RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 APODP05090 189 aa0.67□□□□□ -2.3
COPS3-213ENST00000577210 S100A1P23297 94 aa0.67□□□□□ -2.3
COPS3-213ENST00000577210 DEFB132Q7Z7B7 95 aa0.67□□□□□ -2.3
COPS3-213ENST00000577210 C20orf197Q8N268 126 aa0.67□□□□□ -2.3
COPS3-213ENST00000577210 COPS9Q8WXC6 57 aa0.67□□□□□ -2.3
COPS3-213ENST00000577210 LSM10Q969L4 123 aaKnown RBP0.67□□□□□ -2.3
COPS3-213ENST00000577210 RPRMQ9NS64 109 aa0.67□□□□□ -2.3
COPS3-213ENST00000577210 MUC22E2RYF6 1773 aaPredicted RBP0.67□□□□□ -2.3
COPS3-213ENST00000577210 PLXNA2O75051 1894 aa0.67□□□□□ -2.3
COPS3-213ENST00000577210 ZNF142P52746 1687 aaPredicted RBP0.66□□□□□ -2.3
COPS3-213ENST00000577210 DAPK1P53355 1430 aa0.66□□□□□ -2.3
COPS3-213ENST00000577210 NAIPQ13075 1403 aa0.66□□□□□ -2.3
COPS3-213ENST00000577210 SCAPERQ9BY12 1400 aa0.66□□□□□ -2.3
COPS3-213ENST00000577210 PVALEFA0A1B0GWK0 134 aa0.66□□□□□ -2.3
COPS3-213ENST00000577210 RBM3P98179 157 aaKnown RBP0.66□□□□□ -2.3
COPS3-213ENST00000577210 KLKP1Q107X0 134 aa0.66□□□□□ -2.3
COPS3-213ENST00000577210 WHAMMP3Q1A5X7 153 aa0.66□□□□□ -2.3
COPS3-213ENST00000577210 C9orf116Q5BN46 136 aaPredicted RBP0.66□□□□□ -2.3
COPS3-213ENST00000577210 C6orf52Q5T4I8 152 aa0.66□□□□□ -2.3
COPS3-213ENST00000577210 PLAC4Q8WY50 150 aa0.66□□□□□ -2.3
COPS3-213ENST00000577210 DSCR8Q96T75 97 aa0.66□□□□□ -2.3
COPS3-213ENST00000577210 AGPAT4-IT1Q9H0P7 198 aa0.66□□□□□ -2.3
COPS3-213ENST00000577210 TMEM14BQ9NUH8 114 aa0.66□□□□□ -2.3
COPS3-213ENST00000577210 FAIMQ9NVQ4 179 aa0.66□□□□□ -2.3
COPS3-213ENST00000577210 COA4Q9NYJ1 87 aa0.66□□□□□ -2.3
COPS3-213ENST00000577210 KTN1Q86UP2 1357 aaKnown RBP0.66□□□□□ -2.3
COPS3-213ENST00000577210 NALCNQ8IZF0 1738 aa0.66□□□□□ -2.3
COPS3-213ENST00000577210 MYO18AQ92614 2054 aaKnown RBP0.66□□□□□ -2.3
COPS3-213ENST00000577210 ZNF518AQ6AHZ1 1483 aa0.66□□□□□ -2.3
COPS3-213ENST00000577210 FOCADQ5VW36 1801 aa0.66□□□□□ -2.3
COPS3-213ENST00000577210 EIF4G3O43432 1585 aaKnown RBP0.66□□□□□ -2.3
COPS3-213ENST00000577210 CHD3Q12873 2000 aaKnown RBP0.65□□□□□ -2.3
COPS3-213ENST00000577210 CUL7Q14999 1698 aa0.65□□□□□ -2.3
COPS3-213ENST00000577210 CEP162Q5TB80 1403 aa0.65□□□□□ -2.3
COPS3-213ENST00000577210 NCOA3Q9Y6Q9 1424 aa0.65□□□□□ -2.3
COPS3-213ENST00000577210 ROS1P08922 2347 aa0.65□□□□□ -2.3
COPS3-213ENST00000577210 HELZ2Q9BYK8 2649 aaKnown RBP0.65□□□□□ -2.31
COPS3-213ENST00000577210 AKAIN1P0CW23 69 aa0.65□□□□□ -2.31
COPS3-213ENST00000577210 CCL3L1P16619 93 aa0.65□□□□□ -2.31
COPS3-213ENST00000577210 CBLN1P23435 193 aa0.65□□□□□ -2.31
COPS3-213ENST00000577210 GNGT1P63211 74 aa0.65□□□□□ -2.31
COPS3-213ENST00000577210 INSL4Q14641 139 aa0.65□□□□□ -2.31
COPS3-213ENST00000577210 NDUFA11Q86Y39 141 aa0.65□□□□□ -2.31
COPS3-213ENST00000577210 C4orf33Q8N1A6 199 aa0.65□□□□□ -2.31
COPS3-213ENST00000577210 SNRNP25Q9BV90 132 aaKnown RBP0.65□□□□□ -2.31
COPS3-213ENST00000577210 BET1LQ9NYM9 111 aa0.65□□□□□ -2.31
COPS3-213ENST00000577210 SERP1Q9Y6X1 66 aa0.65□□□□□ -2.31
COPS3-213ENST00000577210 MYH13Q9UKX3 1938 aa0.65□□□□□ -2.31
COPS3-213ENST00000577210 ZGRF1Q86YA3 2104 aa0.65□□□□□ -2.31
COPS3-213ENST00000577210 PRRC2BQ5JSZ5 2229 aaKnown RBP0.65□□□□□ -2.31
COPS3-213ENST00000577210 TENM1Q9UKZ4 2725 aa0.65□□□□□ -2.31
COPS3-213ENST00000577210 NCOA6Q14686 2063 aaPredicted RBP0.65□□□□□ -2.31
COPS3-213ENST00000577210 FLG2Q5D862 2391 aaPredicted RBP0.64□□□□□ -2.31
COPS3-213ENST00000577210 PPIP5K1Q6PFW1 1433 aa0.64□□□□□ -2.31
COPS3-213ENST00000577210 CASKIN1Q8WXD9 1431 aa0.64□□□□□ -2.31
COPS3-213ENST00000577210 LAMA4Q16363 1823 aa0.64□□□□□ -2.31
COPS3-213ENST00000577210 CNTRLQ7Z7A1 2325 aa0.64□□□□□ -2.31
COPS3-213ENST00000577210 TRBV10-3A0A0K0K1G6 114 aa0.64□□□□□ -2.31
COPS3-213ENST00000577210 SMIM31A0A1B0GVY4 71 aa0.64□□□□□ -2.31
COPS3-213ENST00000577210 MCRIP1C9JLW8 97 aa0.64□□□□□ -2.31
COPS3-213ENST00000577210 K7EIL1 84 aa0.64□□□□□ -2.31
COPS3-213ENST00000577210 IFNA17P01571 189 aa0.64□□□□□ -2.31
COPS3-213ENST00000577210 UBE2D1P51668 147 aa0.64□□□□□ -2.31
COPS3-213ENST00000577210 ZNF137PP52743 207 aa0.64□□□□□ -2.31
COPS3-213ENST00000577210 ELOF1P60002 83 aaKnown RBP0.64□□□□□ -2.31
COPS3-213ENST00000577210 CATR1Q13166 79 aa0.64□□□□□ -2.31
COPS3-213ENST00000577210 Q6AWC8 147 aa0.64□□□□□ -2.31
COPS3-213ENST00000577210 COX7B2Q8TF08 81 aa0.64□□□□□ -2.31
COPS3-213ENST00000577210 C2orf88Q9BSF0 95 aa0.64□□□□□ -2.31
COPS3-213ENST00000577210 RERGLQ9H628 205 aa0.64□□□□□ -2.31
COPS3-213ENST00000577210 NAA60Q9H7X0 242 aa0.64□□□□□ -2.31
COPS3-213ENST00000577210 GNG8Q9UK08 70 aa0.64□□□□□ -2.31
COPS3-213ENST00000577210 ANKRD36BQ8N2N9 1353 aa0.64□□□□□ -2.31
COPS3-213ENST00000577210 RBBP6Q7Z6E9 1792 aaKnown RBP0.64□□□□□ -2.31
COPS3-213ENST00000577210 CITO14578 2027 aa0.64□□□□□ -2.31
COPS3-213ENST00000577210 MYH6P13533 1939 aa0.64□□□□□ -2.31
COPS3-213ENST00000577210 AFDNP55196 1824 aaKnown RBP0.64□□□□□ -2.31
COPS3-213ENST00000577210 SMARCA2P51531 1590 aa0.63□□□□□ -2.31
COPS3-213ENST00000577210 BCL9LQ86UU0 1499 aa0.63□□□□□ -2.31
COPS3-213ENST00000577210 WDR7Q9Y4E6 1490 aa0.63□□□□□ -2.31
COPS3-213ENST00000577210 CCNB3Q8WWL7 1395 aa0.63□□□□□ -2.31
COPS3-213ENST00000577210 RBAKDNA6NC62 111 aa0.63□□□□□ -2.31
COPS3-213ENST00000577210 ATP6V1G2-DDX39BF2Z307 99 aa0.63□□□□□ -2.31
COPS3-213ENST00000577210 FGF7P21781 194 aa0.63□□□□□ -2.31
COPS3-213ENST00000577210 GNG2P59768 71 aa0.63□□□□□ -2.31
COPS3-213ENST00000577210 GNG11P61952 73 aa0.63□□□□□ -2.31
COPS3-213ENST00000577210 PRB3Q04118 309 aaPredicted RBP0.63□□□□□ -2.31
COPS3-213ENST00000577210 SSBP1Q04837 148 aaKnown RBP0.63□□□□□ -2.31
COPS3-213ENST00000577210 FAM74A4Q5TZK3 123 aa0.63□□□□□ -2.31
COPS3-213ENST00000577210 MRPL54Q6P161 138 aaKnown RBP0.63□□□□□ -2.31
COPS3-213ENST00000577210 C10orf99Q6UWK7 81 aa0.63□□□□□ -2.31
COPS3-213ENST00000577210 Q8N8P6 123 aa0.63□□□□□ -2.31
COPS3-213ENST00000577210 PPP1R1CQ8WVI7 109 aa0.63□□□□□ -2.31
COPS3-213ENST00000577210 QRICH2Q9H0J4 1663 aa0.62□□□□□ -2.31
COPS3-213ENST00000577210 MYOM2P54296 1465 aa0.62□□□□□ -2.31
COPS3-213ENST00000577210 NLRP1Q9C000 1473 aa0.62□□□□□ -2.31
COPS3-213ENST00000577210 NRXN2Q9P2S2 1712 aa0.62□□□□□ -2.31
COPS3-213ENST00000577210 A0A087WTM6 91 aa0.62□□□□□ -2.31
COPS3-213ENST00000577210 TRAV13-2A0A0B4J235 113 aa0.62□□□□□ -2.31
COPS3-213ENST00000577210 F2Z2F3 143 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms