RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 WIPF1O43516 503 aa8.34□□□□□ -1.07
LIG3-204ENST00000585740 ATP5LO75964 103 aa8.34□□□□□ -1.07
LIG3-204ENST00000585740 MGPP08493 103 aa8.34□□□□□ -1.07
LIG3-204ENST00000585740 IGLC3P0DOY3 106 aa8.34□□□□□ -1.07
LIG3-204ENST00000585740 GATA1P15976 413 aaPredicted RBP8.34□□□□□ -1.07
LIG3-204ENST00000585740 RPL32P62910 135 aaKnown RBP8.34□□□□□ -1.07
LIG3-204ENST00000585740 LAGE3Q14657 143 aa8.34□□□□□ -1.07
LIG3-204ENST00000585740 ORMDL2Q53FV1 153 aa8.34□□□□□ -1.07
LIG3-204ENST00000585740 ATOH7Q8N100 152 aa8.34□□□□□ -1.07
LIG3-204ENST00000585740 C14orf178Q8N769 122 aaPredicted RBP8.34□□□□□ -1.07
LIG3-204ENST00000585740 SMIM2Q9BVW6 85 aa8.34□□□□□ -1.07
LIG3-204ENST00000585740 MAP6D1Q9H9H5 199 aa8.34□□□□□ -1.07
LIG3-204ENST00000585740 TRAV12-2A0A075B6T6 113 aa8.33□□□□□ -1.08
LIG3-204ENST00000585740 GAS8-AS1O95177 125 aa8.33□□□□□ -1.08
LIG3-204ENST00000585740 G0S2P27469 103 aa8.33□□□□□ -1.08
LIG3-204ENST00000585740 SUMO2P61956 95 aaKnown RBP8.33□□□□□ -1.08
LIG3-204ENST00000585740 CD300EQ496F6 205 aaPredicted RBP8.33□□□□□ -1.08
LIG3-204ENST00000585740 CITED2Q99967 270 aaPredicted RBP8.33□□□□□ -1.08
LIG3-204ENST00000585740 LINC00467Q9BRT7 94 aa8.33□□□□□ -1.08
LIG3-204ENST00000585740 C2orf88Q9BSF0 95 aa8.33□□□□□ -1.08
LIG3-204ENST00000585740 KIF25-AS1Q9Y6Z4 181 aa8.33□□□□□ -1.08
LIG3-204ENST00000585740 TRAV26-2A0A0B4J265 109 aa8.32□□□□□ -1.08
LIG3-204ENST00000585740 A0A1W2PRX2 142 aa8.32□□□□□ -1.08
LIG3-204ENST00000585740 LINC01549A6NIU2 74 aa8.32□□□□□ -1.08
LIG3-204ENST00000585740 IGLL1P15814 213 aa8.32□□□□□ -1.08
LIG3-204ENST00000585740 PIK3CD-AS1Q5SR53 167 aa8.32□□□□□ -1.08
LIG3-204ENST00000585740 Q8N1Y9 231 aa8.32□□□□□ -1.08
LIG3-204ENST00000585740 RASL10AQ92737 203 aa8.32□□□□□ -1.08
LIG3-204ENST00000585740 ZNF256Q9Y2P7 627 aaPredicted RBP8.32□□□□□ -1.08
LIG3-204ENST00000585740 GOLT1BQ9Y3E0 138 aa8.32□□□□□ -1.08
LIG3-204ENST00000585740 CBY3A6NI87 242 aa8.31□□□□□ -1.08
LIG3-204ENST00000585740 H0Y8G0 127 aa8.31□□□□□ -1.08
LIG3-204ENST00000585740 HNRNPA3P51991 378 aaKnown RBP8.31□□□□□ -1.08
LIG3-204ENST00000585740 Q6ZN92 141 aa8.31□□□□□ -1.08
LIG3-204ENST00000585740 PTH2Q96A98 100 aa8.31□□□□□ -1.08
LIG3-204ENST00000585740 PMCHL2Q9BQD1 86 aa8.31□□□□□ -1.08
LIG3-204ENST00000585740 SORL1Q92673 2214 aa8.31□□□□□ -1.08
LIG3-204ENST00000585740 NUDT3O95989 172 aa8.3□□□□□ -1.08
LIG3-204ENST00000585740 INSP01308 110 aa8.3□□□□□ -1.08
LIG3-204ENST00000585740 PROK1P58294 105 aa8.3□□□□□ -1.08
LIG3-204ENST00000585740 LINC00315P59091 139 aa8.3□□□□□ -1.08
LIG3-204ENST00000585740 ZNF415Q09FC8 603 aa8.3□□□□□ -1.08
LIG3-204ENST00000585740 C11orf44Q8N8P7 122 aa8.3□□□□□ -1.08
LIG3-204ENST00000585740 MDFICQ9P1T7 246 aa8.3□□□□□ -1.08
LIG3-204ENST00000585740 MRPS16Q9Y3D3 137 aaKnown RBP8.3□□□□□ -1.08
LIG3-204ENST00000585740 ANK2Q01484 3957 aa8.3□□□□□ -1.08
LIG3-204ENST00000585740 TRBV6-5A0A0K0K1A5 114 aa8.29□□□□□ -1.08
LIG3-204ENST00000585740 RBMY1BA6NDE4 496 aaKnown RBP8.29□□□□□ -1.08
LIG3-204ENST00000585740 RBMY1EA6NEQ0 496 aaKnown RBP8.29□□□□□ -1.08
LIG3-204ENST00000585740 OR11H12B2RN74 326 aa8.29□□□□□ -1.08
LIG3-204ENST00000585740 SPRY2O43597 315 aa8.29□□□□□ -1.08
LIG3-204ENST00000585740 RBMY1DP0C7P1 496 aaKnown RBP8.29□□□□□ -1.08
LIG3-204ENST00000585740 MAJINQ3KP22 176 aa8.29□□□□□ -1.08
LIG3-204ENST00000585740 NDUFA11Q86Y39 141 aa8.29□□□□□ -1.08
LIG3-204ENST00000585740 STHQ8IWL8 128 aa8.29□□□□□ -1.08
LIG3-204ENST00000585740 FAM110AQ9BQ89 295 aa8.29□□□□□ -1.08
LIG3-204ENST00000585740 hDV102S1A0JD36 115 aa8.28□□□□□ -1.08
LIG3-204ENST00000585740 F5H697 171 aa8.28□□□□□ -1.08
LIG3-204ENST00000585740 VCYO14598 125 aa8.28□□□□□ -1.08
LIG3-204ENST00000585740 TCAPO15273 167 aa8.28□□□□□ -1.08
LIG3-204ENST00000585740 PRSS1P07477 247 aa8.28□□□□□ -1.08
LIG3-204ENST00000585740 FXYD7P58549 80 aa8.28□□□□□ -1.08
LIG3-204ENST00000585740 KRTAP24-1Q3LI83 254 aa8.28□□□□□ -1.08
LIG3-204ENST00000585740 SUMO4Q6EEV6 95 aa8.28□□□□□ -1.08
LIG3-204ENST00000585740 SLC25A34Q6PIV7 304 aa8.28□□□□□ -1.08
LIG3-204ENST00000585740 RPL39LQ96EH5 51 aaKnown RBP8.28□□□□□ -1.08
LIG3-204ENST00000585740 SPXQ9BT56 116 aa8.28□□□□□ -1.08
LIG3-204ENST00000585740 SNHG12Q9BXW3 62 aa8.28□□□□□ -1.08
LIG3-204ENST00000585740 H7C1H1 209 aa8.27□□□□□ -1.09
LIG3-204ENST00000585740 EREGO14944 169 aa8.27□□□□□ -1.09
LIG3-204ENST00000585740 NUTF2P61970 127 aaKnown RBP8.27□□□□□ -1.09
LIG3-204ENST00000585740 ODF3L2Q3SX64 289 aa8.27□□□□□ -1.09
LIG3-204ENST00000585740 TRPT1Q86TN4 253 aaKnown RBP8.27□□□□□ -1.09
LIG3-204ENST00000585740 TOMM6Q96B49 74 aa8.27□□□□□ -1.09
LIG3-204ENST00000585740 C18orf15Q96N68 181 aa8.27□□□□□ -1.09
LIG3-204ENST00000585740 CSTL1Q9H114 145 aa8.27□□□□□ -1.09
LIG3-204ENST00000585740 EDA2RQ9HAV5 297 aa8.27□□□□□ -1.09
LIG3-204ENST00000585740 A0A087WWL8 130 aa8.26□□□□□ -1.09
LIG3-204ENST00000585740 TRAV12-1A0A0B4J245 112 aa8.26□□□□□ -1.09
LIG3-204ENST00000585740 A8MWV9 139 aa8.26□□□□□ -1.09
LIG3-204ENST00000585740 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.26□□□□□ -1.09
LIG3-204ENST00000585740 M0R2P5 195 aa8.26□□□□□ -1.09
LIG3-204ENST00000585740 SAP30O75446 220 aa8.26□□□□□ -1.09
LIG3-204ENST00000585740 CRYGDP07320 174 aa8.26□□□□□ -1.09
LIG3-204ENST00000585740 RBMY1A1P0DJD3 496 aaKnown RBP8.26□□□□□ -1.09
LIG3-204ENST00000585740 RBMY1CP0DJD4 496 aa8.26□□□□□ -1.09
LIG3-204ENST00000585740 POLR2KP53803 58 aaKnown RBP8.26□□□□□ -1.09
LIG3-204ENST00000585740 RBMY1FQ15415 496 aaKnown RBP8.26□□□□□ -1.09
LIG3-204ENST00000585740 ZNF56Q15929 161 aa8.26□□□□□ -1.09
LIG3-204ENST00000585740 NSUN5P1Q3KNT7 163 aa8.26□□□□□ -1.09
LIG3-204ENST00000585740 ZNF876PQ49A33 203 aa8.26□□□□□ -1.09
LIG3-204ENST00000585740 LINC01587Q99440 93 aa8.26□□□□□ -1.09
LIG3-204ENST00000585740 KIR2DL4Q99706 377 aa8.26□□□□□ -1.09
LIG3-204ENST00000585740 MCRIP2Q9BUT9 160 aaKnown RBP8.26□□□□□ -1.09
LIG3-204ENST00000585740 ZMAT4Q9H898 229 aa8.26□□□□□ -1.09
LIG3-204ENST00000585740 ADARB2-AS1A8MUL3 147 aa8.25□□□□□ -1.09
LIG3-204ENST00000585740 IGLV1-51P01701 117 aa8.25□□□□□ -1.09
LIG3-204ENST00000585740 COX8AP10176 69 aa8.25□□□□□ -1.09
LIG3-204ENST00000585740 ODF1Q14990 250 aa8.25□□□□□ -1.09
LIG3-204ENST00000585740 ZNF124Q15973 351 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms