RNA–Protein interactions for RNA: ENST00000566582.1

LINC01541-201, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 2

Gene LINC01541, Length 2,414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-201ENST00000566582 NXPH4O95158 308 aa6.48□□□□□ -1.37
LINC01541-201ENST00000566582 HLA-DRB4P13762 266 aa6.48□□□□□ -1.37
LINC01541-201ENST00000566582 DEFB114Q30KQ6 69 aa6.48□□□□□ -1.37
LINC01541-201ENST00000566582 AMTNQ6UX39 209 aa6.48□□□□□ -1.37
LINC01541-201ENST00000566582 ZNF418Q8TF45 676 aaPredicted RBP6.48□□□□□ -1.37
LINC01541-201ENST00000566582 RAX2Q96IS3 184 aa6.48□□□□□ -1.37
LINC01541-201ENST00000566582 HLA-DRB4X5D2U9 266 aa6.48□□□□□ -1.37
LINC01541-201ENST00000566582 NF1P21359 2839 aa6.48□□□□□ -1.37
LINC01541-201ENST00000566582 H3BMM0 161 aa6.48□□□□□ -1.37
LINC01541-201ENST00000566582 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.48□□□□□ -1.37
LINC01541-201ENST00000566582 ZNF56Q15929 161 aa6.48□□□□□ -1.37
LINC01541-201ENST00000566582 C9orf85Q96MD7 179 aa6.48□□□□□ -1.37
LINC01541-201ENST00000566582 CITED2Q99967 270 aaPredicted RBP6.48□□□□□ -1.37
LINC01541-201ENST00000566582 CSTL1Q9H114 145 aa6.48□□□□□ -1.37
LINC01541-201ENST00000566582 UNC79Q9P2D8 2635 aa6.48□□□□□ -1.37
LINC01541-201ENST00000566582 TRGV11A0A075B6L2 103 aa6.47□□□□□ -1.37
LINC01541-201ENST00000566582 TRAV2A0A0B4J234 112 aa6.47□□□□□ -1.37
LINC01541-201ENST00000566582 COX8AP10176 69 aa6.47□□□□□ -1.37
LINC01541-201ENST00000566582 NMUP48645 174 aa6.47□□□□□ -1.37
LINC01541-201ENST00000566582 ZNF876PQ49A33 203 aa6.47□□□□□ -1.37
LINC01541-201ENST00000566582 LINC01006Q8NI28 216 aa6.47□□□□□ -1.37
LINC01541-201ENST00000566582 MAP6D1Q9H9H5 199 aa6.47□□□□□ -1.37
LINC01541-201ENST00000566582 IGKCP01834 107 aa6.47□□□□□ -1.37
LINC01541-201ENST00000566582 RNASE1P07998 156 aaKnown RBP6.47□□□□□ -1.37
LINC01541-201ENST00000566582 MPV17L2Q567V2 206 aa6.47□□□□□ -1.37
LINC01541-201ENST00000566582 SUMO4Q6EEV6 95 aa6.47□□□□□ -1.37
LINC01541-201ENST00000566582 NEGR1Q7Z3B1 354 aa6.47□□□□□ -1.37
LINC01541-201ENST00000566582 DEFB104AQ8WTQ1 72 aa6.47□□□□□ -1.37
LINC01541-201ENST00000566582 SCGB3A1Q96QR1 104 aa6.47□□□□□ -1.37
LINC01541-201ENST00000566582 TSSC4Q9Y5U2 329 aaPredicted RBP6.47□□□□□ -1.37
LINC01541-201ENST00000566582 KIF25-AS1Q9Y6Z4 181 aa6.47□□□□□ -1.37
LINC01541-201ENST00000566582 MTORP42345 2549 aa6.46□□□□□ -1.37
LINC01541-201ENST00000566582 WNK1Q9H4A3 2382 aa6.46□□□□□ -1.37
LINC01541-201ENST00000566582 K7EMI3 77 aa6.46□□□□□ -1.38
LINC01541-201ENST00000566582 ZNF25P17030 456 aaPredicted RBP6.46□□□□□ -1.38
LINC01541-201ENST00000566582 G0S2P27469 103 aa6.46□□□□□ -1.38
LINC01541-201ENST00000566582 SPAG8Q99932 426 aaPredicted RBP6.46□□□□□ -1.38
LINC01541-201ENST00000566582 SMR3AQ99954 134 aa6.46□□□□□ -1.38
LINC01541-201ENST00000566582 TMEM160Q9NX00 188 aa6.46□□□□□ -1.38
LINC01541-201ENST00000566582 SETD2Q9BYW2 2564 aaPredicted RBP6.46□□□□□ -1.38
LINC01541-201ENST00000566582 DPM2O94777 84 aa6.46□□□□□ -1.38
LINC01541-201ENST00000566582 RBMY1A1P0DJD3 496 aaKnown RBP6.46□□□□□ -1.38
LINC01541-201ENST00000566582 RBMY1CP0DJD4 496 aa6.46□□□□□ -1.38
LINC01541-201ENST00000566582 LINC00315P59091 139 aa6.46□□□□□ -1.38
LINC01541-201ENST00000566582 RBMY1FQ15415 496 aaKnown RBP6.46□□□□□ -1.38
LINC01541-201ENST00000566582 CUBNO60494 3623 aa6.46□□□□□ -1.38
LINC01541-201ENST00000566582 FASNP49327 2511 aaKnown RBP6.45□□□□□ -1.38
LINC01541-201ENST00000566582 C2orf66Q6UXQ4 117 aa6.45□□□□□ -1.38
LINC01541-201ENST00000566582 TOMM6Q96B49 74 aa6.45□□□□□ -1.38
LINC01541-201ENST00000566582 KIR2DL4Q99706 377 aa6.45□□□□□ -1.38
LINC01541-201ENST00000566582 C12orf54Q6X4T0 127 aa6.45□□□□□ -1.38
LINC01541-201ENST00000566582 STHQ8IWL8 128 aa6.45□□□□□ -1.38
LINC01541-201ENST00000566582 POM121L12Q8N7R1 296 aa6.45□□□□□ -1.38
LINC01541-201ENST00000566582 LINC01587Q99440 93 aa6.45□□□□□ -1.38
LINC01541-201ENST00000566582 MRPL35Q9NZE8 188 aaKnown RBP6.45□□□□□ -1.38
LINC01541-201ENST00000566582 GCN1Q92616 2671 aaKnown RBP6.45□□□□□ -1.38
LINC01541-201ENST00000566582 RBMY1BA6NDE4 496 aaKnown RBP6.44□□□□□ -1.38
LINC01541-201ENST00000566582 RBMY1EA6NEQ0 496 aaKnown RBP6.44□□□□□ -1.38
LINC01541-201ENST00000566582 SDHAF1A6NFY7 115 aa6.44□□□□□ -1.38
LINC01541-201ENST00000566582 VCYO14598 125 aa6.44□□□□□ -1.38
LINC01541-201ENST00000566582 PRM2P04554 102 aa6.44□□□□□ -1.38
LINC01541-201ENST00000566582 RBMY1DP0C7P1 496 aaKnown RBP6.44□□□□□ -1.38
LINC01541-201ENST00000566582 FHL3Q13643 280 aa6.44□□□□□ -1.38
LINC01541-201ENST00000566582 C16orf95Q9H693 158 aa6.44□□□□□ -1.38
LINC01541-201ENST00000566582 ZNF256Q9Y2P7 627 aaPredicted RBP6.44□□□□□ -1.38
LINC01541-201ENST00000566582 CHTOPQ9Y3Y2 248 aaKnown RBP6.44□□□□□ -1.38
LINC01541-201ENST00000566582 A0A087WX48 190 aa6.44□□□□□ -1.38
LINC01541-201ENST00000566582 SAP30O75446 220 aa6.44□□□□□ -1.38
LINC01541-201ENST00000566582 CRYGDP07320 174 aa6.44□□□□□ -1.38
LINC01541-201ENST00000566582 HILS1P60008 231 aa6.44□□□□□ -1.38
LINC01541-201ENST00000566582 ZC2HC1BQ5TFG8 222 aa6.44□□□□□ -1.38
LINC01541-201ENST00000566582 GTSCR1Q86UQ5 136 aa6.44□□□□□ -1.38
LINC01541-201ENST00000566582 TMEM208Q9BTX3 173 aa6.44□□□□□ -1.38
LINC01541-201ENST00000566582 HECTD1Q9ULT8 2610 aa6.43□□□□□ -1.38
LINC01541-201ENST00000566582 IGHV3-73A0A0B4J1V6 119 aa6.43□□□□□ -1.38
LINC01541-201ENST00000566582 TRAV25A0A0B4J276 109 aa6.43□□□□□ -1.38
LINC01541-201ENST00000566582 OR11H12B2RN74 326 aa6.43□□□□□ -1.38
LINC01541-201ENST00000566582 NSUN5P1Q3KNT7 163 aa6.43□□□□□ -1.38
LINC01541-201ENST00000566582 ZMAT4Q9H898 229 aa6.43□□□□□ -1.38
LINC01541-201ENST00000566582 XCL2Q9UBD3 114 aa6.43□□□□□ -1.38
LINC01541-201ENST00000566582 HHLA3Q9XRX5 114 aa6.43□□□□□ -1.38
LINC01541-201ENST00000566582 CYSLTR1Q9Y271 337 aa6.43□□□□□ -1.38
LINC01541-201ENST00000566582 HIVEP2P31629 2446 aa6.43□□□□□ -1.38
LINC01541-201ENST00000566582 IGHV3OR16-12A0A075B7B8 117 aa6.42□□□□□ -1.38
LINC01541-201ENST00000566582 H7C1H1 209 aa6.42□□□□□ -1.38
LINC01541-201ENST00000566582 INSP01308 110 aa6.42□□□□□ -1.38
LINC01541-201ENST00000566582 PLNP26678 52 aa6.42□□□□□ -1.38
LINC01541-201ENST00000566582 POLR2KP53803 58 aaKnown RBP6.42□□□□□ -1.38
LINC01541-201ENST00000566582 ZNF415Q09FC8 603 aa6.42□□□□□ -1.38
LINC01541-201ENST00000566582 ODF3L2Q3SX64 289 aa6.42□□□□□ -1.38
LINC01541-201ENST00000566582 ERASQ7Z444 233 aa6.42□□□□□ -1.38
LINC01541-201ENST00000566582 TRPT1Q86TN4 253 aaKnown RBP6.42□□□□□ -1.38
LINC01541-201ENST00000566582 PCP2Q8IVA1 136 aa6.42□□□□□ -1.38
LINC01541-201ENST00000566582 BOD1L2Q8IYS8 172 aa6.42□□□□□ -1.38
LINC01541-201ENST00000566582 SPXQ9BT56 116 aa6.42□□□□□ -1.38
LINC01541-201ENST00000566582 TP53TG1Q9Y2A0 90 aa6.42□□□□□ -1.38
LINC01541-201ENST00000566582 A8MTW9 85 aa6.42□□□□□ -1.38
LINC01541-201ENST00000566582 M0QY20 66 aa6.42□□□□□ -1.38
LINC01541-201ENST00000566582 FGF6P10767 208 aa6.42□□□□□ -1.38
LINC01541-201ENST00000566582 BVES-AS1Q5T3Y7 98 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms