RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 AP5S1Q9NUS5 200 aa10.06□□□□□ -0.8
TPM1-215ENST00000558868 PRSS47A8MTI9 375 aa10.05□□□□□ -0.8
TPM1-215ENST00000558868 M0R2P5 195 aa10.05□□□□□ -0.8
TPM1-215ENST00000558868 SPRY2O43597 315 aa10.05□□□□□ -0.8
TPM1-215ENST00000558868 RPL35AP18077 110 aaKnown RBP10.05□□□□□ -0.8
TPM1-215ENST00000558868 JOSD1Q15040 202 aaPredicted RBP10.05□□□□□ -0.8
TPM1-215ENST00000558868 C1orf158Q8N1D5 194 aa10.05□□□□□ -0.8
TPM1-215ENST00000558868 DEFB125Q8N687 156 aa10.05□□□□□ -0.8
TPM1-215ENST00000558868 URB1-AS1Q96HZ7 61 aa10.05□□□□□ -0.8
TPM1-215ENST00000558868 KIF25-AS1Q9Y6Z4 181 aa10.05□□□□□ -0.8
TPM1-215ENST00000558868 LOC389332A0A1B0GUA5 103 aa10.04□□□□□ -0.8
TPM1-215ENST00000558868 IFI27P40305 119 aaPredicted RBP10.04□□□□□ -0.8
TPM1-215ENST00000558868 PYY3Q5JQD4 70 aa10.04□□□□□ -0.8
TPM1-215ENST00000558868 FAM19A2Q8N3H0 131 aa10.04□□□□□ -0.8
TPM1-215ENST00000558868 C20orf78Q9BR46 151 aa10.04□□□□□ -0.8
TPM1-215ENST00000558868 WFDC10AQ9H1F0 79 aa10.04□□□□□ -0.8
TPM1-215ENST00000558868 ZMAT5Q9UDW3 170 aaKnown RBP10.04□□□□□ -0.8
TPM1-215ENST00000558868 MEGF8Q7Z7M0 2845 aa10.04□□□□□ -0.8
TPM1-215ENST00000558868 A8MWV9 139 aa10.03□□□□□ -0.8
TPM1-215ENST00000558868 IGLL1P15814 213 aa10.03□□□□□ -0.8
TPM1-215ENST00000558868 Q8N8P6 123 aa10.03□□□□□ -0.8
TPM1-215ENST00000558868 NRACQ8N912 160 aa10.03□□□□□ -0.8
TPM1-215ENST00000558868 CSTL1Q9H114 145 aa10.03□□□□□ -0.8
TPM1-215ENST00000558868 NOTCH1P46531 2555 aa10.02□□□□□ -0.81
TPM1-215ENST00000558868 IGHV3OR16-12A0A075B7B8 117 aa10.02□□□□□ -0.81
TPM1-215ENST00000558868 IGHV1-24A0A0C4DH33 117 aa10.02□□□□□ -0.81
TPM1-215ENST00000558868 LINC01546A6NGU7 62 aa10.02□□□□□ -0.81
TPM1-215ENST00000558868 F5H697 171 aa10.02□□□□□ -0.81
TPM1-215ENST00000558868 LINC00315P59091 139 aa10.02□□□□□ -0.81
TPM1-215ENST00000558868 Q6ZWC4 215 aa10.02□□□□□ -0.81
TPM1-215ENST00000558868 C11orf72Q8NBR9 251 aa10.02□□□□□ -0.81
TPM1-215ENST00000558868 TMEM263Q8WUH6 116 aaKnown RBP10.02□□□□□ -0.81
TPM1-215ENST00000558868 HSPB8Q9UJY1 196 aa10.02□□□□□ -0.81
TPM1-215ENST00000558868 MUC4Q99102 2169 aa10.02□□□□□ -0.81
TPM1-215ENST00000558868 A0A087WWL8 130 aa10.01□□□□□ -0.81
TPM1-215ENST00000558868 TRAV26-2A0A0B4J265 109 aa10.01□□□□□ -0.81
TPM1-215ENST00000558868 K7EMI3 77 aa10.01□□□□□ -0.81
TPM1-215ENST00000558868 LEPROTL1O95214 131 aa10.01□□□□□ -0.81
TPM1-215ENST00000558868 GIG44P09565 113 aaPredicted RBP10.01□□□□□ -0.81
TPM1-215ENST00000558868 GATA1P15976 413 aaPredicted RBP10.01□□□□□ -0.81
TPM1-215ENST00000558868 C16orf74Q96GX8 76 aa10.01□□□□□ -0.81
TPM1-215ENST00000558868 KIR2DL5BA0A0G2JN68 375 aa10□□□□□ -0.81
TPM1-215ENST00000558868 KIR2DL5BA0A0G2JPC4 375 aa10□□□□□ -0.81
TPM1-215ENST00000558868 H7C1H1 209 aa10□□□□□ -0.81
TPM1-215ENST00000558868 RHODO00212 210 aa10□□□□□ -0.81
TPM1-215ENST00000558868 SCGB1D1O95968 90 aa10□□□□□ -0.81
TPM1-215ENST00000558868 CRYGDP07320 174 aa10□□□□□ -0.81
TPM1-215ENST00000558868 KRTDAPP60985 99 aa10□□□□□ -0.81
TPM1-215ENST00000558868 RPL32P62910 135 aaKnown RBP10□□□□□ -0.81
TPM1-215ENST00000558868 ZNF56Q15929 161 aa10□□□□□ -0.81
TPM1-215ENST00000558868 FAM74A4Q5TZK3 123 aa10□□□□□ -0.81
TPM1-215ENST00000558868 KIR2DL5AQ8N109 375 aa10□□□□□ -0.81
TPM1-215ENST00000558868 CSNK1G2-AS1Q8NCQ2 148 aa10□□□□□ -0.81
TPM1-215ENST00000558868 KIR2DL5BQ8NHK3 375 aa10□□□□□ -0.81
TPM1-215ENST00000558868 RASL10AQ92737 203 aa10□□□□□ -0.81
TPM1-215ENST00000558868 JPT2Q9H910 190 aa10□□□□□ -0.81
TPM1-215ENST00000558868 NIT2Q9NQR4 276 aa10□□□□□ -0.81
TPM1-215ENST00000558868 GAS8-AS1O95177 125 aa9.99□□□□□ -0.81
TPM1-215ENST00000558868 APOC4P55056 127 aa9.99□□□□□ -0.81
TPM1-215ENST00000558868 SUMO2P61956 95 aaKnown RBP9.99□□□□□ -0.81
TPM1-215ENST00000558868 S100A12P80511 92 aa9.99□□□□□ -0.81
TPM1-215ENST00000558868 RRN3P1Q2M238 152 aa9.99□□□□□ -0.81
TPM1-215ENST00000558868 SUMO4Q6EEV6 95 aa9.99□□□□□ -0.81
TPM1-215ENST00000558868 ZNF705AQ6ZN79 300 aaPredicted RBP9.99□□□□□ -0.81
TPM1-215ENST00000558868 IL17DQ8TAD2 202 aa9.99□□□□□ -0.81
TPM1-215ENST00000558868 RNASE8Q8TDE3 154 aaKnown RBP9.99□□□□□ -0.81
TPM1-215ENST00000558868 SMIM2Q9BVW6 85 aa9.99□□□□□ -0.81
TPM1-215ENST00000558868 ST20Q9HBF5 79 aa9.99□□□□□ -0.81
TPM1-215ENST00000558868 HBDP02042 147 aa9.98□□□□□ -0.81
TPM1-215ENST00000558868 AZU1P20160 251 aa9.98□□□□□ -0.81
TPM1-215ENST00000558868 BTF3P20290 206 aaKnown RBP9.98□□□□□ -0.81
TPM1-215ENST00000558868 PMCHL1Q16048 86 aa9.98□□□□□ -0.81
TPM1-215ENST00000558868 LGALS9BQ3B8N2 356 aa9.98□□□□□ -0.81
TPM1-215ENST00000558868 KRTAP17-1Q9BYP8 105 aa9.98□□□□□ -0.81
TPM1-215ENST00000558868 EDA2RQ9HAV5 297 aa9.98□□□□□ -0.81
TPM1-215ENST00000558868 NBEAL2Q6ZNJ1 2754 aa9.97□□□□□ -0.81
TPM1-215ENST00000558868 IGLV2-18A0A075B6J9 118 aa9.97□□□□□ -0.81
TPM1-215ENST00000558868 TRBV6-5A0A0K0K1A5 114 aa9.97□□□□□ -0.81
TPM1-215ENST00000558868 RS1O15537 224 aa9.97□□□□□ -0.81
TPM1-215ENST00000558868 C3orf79P0CE67 100 aa9.97□□□□□ -0.81
TPM1-215ENST00000558868 FCER1GP30273 86 aa9.97□□□□□ -0.81
TPM1-215ENST00000558868 DAZ2Q13117 558 aaKnown RBP9.97□□□□□ -0.81
TPM1-215ENST00000558868 LAGE3Q14657 143 aa9.97□□□□□ -0.81
TPM1-215ENST00000558868 TMEM70Q9BUB7 260 aa9.97□□□□□ -0.81
TPM1-215ENST00000558868 MAP1LC3CQ9BXW4 147 aa9.97□□□□□ -0.81
TPM1-215ENST00000558868 C20orf202A1L168 122 aa9.96□□□□□ -0.82
TPM1-215ENST00000558868 SMIM9A6NGZ8 99 aa9.96□□□□□ -0.82
TPM1-215ENST00000558868 PRM2P04554 102 aa9.96□□□□□ -0.82
TPM1-215ENST00000558868 G0S2P27469 103 aa9.96□□□□□ -0.82
TPM1-215ENST00000558868 ORMDL2Q53FV1 153 aa9.96□□□□□ -0.82
TPM1-215ENST00000558868 ZFP2Q6ZN57 461 aa9.96□□□□□ -0.82
TPM1-215ENST00000558868 RPL39LQ96EH5 51 aaKnown RBP9.96□□□□□ -0.82
TPM1-215ENST00000558868 MRPL16Q9NX20 251 aaKnown RBP9.96□□□□□ -0.82
TPM1-215ENST00000558868 TRGV1A0A0A0MS02 117 aa9.95□□□□□ -0.82
TPM1-215ENST00000558868 M0QY20 66 aa9.95□□□□□ -0.82
TPM1-215ENST00000558868 VCYO14598 125 aa9.95□□□□□ -0.82
TPM1-215ENST00000558868 TCAPO15273 167 aa9.95□□□□□ -0.82
TPM1-215ENST00000558868 CIDEAO60543 219 aa9.95□□□□□ -0.82
TPM1-215ENST00000558868 CFAP126Q5VTH2 177 aa9.95□□□□□ -0.82
TPM1-215ENST00000558868 RYR3Q15413 4870 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms