RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 CBY3A6NI87 242 aa7.61□□□□□ -1.19
LIG3-203ENST00000585370 IGLL1P15814 213 aa7.61□□□□□ -1.19
LIG3-203ENST00000585370 LINC01587Q99440 93 aa7.61□□□□□ -1.19
LIG3-203ENST00000585370 SPXQ9BT56 116 aa7.61□□□□□ -1.19
LIG3-203ENST00000585370 NDUFAF3Q9BU61 184 aa7.61□□□□□ -1.19
LIG3-203ENST00000585370 AP5S1Q9NUS5 200 aa7.61□□□□□ -1.19
LIG3-203ENST00000585370 TNFRSF6BO95407 300 aa7.6□□□□□ -1.19
LIG3-203ENST00000585370 FXYD7P58549 80 aa7.6□□□□□ -1.19
LIG3-203ENST00000585370 ZNF415Q09FC8 603 aa7.6□□□□□ -1.19
LIG3-203ENST00000585370 ZNF124Q15973 351 aa7.6□□□□□ -1.19
LIG3-203ENST00000585370 C20orf78Q9BR46 151 aa7.6□□□□□ -1.19
LIG3-203ENST00000585370 NIT2Q9NQR4 276 aa7.6□□□□□ -1.19
LIG3-203ENST00000585370 C19orf73Q9NVV2 129 aa7.6□□□□□ -1.19
LIG3-203ENST00000585370 LINC01546A6NGU7 62 aa7.59□□□□□ -1.19
LIG3-203ENST00000585370 K7EIL1 84 aa7.59□□□□□ -1.19
LIG3-203ENST00000585370 K7EMI3 77 aa7.59□□□□□ -1.19
LIG3-203ENST00000585370 NPYP01303 97 aa7.59□□□□□ -1.19
LIG3-203ENST00000585370 KRTAP10-11P60412 298 aa7.59□□□□□ -1.19
LIG3-203ENST00000585370 S100A12P80511 92 aa7.59□□□□□ -1.19
LIG3-203ENST00000585370 GTSCR1Q86UQ5 136 aa7.59□□□□□ -1.19
LIG3-203ENST00000585370 C14orf178Q8N769 122 aaPredicted RBP7.59□□□□□ -1.19
LIG3-203ENST00000585370 Q8N8P6 123 aa7.59□□□□□ -1.19
LIG3-203ENST00000585370 URB1-AS1Q96HZ7 61 aa7.59□□□□□ -1.19
LIG3-203ENST00000585370 MDFICQ9P1T7 246 aa7.59□□□□□ -1.19
LIG3-203ENST00000585370 HSPB8Q9UJY1 196 aa7.59□□□□□ -1.19
LIG3-203ENST00000585370 SORL1Q92673 2214 aa7.59□□□□□ -1.19
LIG3-203ENST00000585370 M0R2P5 195 aa7.58□□□□□ -1.2
LIG3-203ENST00000585370 SCGB1D1O95968 90 aa7.58□□□□□ -1.2
LIG3-203ENST00000585370 IFI27P40305 119 aaPredicted RBP7.58□□□□□ -1.2
LIG3-203ENST00000585370 Q6ZWC4 215 aa7.58□□□□□ -1.2
LIG3-203ENST00000585370 FAM19A2Q8N3H0 131 aa7.58□□□□□ -1.2
LIG3-203ENST00000585370 TMEM208Q9BTX3 173 aa7.58□□□□□ -1.2
LIG3-203ENST00000585370 GOLT1BQ9Y3E0 138 aa7.58□□□□□ -1.2
LIG3-203ENST00000585370 KIF25-AS1Q9Y6Z4 181 aa7.58□□□□□ -1.2
LIG3-203ENST00000585370 AGRNO00468 2067 aa7.57□□□□□ -1.2
LIG3-203ENST00000585370 IGHV1-24A0A0C4DH33 117 aa7.57□□□□□ -1.2
LIG3-203ENST00000585370 LOC389332A0A1B0GUA5 103 aa7.57□□□□□ -1.2
LIG3-203ENST00000585370 A8MWV9 139 aa7.57□□□□□ -1.2
LIG3-203ENST00000585370 SMKR1H3BMG3 65 aa7.57□□□□□ -1.2
LIG3-203ENST00000585370 LEPROTL1O95214 131 aa7.57□□□□□ -1.2
LIG3-203ENST00000585370 RBMY1A1P0DJD3 496 aaKnown RBP7.57□□□□□ -1.2
LIG3-203ENST00000585370 RBMY1CP0DJD4 496 aa7.57□□□□□ -1.2
LIG3-203ENST00000585370 RPL32P62910 135 aaKnown RBP7.57□□□□□ -1.2
LIG3-203ENST00000585370 RBMY1FQ15415 496 aaKnown RBP7.57□□□□□ -1.2
LIG3-203ENST00000585370 ZNF876PQ49A33 203 aa7.57□□□□□ -1.2
LIG3-203ENST00000585370 LCE2DQ5TA82 110 aaPredicted RBP7.57□□□□□ -1.2
LIG3-203ENST00000585370 NRACQ8N912 160 aa7.57□□□□□ -1.2
LIG3-203ENST00000585370 XCL2Q9UBD3 114 aa7.57□□□□□ -1.2
LIG3-203ENST00000585370 NCR2O95944 276 aa7.56□□□□□ -1.2
LIG3-203ENST00000585370 MGPP08493 103 aa7.56□□□□□ -1.2
LIG3-203ENST00000585370 BTF3P20290 206 aaKnown RBP7.56□□□□□ -1.2
LIG3-203ENST00000585370 G0S2P27469 103 aa7.56□□□□□ -1.2
LIG3-203ENST00000585370 LINC00315P59091 139 aa7.56□□□□□ -1.2
LIG3-203ENST00000585370 KRTDAPP60985 99 aa7.56□□□□□ -1.2
LIG3-203ENST00000585370 C1orf158Q8N1D5 194 aa7.56□□□□□ -1.2
LIG3-203ENST00000585370 TMEM70Q9BUB7 260 aa7.56□□□□□ -1.2
LIG3-203ENST00000585370 ZMAT5Q9UDW3 170 aaKnown RBP7.56□□□□□ -1.2
LIG3-203ENST00000585370 C20orf202A1L168 122 aa7.55□□□□□ -1.2
LIG3-203ENST00000585370 LINC01549A6NIU2 74 aa7.55□□□□□ -1.2
LIG3-203ENST00000585370 H7C1H1 209 aa7.55□□□□□ -1.2
LIG3-203ENST00000585370 HBDP02042 147 aa7.55□□□□□ -1.2
LIG3-203ENST00000585370 CRYGDP07320 174 aa7.55□□□□□ -1.2
LIG3-203ENST00000585370 C3orf79P0CE67 100 aa7.55□□□□□ -1.2
LIG3-203ENST00000585370 HTN1P15515 57 aa7.55□□□□□ -1.2
LIG3-203ENST00000585370 FCER1GP30273 86 aa7.55□□□□□ -1.2
LIG3-203ENST00000585370 SUMO2P61956 95 aaKnown RBP7.55□□□□□ -1.2
LIG3-203ENST00000585370 EGFEM1PQ0D2K5 195 aa7.55□□□□□ -1.2
LIG3-203ENST00000585370 PMCHL1Q16048 86 aa7.55□□□□□ -1.2
LIG3-203ENST00000585370 DEFB121Q5J5C9 76 aa7.55□□□□□ -1.2
LIG3-203ENST00000585370 MAP1LC3CQ9BXW4 147 aa7.55□□□□□ -1.2
LIG3-203ENST00000585370 EDA2RQ9HAV5 297 aa7.55□□□□□ -1.2
LIG3-203ENST00000585370 IGLV2-18A0A075B6J9 118 aa7.54□□□□□ -1.2
LIG3-203ENST00000585370 TRBV6-5A0A0K0K1A5 114 aa7.54□□□□□ -1.2
LIG3-203ENST00000585370 F5H697 171 aa7.54□□□□□ -1.2
LIG3-203ENST00000585370 RHODO00212 210 aa7.54□□□□□ -1.2
LIG3-203ENST00000585370 TCAPO15273 167 aa7.54□□□□□ -1.2
LIG3-203ENST00000585370 SPRY2O43597 315 aa7.54□□□□□ -1.2
LIG3-203ENST00000585370 LAGE3Q14657 143 aa7.54□□□□□ -1.2
LIG3-203ENST00000585370 LGALS9BQ3B8N2 356 aa7.54□□□□□ -1.2
LIG3-203ENST00000585370 ORMDL2Q53FV1 153 aa7.54□□□□□ -1.2
LIG3-203ENST00000585370 PET117Q6UWS5 81 aa7.54□□□□□ -1.2
LIG3-203ENST00000585370 SPATA12Q7Z6I5 190 aa7.54□□□□□ -1.2
LIG3-203ENST00000585370 C11orf72Q8NBR9 251 aa7.54□□□□□ -1.2
LIG3-203ENST00000585370 TMEM263Q8WUH6 116 aaKnown RBP7.54□□□□□ -1.2
LIG3-203ENST00000585370 RASL10AQ92737 203 aa7.54□□□□□ -1.2
LIG3-203ENST00000585370 SMIM2Q9BVW6 85 aa7.54□□□□□ -1.2
LIG3-203ENST00000585370 CSTL1Q9H114 145 aa7.54□□□□□ -1.2
LIG3-203ENST00000585370 ST20Q9HBF5 79 aa7.54□□□□□ -1.2
LIG3-203ENST00000585370 TRAV26-2A0A0B4J265 109 aa7.53□□□□□ -1.2
LIG3-203ENST00000585370 VCYO14598 125 aa7.53□□□□□ -1.2
LIG3-203ENST00000585370 CIDEAO60543 219 aa7.53□□□□□ -1.2
LIG3-203ENST00000585370 GATA1P15976 413 aaPredicted RBP7.53□□□□□ -1.2
LIG3-203ENST00000585370 RPL35AP18077 110 aaKnown RBP7.53□□□□□ -1.2
LIG3-203ENST00000585370 C16orf74Q96GX8 76 aa7.53□□□□□ -1.2
LIG3-203ENST00000585370 MUC4Q99102 2169 aa7.52□□□□□ -1.21
LIG3-203ENST00000585370 A0A087WWL8 130 aa7.52□□□□□ -1.21
LIG3-203ENST00000585370 KIR2DL5BA0A0G2JN68 375 aa7.52□□□□□ -1.21
LIG3-203ENST00000585370 KIR2DL5BA0A0G2JPC4 375 aa7.52□□□□□ -1.21
LIG3-203ENST00000585370 SYS1-DBNDD2H3BUS1 97 aa7.52□□□□□ -1.21
LIG3-203ENST00000585370 GAS8-AS1O95177 125 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms