O15537 224 aa11.68□□□□□ -0.54
SSBP4-207ENST00000600244 PAX4O43316 350 aa11.68□□□□□ -0.54
SSBP4-207ENST00000600244 EIF4E3Q8N5X7 224 aaKnown RBP11.68□□□□□ -0.54
SSBP4-207ENST00000600244 NHLRC2Q8NBF2 726 aa11.68□□□□□ -0.54
SSBP4-207ENST00000600244 KRTAP9-6A0A140TA67 174 aa11.67□□□□□ -0.54
SSBP4-207ENST00000600244 GNG4P50150 75 aa11.67□□□□□ -0.54
SSBP4-207ENST00000600244 C11orf72Q8NBR9 251 aa11.67□□□□□ -0.54
SSBP4-207ENST00000600244 IGKV3D-20A0A0C4DH25 116 aa11.66□□□□□ -0.54
SSBP4-207ENST00000600244 PGPEP1LA6NFU8 196 aa11.66□□□□□ -0.54
SSBP4-207ENST00000600244 SH2D1AO60880 128 aa11.66□□□□□ -0.54
SSBP4-207ENST00000600244 CRYGDP07320 174 aa11.66□□□□□ -0.54
SSBP4-207ENST00000600244 HNRNPA3P51991 378 aaKnown RBP11.66□□□□□ -0.54
SSBP4-207ENST00000600244 MUC21Q5SSG8 566 aa11.66□□□□□ -0.54
SSBP4-207ENST00000600244 FAM162BQ5T6X4 162 aa11.66□□□□□ -0.54
SSBP4-207ENST00000600244 C10orf126Q8N4M7 172 aa11.66□□□□□ -0.54
SSBP4-207ENST00000600244 OCC1Q8TAD7 63 aa11.66□□□□□ -0.54
SSBP4-207ENST00000600244 TP53TG3Q9ULZ0 132 aa11.66□□□□□ -0.54
SSBP4-207ENST00000600244 TRGV2A0A075B6R0 118 aa11.65□□□□□ -0.54
SSBP4-207ENST00000600244 LINC00862A6NCI5 91 aa11.65□□□□□ -0.54
SSBP4-207ENST00000600244 MRPL23Q16540 153 aaKnown RBP11.65□□□□□ -0.54
SSBP4-207ENST00000600244 FAM159AQ6UWV7 190 aa11.65□□□□□ -0.54
SSBP4-207ENST00000600244 NEGR1Q7Z3B1 354 aa11.65□□□□□ -0.54
SSBP4-207ENST00000600244 CHAC1Q9BUX1 264 aa11.65□□□□□ -0.54
SSBP4-207ENST00000600244 FAM74A3Q4VXF1 159 aa11.64□□□□□ -0.55
SSBP4-207ENST00000600244 IBA57Q5T440 356 aaKnown RBP11.64□□□□□ -0.55
SSBP4-207ENST00000600244 DAZAP1Q96EP5 407 aaKnown RBP11.64□□□□□ -0.55
SSBP4-207ENST00000600244 KCNS1Q96KK3 526 aa11.64□□□□□ -0.55
SSBP4-207ENST00000600244 SMIM7Q9BQ49 75 aa11.64□□□□□ -0.55
SSBP4-207ENST00000600244 C19orf71A6NCJ1 209 aa11.63□□□□□ -0.55
SSBP4-207ENST00000600244 ZNF727A8MUV8 499 aa11.63□□□□□ -0.55
SSBP4-207ENST00000600244 KRBOX1C9JBD0 128 aa11.63□□□□□ -0.55
SSBP4-207ENST00000600244 K7EN84 100 aa11.63□□□□□ -0.55
SSBP4-207ENST00000600244 GNRH2O43555 120 aa11.63□□□□□ -0.55
SSBP4-207ENST00000600244 TYMSP04818 313 aa11.63□□□□□ -0.55
SSBP4-207ENST00000600244 CEBPGP53567 150 aa11.63□□□□□ -0.55
SSBP4-207ENST00000600244 LINC01559Q495D7 138 aa11.63□□□□□ -0.55
SSBP4-207ENST00000600244 NAGKQ9UJ70 344 aa11.63□□□□□ -0.55
SSBP4-207ENST00000600244 IGHV3-16A0A0C4DH30 117 aa11.62□□□□□ -0.55
SSBP4-207ENST00000600244 CRYBA4P53673 196 aa11.62□□□□□ -0.55
SSBP4-207ENST00000600244 TCL1AP56279 114 aa11.62□□□□□ -0.55
SSBP4-207ENST00000600244 WFDC2Q14508 124 aa11.62□□□□□ -0.55
SSBP4-207ENST00000600244 DNLZQ5SXM8 178 aa11.62□□□□□ -0.55
SSBP4-207ENST00000600244 UQCC3Q6UW78 93 aa11.62□□□□□ -0.55
SSBP4-207ENST00000600244 CIRBP-AS1Q8TBR5 109 aa11.62□□□□□ -0.55
SSBP4-207ENST00000600244 SDF2L1Q9HCN8 221 aa11.62□□□□□ -0.55
SSBP4-207ENST00000600244 PRO0255Q9UI72 69 aa11.62□□□□□ -0.55
SSBP4-207ENST00000600244 TRGV11A0A075B6L2 103 aa11.61□□□□□ -0.55
SSBP4-207ENST00000600244 LINC01551Q86U37 167 aa11.61□□□□□ -0.55
SSBP4-207ENST00000600244 BIN3Q9NQY0 253 aa11.61□□□□□ -0.55
SSBP4-207ENST00000600244 GSN-AS1Q9NRJ2 163 aa11.61□□□□□ -0.55
SSBP4-207ENST00000600244 MGST1P10620 155 aaKnown RBP11.6□□□□□ -0.55
SSBP4-207ENST00000600244 PRR27Q6MZM9 219 aa11.6□□□□□ -0.55
SSBP4-207ENST00000600244 IBA57-AS1B1ANH7 110 aa11.59□□□□□ -0.55
SSBP4-207ENST00000600244 B4DEV8 164 aa11.59□□□□□ -0.55
SSBP4-207ENST00000600244 M0R036 132 aa11.59□□□□□ -0.55
SSBP4-207ENST00000600244 ORM1P02763 201 aa11.59□□□□□ -0.55
SSBP4-207ENST00000600244 CXCL1P09341 107 aa11.59□□□□□ -0.55
SSBP4-207ENST00000600244 SFTA3P0C7M3 94 aa11.59□□□□□ -0.55
SSBP4-207ENST00000600244 RNASE3P12724 160 aaKnown RBP11.59□□□□□ -0.55
SSBP4-207ENST00000600244 ZNF415Q09FC8 603 aa11.59□□□□□ -0.55
SSBP4-207ENST00000600244 SLAQ13239 276 aa11.59□□□□□ -0.55
SSBP4-207ENST00000600244 TMEM241Q24JQ0 296 aa11.59□□□□□ -0.55
SSBP4-207ENST00000600244 LINC01620Q4KN68 170 aa11.59□□□□□ -0.55
SSBP4-207ENST00000600244 COMMD7Q86VX2 200 aa11.59□□□□□ -0.55
SSBP4-207ENST00000600244 C9orf85Q96MD7 179 aa11.59□□□□□ -0.55
SSBP4-207ENST00000600244 HHLA3Q9XRX5 114 aa11.59□□□□□ -0.55
SSBP4-207ENST00000600244 SPINK4O60575 86 aa11.58□□□□□ -0.56
SSBP4-207ENST00000600244 GAS8-AS1O95177 125 aa11.58□□□□□ -0.56
SSBP4-207ENST00000600244 FAM231DQ6ZW35 169 aa11.58□□□□□ -0.56
SSBP4-207ENST00000600244 NAT8Q9UHE5 227 aa11.58□□□□□ -0.56
SSBP4-207ENST00000600244 TRGV1A0A0A0MS02 117 aa11.57□□□□□ -0.56
SSBP4-207ENST00000600244 RPL23P62829 140 aaKnown RBP11.57□□□□□ -0.56
SSBP4-207ENST00000600244 RPL19P84098 196 aaKnown RBP11.57□□□□□ -0.56
SSBP4-207ENST00000600244 FHL2Q14192 279 aa11.57□□□□□ -0.56
SSBP4-207ENST00000600244 NUDT10Q8NFP7 164 aa11.57□□□□□ -0.56
SSBP4-207ENST00000600244 NUDT11Q96G61 164 aa11.57□□□□□ -0.56
SSBP4-207ENST00000600244 SPXQ9BT56 116 aa11.57□□□□□ -0.56
SSBP4-207ENST00000600244 TMEM218A2RU14 115 aa11.56□□□□□ -0.56
SSBP4-207ENST00000600244 RPL37AP61513 92 aaKnown RBP11.56□□□□□ -0.56
SSBP4-207ENST00000600244 PTH2Q96A98 100 aa11.56□□□□□ -0.56
SSBP4-207ENST00000600244 RNASE7Q9H1E1 156 aaKnown RBP11.56□□□□□ -0.56
SSBP4-207ENST00000600244 IL36BQ9NZH7 164 aa11.56□□□□□ -0.56
SSBP4-207ENST00000600244 K7EQD1 137 aa11.55□□□□□ -0.56
SSBP4-207ENST00000600244 P01737 135 aa11.55□□□□□ -0.56
SSBP4-207ENST00000600244 IGHV3-53P01767 116 aa11.55□□□□□ -0.56
SSBP4-207ENST00000600244 RASL10AQ92737 203 aa11.55□□□□□ -0.56
SSBP4-207ENST00000600244 ISOC2Q96AB3 205 aa11.55□□□□□ -0.56
SSBP4-207ENST00000600244 SSBP4Q9BWG4 385 aaPredicted RBP11.55□□□□□ -0.56
SSBP4-207ENST00000600244 Q9HAA7 133 aa11.55□□□□□ -0.56
SSBP4-207ENST00000600244 TMSB15BA0A087X1C1 80 aa11.54□□□□□ -0.56
SSBP4-207ENST00000600244 GRIFINA4D1Z8 144 aa11.54□□□□□ -0.56
SSBP4-207ENST00000600244 M0R2P5 195 aa11.54□□□□□ -0.56
SSBP4-207ENST00000600244 ADCYAP1P18509 176 aa11.54□□□□□ -0.56
SSBP4-207ENST00000600244 SRIP30626 198 aa11.54□□□□□ -0.56
SSBP4-207ENST00000600244 OR2D3Q8NGH3 330 aa11.54□□□□□ -0.56
SSBP4-207ENST00000600244 OSTCQ9NRP0 149 aa11.54□□□□□ -0.56
SSBP4-207ENST00000600244 IGHV3-38A0A0C4DH36 116 aa11.53□□□□□ -0.56
SSBP4-207ENST00000600244 SNAI2O43623 268 aa11.53□□□□□ -0.56
SSBP4-207ENST00000600244 ARMS2P0C7Q2 107 aa11.53□□□□□ -0.56
SSBP4-207ENST00000600244 RPS20P60866 119 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms