RNA–Protein interactions for RNA: ENST00000563455.1

SMPD3-205, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-205ENST00000563455 H7C1H1 209 aa10.15□□□□□ -0.78
SMPD3-205ENST00000563455 TCAPO15273 167 aa10.15□□□□□ -0.78
SMPD3-205ENST00000563455 CIDEAO60543 219 aa10.15□□□□□ -0.78
SMPD3-205ENST00000563455 TNFRSF6BO95407 300 aa10.15□□□□□ -0.78
SMPD3-205ENST00000563455 Q6ZQT7 251 aa10.15□□□□□ -0.78
SMPD3-205ENST00000563455 RCHY1Q96PM5 261 aa10.15□□□□□ -0.78
SMPD3-205ENST00000563455 C19orf73Q9NVV2 129 aa10.15□□□□□ -0.78
SMPD3-205ENST00000563455 RBMY1BA6NDE4 496 aaKnown RBP10.14□□□□□ -0.79
SMPD3-205ENST00000563455 RBMY1EA6NEQ0 496 aaKnown RBP10.14□□□□□ -0.79
SMPD3-205ENST00000563455 RHODO00212 210 aa10.14□□□□□ -0.79
SMPD3-205ENST00000563455 NUPR1O60356 82 aa10.14□□□□□ -0.79
SMPD3-205ENST00000563455 PRB2P02812 416 aaPredicted RBP10.14□□□□□ -0.79
SMPD3-205ENST00000563455 RBMY1DP0C7P1 496 aaKnown RBP10.14□□□□□ -0.79
SMPD3-205ENST00000563455 SSTP61278 116 aa10.14□□□□□ -0.79
SMPD3-205ENST00000563455 ZNF876PQ49A33 203 aa10.14□□□□□ -0.79
SMPD3-205ENST00000563455 EDA2RQ9HAV5 297 aa10.14□□□□□ -0.79
SMPD3-205ENST00000563455 TIMM8BQ9Y5J9 83 aaPredicted RBP10.14□□□□□ -0.79
SMPD3-205ENST00000563455 LEPROTL1O95214 131 aa10.13□□□□□ -0.79
SMPD3-205ENST00000563455 IGLL1P15814 213 aa10.13□□□□□ -0.79
SMPD3-205ENST00000563455 PYY3Q5JQD4 70 aa10.13□□□□□ -0.79
SMPD3-205ENST00000563455 C14orf178Q8N769 122 aaPredicted RBP10.13□□□□□ -0.79
SMPD3-205ENST00000563455 Q8N8P6 123 aa10.13□□□□□ -0.79
SMPD3-205ENST00000563455 KIR2DL5BA0A0G2JN68 375 aa10.12□□□□□ -0.79
SMPD3-205ENST00000563455 KIR2DL5BA0A0G2JPC4 375 aa10.12□□□□□ -0.79
SMPD3-205ENST00000563455 LGALS9BQ3B8N2 356 aa10.12□□□□□ -0.79
SMPD3-205ENST00000563455 HIST2H2BDQ6DRA6 164 aa10.12□□□□□ -0.79
SMPD3-205ENST00000563455 KIR2DL5AQ8N109 375 aa10.12□□□□□ -0.79
SMPD3-205ENST00000563455 KIR2DL5BQ8NHK3 375 aa10.12□□□□□ -0.79
SMPD3-205ENST00000563455 MDFICQ9P1T7 246 aa10.12□□□□□ -0.79
SMPD3-205ENST00000563455 KIF25-AS1Q9Y6Z4 181 aa10.12□□□□□ -0.79
SMPD3-205ENST00000563455 C20orf202A1L168 122 aa10.11□□□□□ -0.79
SMPD3-205ENST00000563455 NPYP01303 97 aa10.11□□□□□ -0.79
SMPD3-205ENST00000563455 BTF3P20290 206 aaKnown RBP10.11□□□□□ -0.79
SMPD3-205ENST00000563455 PMCHL1Q16048 86 aa10.11□□□□□ -0.79
SMPD3-205ENST00000563455 ORMDL2Q53FV1 153 aa10.11□□□□□ -0.79
SMPD3-205ENST00000563455 DEFB121Q5J5C9 76 aa10.11□□□□□ -0.79
SMPD3-205ENST00000563455 TMEM263Q8WUH6 116 aaKnown RBP10.11□□□□□ -0.79
SMPD3-205ENST00000563455 CSTL1Q9H114 145 aa10.11□□□□□ -0.79
SMPD3-205ENST00000563455 NIT2Q9NQR4 276 aa10.11□□□□□ -0.79
SMPD3-205ENST00000563455 XCL2Q9UBD3 114 aa10.11□□□□□ -0.79
SMPD3-205ENST00000563455 PRKDCP78527 4128 aaKnown RBP10.1□□□□□ -0.79
SMPD3-205ENST00000563455 IGHV1-24A0A0C4DH33 117 aa10.1□□□□□ -0.79
SMPD3-205ENST00000563455 TRBV6-5A0A0K0K1A5 114 aa10.1□□□□□ -0.79
SMPD3-205ENST00000563455 SMIM9A6NGZ8 99 aa10.1□□□□□ -0.79
SMPD3-205ENST00000563455 SCGB1D1O95968 90 aa10.1□□□□□ -0.79
SMPD3-205ENST00000563455 HBDP02042 147 aa10.1□□□□□ -0.79
SMPD3-205ENST00000563455 IFI27P40305 119 aaPredicted RBP10.1□□□□□ -0.79
SMPD3-205ENST00000563455 FXYD7P58549 80 aa10.1□□□□□ -0.79
SMPD3-205ENST00000563455 SUMO2P61956 95 aaKnown RBP10.1□□□□□ -0.79
SMPD3-205ENST00000563455 ZNF124Q15973 351 aa10.1□□□□□ -0.79
SMPD3-205ENST00000563455 ZFP2Q6ZN57 461 aa10.1□□□□□ -0.79
SMPD3-205ENST00000563455 NRACQ8N912 160 aa10.1□□□□□ -0.79
SMPD3-205ENST00000563455 RASL10AQ92737 203 aa10.1□□□□□ -0.79
SMPD3-205ENST00000563455 C16orf74Q96GX8 76 aa10.1□□□□□ -0.79
SMPD3-205ENST00000563455 URB1-AS1Q96HZ7 61 aa10.1□□□□□ -0.79
SMPD3-205ENST00000563455 TMEM70Q9BUB7 260 aa10.1□□□□□ -0.79
SMPD3-205ENST00000563455 MAP1LC3CQ9BXW4 147 aa10.1□□□□□ -0.79
SMPD3-205ENST00000563455 RBMY1A1P0DJD3 496 aaKnown RBP10.09□□□□□ -0.79
SMPD3-205ENST00000563455 RBMY1CP0DJD4 496 aa10.09□□□□□ -0.79
SMPD3-205ENST00000563455 APOC4P55056 127 aa10.09□□□□□ -0.79
SMPD3-205ENST00000563455 LINC00315P59091 139 aa10.09□□□□□ -0.79
SMPD3-205ENST00000563455 DAZ2Q13117 558 aaKnown RBP10.09□□□□□ -0.79
SMPD3-205ENST00000563455 RBMY1FQ15415 496 aaKnown RBP10.09□□□□□ -0.79
SMPD3-205ENST00000563455 PET117Q6UWS5 81 aa10.09□□□□□ -0.79
SMPD3-205ENST00000563455 Q6ZWC4 215 aa10.09□□□□□ -0.79
SMPD3-205ENST00000563455 SPATA12Q7Z6I5 190 aa10.09□□□□□ -0.79
SMPD3-205ENST00000563455 ST20Q9HBF5 79 aa10.09□□□□□ -0.79
SMPD3-205ENST00000563455 LOC389332A0A1B0GUA5 103 aa10.08□□□□□ -0.8
SMPD3-205ENST00000563455 F5H697 171 aa10.08□□□□□ -0.8
SMPD3-205ENST00000563455 VCYO14598 125 aa10.08□□□□□ -0.8
SMPD3-205ENST00000563455 MGPP08493 103 aa10.08□□□□□ -0.8
SMPD3-205ENST00000563455 FCER1GP30273 86 aa10.08□□□□□ -0.8
SMPD3-205ENST00000563455 LAGE3Q14657 143 aa10.08□□□□□ -0.8
SMPD3-205ENST00000563455 C1orf158Q8N1D5 194 aa10.08□□□□□ -0.8
SMPD3-205ENST00000563455 FAM19A2Q8N3H0 131 aa10.08□□□□□ -0.8
SMPD3-205ENST00000563455 C11orf72Q8NBR9 251 aa10.08□□□□□ -0.8
SMPD3-205ENST00000563455 SMIM2Q9BVW6 85 aa10.08□□□□□ -0.8
SMPD3-205ENST00000563455 NOTCH3Q9UM47 2321 aa10.07□□□□□ -0.8
SMPD3-205ENST00000563455 NCR2O95944 276 aa10.07□□□□□ -0.8
SMPD3-205ENST00000563455 CRYGDP07320 174 aa10.07□□□□□ -0.8
SMPD3-205ENST00000563455 HTN1P15515 57 aa10.07□□□□□ -0.8
SMPD3-205ENST00000563455 KRTDAPP60985 99 aa10.07□□□□□ -0.8
SMPD3-205ENST00000563455 RRN3P1Q2M238 152 aa10.07□□□□□ -0.8
SMPD3-205ENST00000563455 ZNF705AQ6ZN79 300 aaPredicted RBP10.07□□□□□ -0.8
SMPD3-205ENST00000563455 KIR2DL4Q99706 377 aa10.07□□□□□ -0.8
SMPD3-205ENST00000563455 SMKR1H3BMG3 65 aa10.06□□□□□ -0.8
SMPD3-205ENST00000563455 ATP5LO75964 103 aa10.06□□□□□ -0.8
SMPD3-205ENST00000563455 EGFEM1PQ0D2K5 195 aa10.06□□□□□ -0.8
SMPD3-205ENST00000563455 CSNK1G2-AS1Q8NCQ2 148 aa10.06□□□□□ -0.8
SMPD3-205ENST00000563455 RNASE8Q8TDE3 154 aaKnown RBP10.06□□□□□ -0.8
SMPD3-205ENST00000563455 DNAJC30Q96LL9 226 aa10.06□□□□□ -0.8
SMPD3-205ENST00000563455 IGLV2-18A0A075B6J9 118 aa10.05□□□□□ -0.8
SMPD3-205ENST00000563455 TSTD3H0UI37 97 aa10.05□□□□□ -0.8
SMPD3-205ENST00000563455 C3orf79P0CE67 100 aa10.05□□□□□ -0.8
SMPD3-205ENST00000563455 ZNF56Q15929 161 aa10.05□□□□□ -0.8
SMPD3-205ENST00000563455 IL17DQ8TAD2 202 aa10.05□□□□□ -0.8
SMPD3-205ENST00000563455 SORL1Q92673 2214 aa10.05□□□□□ -0.8
SMPD3-205ENST00000563455 TRBV27A0A0K0K1C4 114 aa10.04□□□□□ -0.8
SMPD3-205ENST00000563455 SYS1-DBNDD2H3BUS1 97 aa10.04□□□□□ -0.8
SMPD3-205ENST00000563455 K7EIL1 84 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms