RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 LINC00315P59091 139 aa14.24□□□□□ -0.13
CLN6-205ENST00000564846 SHISA2Q6UWI4 295 aa14.24□□□□□ -0.13
CLN6-205ENST00000564846 C11orf72Q8NBR9 251 aa14.24□□□□□ -0.13
CLN6-205ENST00000564846 GOLT1BQ9Y3E0 138 aa14.24□□□□□ -0.13
CLN6-205ENST00000564846 M0R2P5 195 aa14.23□□□□□ -0.13
CLN6-205ENST00000564846 PPP1R17O96001 155 aa14.23□□□□□ -0.13
CLN6-205ENST00000564846 TMEM158Q8WZ71 300 aa14.23□□□□□ -0.13
CLN6-205ENST00000564846 SPXQ9BT56 116 aa14.23□□□□□ -0.13
CLN6-205ENST00000564846 JPT2Q9H910 190 aa14.23□□□□□ -0.13
CLN6-205ENST00000564846 NXT2Q9NPJ8 142 aaKnown RBP14.23□□□□□ -0.13
CLN6-205ENST00000564846 NIT2Q9NQR4 276 aa14.23□□□□□ -0.13
CLN6-205ENST00000564846 PRM2P04554 102 aa14.22□□□□□ -0.13
CLN6-205ENST00000564846 IGLL1P15814 213 aa14.22□□□□□ -0.13
CLN6-205ENST00000564846 IGHV3OR16-12A0A075B7B8 117 aa14.22□□□□□ -0.13
CLN6-205ENST00000564846 A0A087WWL8 130 aa14.22□□□□□ -0.13
CLN6-205ENST00000564846 PMCHL1Q16048 86 aa14.22□□□□□ -0.13
CLN6-205ENST00000564846 C12orf54Q6X4T0 127 aa14.22□□□□□ -0.13
CLN6-205ENST00000564846 LINC01546A6NGU7 62 aa14.21□□□□□ -0.13
CLN6-205ENST00000564846 CRYGDP07320 174 aa14.21□□□□□ -0.13
CLN6-205ENST00000564846 Q8N8P6 123 aa14.2□□□□□ -0.14
CLN6-205ENST00000564846 RASL10AQ92737 203 aa14.2□□□□□ -0.14
CLN6-205ENST00000564846 C20orf78Q9BR46 151 aa14.2□□□□□ -0.14
CLN6-205ENST00000564846 VWFP04275 2813 aa14.2□□□□□ -0.14
CLN6-205ENST00000564846 KRTDAPP60985 99 aa14.19□□□□□ -0.14
CLN6-205ENST00000564846 CSNK1G2-AS1Q8NCQ2 148 aa14.19□□□□□ -0.14
CLN6-205ENST00000564846 LEPROTL1O95214 131 aa14.19□□□□□ -0.14
CLN6-205ENST00000564846 SCGB1D1O95968 90 aa14.19□□□□□ -0.14
CLN6-205ENST00000564846 AZU1P20160 251 aa14.19□□□□□ -0.14
CLN6-205ENST00000564846 FAM74A4Q5TZK3 123 aa14.19□□□□□ -0.14
CLN6-205ENST00000564846 TMEM263Q8WUH6 116 aaKnown RBP14.19□□□□□ -0.14
CLN6-205ENST00000564846 NDUFAF3Q9BU61 184 aa14.19□□□□□ -0.14
CLN6-205ENST00000564846 CSTL1Q9H114 145 aa14.19□□□□□ -0.14
CLN6-205ENST00000564846 IGLV2-18A0A075B6J9 118 aa14.18□□□□□ -0.14
CLN6-205ENST00000564846 A8MWV9 139 aa14.18□□□□□ -0.14
CLN6-205ENST00000564846 F5H697 171 aa14.18□□□□□ -0.14
CLN6-205ENST00000564846 SUMO4Q6EEV6 95 aa14.18□□□□□ -0.14
CLN6-205ENST00000564846 RNASE8Q8TDE3 154 aaKnown RBP14.18□□□□□ -0.14
CLN6-205ENST00000564846 C3orf79P0CE67 100 aa14.17□□□□□ -0.14
CLN6-205ENST00000564846 SUMO2P61956 95 aaKnown RBP14.17□□□□□ -0.14
CLN6-205ENST00000564846 HSPB8Q9UJY1 196 aa14.17□□□□□ -0.14
CLN6-205ENST00000564846 CDPF1Q6NVV7 123 aa14.17□□□□□ -0.14
CLN6-205ENST00000564846 ZNF705AQ6ZN79 300 aaPredicted RBP14.17□□□□□ -0.14
CLN6-205ENST00000564846 IL17DQ8TAD2 202 aa14.17□□□□□ -0.14
CLN6-205ENST00000564846 ZNF56Q15929 161 aa14.16□□□□□ -0.14
CLN6-205ENST00000564846 RPL39LQ96EH5 51 aaKnown RBP14.16□□□□□ -0.14
CLN6-205ENST00000564846 SMIM2Q9BVW6 85 aa14.16□□□□□ -0.14
CLN6-205ENST00000564846 A0A096LNJ9 63 aa14.14□□□□□ -0.15
CLN6-205ENST00000564846 HBDP02042 147 aa14.14□□□□□ -0.15
CLN6-205ENST00000564846 BTF3P20290 206 aaKnown RBP14.14□□□□□ -0.15
CLN6-205ENST00000564846 C16orf74Q96GX8 76 aa14.14□□□□□ -0.15
CLN6-205ENST00000564846 FBN1P35555 2871 aaKnown RBP14.13□□□□□ -0.15
CLN6-205ENST00000564846 NOTCH3Q9UM47 2321 aa14.13□□□□□ -0.15
CLN6-205ENST00000564846 K7EMI3 77 aa14.13□□□□□ -0.15
CLN6-205ENST00000564846 M0QY20 66 aa14.13□□□□□ -0.15
CLN6-205ENST00000564846 RPL32P62910 135 aaKnown RBP14.13□□□□□ -0.15
CLN6-205ENST00000564846 S100A12P80511 92 aa14.13□□□□□ -0.15
CLN6-205ENST00000564846 TMEM70Q9BUB7 260 aa14.13□□□□□ -0.15
CLN6-205ENST00000564846 MRPL16Q9NX20 251 aaKnown RBP14.13□□□□□ -0.15
CLN6-205ENST00000564846 TRBV6-5A0A0K0K1A5 114 aa14.12□□□□□ -0.15
CLN6-205ENST00000564846 FCER1GP30273 86 aa14.12□□□□□ -0.15
CLN6-205ENST00000564846 RRN3P1Q2M238 152 aa14.12□□□□□ -0.15
CLN6-205ENST00000564846 UFSP1Q6NVU6 142 aa14.12□□□□□ -0.15
CLN6-205ENST00000564846 EDA2RQ9HAV5 297 aa14.12□□□□□ -0.15
CLN6-205ENST00000564846 ST20Q9HBF5 79 aa14.12□□□□□ -0.15
CLN6-205ENST00000564846 KIR2DL5BA0A0G2JN68 375 aa14.11□□□□□ -0.15
CLN6-205ENST00000564846 KIR2DL5BA0A0G2JPC4 375 aa14.11□□□□□ -0.15
CLN6-205ENST00000564846 RHODO00212 210 aa14.11□□□□□ -0.15
CLN6-205ENST00000564846 DAZ2Q13117 558 aaKnown RBP14.11□□□□□ -0.15
CLN6-205ENST00000564846 LAGE3Q14657 143 aa14.11□□□□□ -0.15
CLN6-205ENST00000564846 CFAP126Q5VTH2 177 aa14.11□□□□□ -0.15
CLN6-205ENST00000564846 KIR2DL5AQ8N109 375 aa14.11□□□□□ -0.15
CLN6-205ENST00000564846 Q8N976 141 aa14.11□□□□□ -0.15
CLN6-205ENST00000564846 KIR2DL5BQ8NHK3 375 aa14.11□□□□□ -0.15
CLN6-205ENST00000564846 MAP1LC3CQ9BXW4 147 aa14.11□□□□□ -0.15
CLN6-205ENST00000564846 TRRAPQ9Y4A5 3859 aa14.11□□□□□ -0.15
CLN6-205ENST00000564846 MAST4O15021 2626 aa14.11□□□□□ -0.15
CLN6-205ENST00000564846 H7C1H1 209 aa14.11□□□□□ -0.15
CLN6-205ENST00000564846 LGALS9BQ3B8N2 356 aa14.11□□□□□ -0.15
CLN6-205ENST00000564846 LINC00173Q6ZV60 143 aa14.11□□□□□ -0.15
CLN6-205ENST00000564846 RS1O15537 224 aa14.1□□□□□ -0.15
CLN6-205ENST00000564846 SYS1-DBNDD2H3BUS1 97 aa14.09□□□□□ -0.15
CLN6-205ENST00000564846 TCAPO15273 167 aa14.09□□□□□ -0.15
CLN6-205ENST00000564846 APOC4P55056 127 aa14.09□□□□□ -0.15
CLN6-205ENST00000564846 TRGV1A0A0A0MS02 117 aa14.09□□□□□ -0.15
CLN6-205ENST00000564846 POLR2KP53803 58 aaKnown RBP14.09□□□□□ -0.15
CLN6-205ENST00000564846 ORMDL2Q53FV1 153 aa14.09□□□□□ -0.15
CLN6-205ENST00000564846 PLAC8L1A1L4L8 177 aa14.08□□□□□ -0.16
CLN6-205ENST00000564846 VCYO14598 125 aa14.08□□□□□ -0.16
CLN6-205ENST00000564846 ZFP2Q6ZN57 461 aa14.08□□□□□ -0.16
CLN6-205ENST00000564846 TEX43Q6ZNM6 134 aa14.08□□□□□ -0.16
CLN6-205ENST00000564846 IGHV3-73A0A0B4J1V6 119 aa14.07□□□□□ -0.16
CLN6-205ENST00000564846 OXLD1Q5BKU9 147 aa14.07□□□□□ -0.16
CLN6-205ENST00000564846 PET117Q6UWS5 81 aa14.07□□□□□ -0.16
CLN6-205ENST00000564846 NOP10Q9NPE3 64 aaKnown RBP14.07□□□□□ -0.16
CLN6-205ENST00000564846 SDHAF1A6NFY7 115 aa14.06□□□□□ -0.16
CLN6-205ENST00000564846 OVOL2Q9BRP0 275 aa14.06□□□□□ -0.16
CLN6-205ENST00000564846 ZMAT5Q9UDW3 170 aaKnown RBP14.06□□□□□ -0.16
CLN6-205ENST00000564846 TRBV27A0A0K0K1C4 114 aa14.06□□□□□ -0.16
CLN6-205ENST00000564846 C20orf202A1L168 122 aa14.06□□□□□ -0.16
CLN6-205ENST00000564846 NUDT3O95989 172 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms