RNA–Protein interactions for RNA: ENST00000557657.5

TMEM260-216, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-216ENST00000557657 Q8N1Y9 231 aa15.75■□□□□ 0.11
TMEM260-216ENST00000557657 TRBV7-9A0A0J9YWB2 115 aa15.75■□□□□ 0.11
TMEM260-216ENST00000557657 A6NDN8 102 aa15.75■□□□□ 0.11
TMEM260-216ENST00000557657 NXPH4O95158 308 aa15.74■□□□□ 0.11
TMEM260-216ENST00000557657 LGALS1P09382 135 aaKnown RBP15.74■□□□□ 0.11
TMEM260-216ENST00000557657 RPL39P62891 51 aaKnown RBP15.74■□□□□ 0.11
TMEM260-216ENST00000557657 Q6YL49 198 aa15.74■□□□□ 0.11
TMEM260-216ENST00000557657 NEXN-AS1Q8NBZ9 246 aa15.74■□□□□ 0.11
TMEM260-216ENST00000557657 BAALCQ8WXS3 180 aa15.74■□□□□ 0.11
TMEM260-216ENST00000557657 CHTOPQ9Y3Y2 248 aaKnown RBP15.74■□□□□ 0.11
TMEM260-216ENST00000557657 H3BRM9 83 aa15.74■□□□□ 0.11
TMEM260-216ENST00000557657 ZNF843Q8N446 348 aa15.74■□□□□ 0.11
TMEM260-216ENST00000557657 C9orf118A6NHY6 69 aa15.73■□□□□ 0.11
TMEM260-216ENST00000557657 F8VRH5 84 aa15.73■□□□□ 0.11
TMEM260-216ENST00000557657 HTN1P15515 57 aa15.73■□□□□ 0.11
TMEM260-216ENST00000557657 SNRPD3P62318 126 aaKnown RBP15.73■□□□□ 0.11
TMEM260-216ENST00000557657 IGHV3-16A0A0C4DH30 117 aa15.73■□□□□ 0.11
TMEM260-216ENST00000557657 H7C1H1 209 aa15.73■□□□□ 0.11
TMEM260-216ENST00000557657 PRSS29PA6NIE9 313 aa15.72■□□□□ 0.11
TMEM260-216ENST00000557657 KNCNA6PVL3 124 aa15.72■□□□□ 0.11
TMEM260-216ENST00000557657 J3QLI3 93 aa15.72■□□□□ 0.11
TMEM260-216ENST00000557657 FSHBP01225 129 aa15.71■□□□□ 0.11
TMEM260-216ENST00000557657 Q5PR19 223 aa15.71■□□□□ 0.11
TMEM260-216ENST00000557657 WNK1Q9H4A3 2382 aa15.71■□□□□ 0.11
TMEM260-216ENST00000557657 GAGE10A6NGK3 116 aa15.71■□□□□ 0.1
TMEM260-216ENST00000557657 TSHBP01222 138 aa15.71■□□□□ 0.1
TMEM260-216ENST00000557657 RBMY1A1P0DJD3 496 aaKnown RBP15.7■□□□□ 0.1
TMEM260-216ENST00000557657 RBMY1CP0DJD4 496 aa15.7■□□□□ 0.1
TMEM260-216ENST00000557657 PLNP26678 52 aa15.7■□□□□ 0.1
TMEM260-216ENST00000557657 RBMY1FQ15415 496 aaKnown RBP15.7■□□□□ 0.1
TMEM260-216ENST00000557657 TCTEX1D4Q5JR98 221 aa15.7■□□□□ 0.1
TMEM260-216ENST00000557657 TP53TG1Q9Y2A0 90 aa15.7■□□□□ 0.1
TMEM260-216ENST00000557657 HLA-DRB4P13762 266 aa15.7■□□□□ 0.1
TMEM260-216ENST00000557657 RBX1P62877 108 aa15.7■□□□□ 0.1
TMEM260-216ENST00000557657 ZNF256Q9Y2P7 627 aaPredicted RBP15.7■□□□□ 0.1
TMEM260-216ENST00000557657 HLA-DRB4X5D2U9 266 aa15.7■□□□□ 0.1
TMEM260-216ENST00000557657 TENM4Q6N022 2769 aa15.69■□□□□ 0.1
TMEM260-216ENST00000557657 GAGE12BA1L429 117 aa15.69■□□□□ 0.1
TMEM260-216ENST00000557657 CDKN1BP46527 198 aa15.69■□□□□ 0.1
TMEM260-216ENST00000557657 POM121L12Q8N7R1 296 aa15.69■□□□□ 0.1
TMEM260-216ENST00000557657 TRAV12-1A0A0B4J245 112 aa15.69■□□□□ 0.1
TMEM260-216ENST00000557657 RNF151Q2KHN1 245 aa15.69■□□□□ 0.1
TMEM260-216ENST00000557657 Q96MF0 132 aa15.69■□□□□ 0.1
TMEM260-216ENST00000557657 NHP2Q9NX24 153 aaKnown RBP15.69■□□□□ 0.1
TMEM260-216ENST00000557657 FLNAP21333 2647 aaKnown RBP15.69■□□□□ 0.1
TMEM260-216ENST00000557657 SDHAF1A6NFY7 115 aa15.68■□□□□ 0.1
TMEM260-216ENST00000557657 CRYGDP07320 174 aa15.68■□□□□ 0.1
TMEM260-216ENST00000557657 MORN3Q6PF18 240 aaPredicted RBP15.68■□□□□ 0.1
TMEM260-216ENST00000557657 CST9LQ9H4G1 147 aa15.68■□□□□ 0.1
TMEM260-216ENST00000557657 HIGD1BQ9P298 99 aa15.68■□□□□ 0.1
TMEM260-216ENST00000557657 POLR2KP53803 58 aaKnown RBP15.68■□□□□ 0.1
TMEM260-216ENST00000557657 ZNF56Q15929 161 aa15.68■□□□□ 0.1
TMEM260-216ENST00000557657 ZFP2Q6ZN57 461 aa15.68■□□□□ 0.1
TMEM260-216ENST00000557657 UBE2E2Q96LR5 201 aa15.68■□□□□ 0.1
TMEM260-216ENST00000557657 C9orf85Q96MD7 179 aa15.68■□□□□ 0.1
TMEM260-216ENST00000557657 ELANEP08246 267 aa15.67■□□□□ 0.1
TMEM260-216ENST00000557657 KHDC1LQ5JSQ8 128 aa15.67■□□□□ 0.1
TMEM260-216ENST00000557657 ACANP16112 2415 aa15.66■□□□□ 0.1
TMEM260-216ENST00000557657 IGHV1OR15-1A0A075B7D0 117 aa15.66■□□□□ 0.1
TMEM260-216ENST00000557657 TMEM89A2RUT3 159 aa15.66■□□□□ 0.1
TMEM260-216ENST00000557657 AMTNQ6UX39 209 aa15.66■□□□□ 0.1
TMEM260-216ENST00000557657 UFSP1Q6NVU6 142 aa15.66■□□□□ 0.1
TMEM260-216ENST00000557657 OPRPNQ99935 248 aaPredicted RBP15.66■□□□□ 0.1
TMEM260-216ENST00000557657 IGHV3-73A0A0B4J1V6 119 aa15.65■□□□□ 0.1
TMEM260-216ENST00000557657 DEFB113Q30KQ7 82 aa15.65■□□□□ 0.1
TMEM260-216ENST00000557657 HIST2H2BCQ6DN03 193 aa15.65■□□□□ 0.1
TMEM260-216ENST00000557657 CEND1Q8N111 149 aa15.65■□□□□ 0.1
TMEM260-216ENST00000557657 SMIM13P0DJ93 91 aa15.65■□□□□ 0.1
TMEM260-216ENST00000557657 DEFB131AP59861 70 aa15.65■□□□□ 0.1
TMEM260-216ENST00000557657 CD300EQ496F6 205 aaPredicted RBP15.64■□□□□ 0.09
TMEM260-216ENST00000557657 CYSLTR1Q9Y271 337 aa15.64■□□□□ 0.09
TMEM260-216ENST00000557657 A0A1W2PPM0 123 aa15.64■□□□□ 0.09
TMEM260-216ENST00000557657 LGALS9O00182 355 aa15.64■□□□□ 0.09
TMEM260-216ENST00000557657 ZNF876PQ49A33 203 aa15.64■□□□□ 0.09
TMEM260-216ENST00000557657 SAMD13Q5VXD3 122 aa15.64■□□□□ 0.09
TMEM260-216ENST00000557657 KLHL30-AS1Q8NEE0 82 aa15.64■□□□□ 0.09
TMEM260-216ENST00000557657 OR11H1Q8NG94 326 aa15.64■□□□□ 0.09
TMEM260-216ENST00000557657 NOTCH3Q9UM47 2321 aa15.63■□□□□ 0.09
TMEM260-216ENST00000557657 OR11H12B2RN74 326 aa15.63■□□□□ 0.09
TMEM260-216ENST00000557657 OR11H2Q8NH07 326 aa15.63■□□□□ 0.09
TMEM260-216ENST00000557657 PRADC1Q9BSG0 188 aa15.63■□□□□ 0.09
TMEM260-216ENST00000557657 IGIPA6NJ69 53 aa15.63■□□□□ 0.09
TMEM260-216ENST00000557657 C11orf86A6NJI1 115 aa15.63■□□□□ 0.09
TMEM260-216ENST00000557657 PROK1P58294 105 aa15.63■□□□□ 0.09
TMEM260-216ENST00000557657 C11orf44Q8N8P7 122 aa15.63■□□□□ 0.09
TMEM260-216ENST00000557657 M0QY20 66 aa15.62■□□□□ 0.09
TMEM260-216ENST00000557657 PHLDA1Q8WV24 401 aaPredicted RBP15.62■□□□□ 0.09
TMEM260-216ENST00000557657 HIST1H4GQ99525 98 aa15.62■□□□□ 0.09
TMEM260-216ENST00000557657 RBMY1BA6NDE4 496 aaKnown RBP15.62■□□□□ 0.09
TMEM260-216ENST00000557657 RBMY1EA6NEQ0 496 aaKnown RBP15.62■□□□□ 0.09
TMEM260-216ENST00000557657 K7EP34 96 aa15.62■□□□□ 0.09
TMEM260-216ENST00000557657 PPP1R17O96001 155 aa15.62■□□□□ 0.09
TMEM260-216ENST00000557657 RBMY1DP0C7P1 496 aaKnown RBP15.62■□□□□ 0.09
TMEM260-216ENST00000557657 P0DMU3 169 aa15.62■□□□□ 0.09
TMEM260-216ENST00000557657 FAM231AP0DMU4 169 aa15.62■□□□□ 0.09
TMEM260-216ENST00000557657 FAM231CP0DMU5 169 aa15.62■□□□□ 0.09
TMEM260-216ENST00000557657 ODF3Q96PU9 254 aa15.62■□□□□ 0.09
TMEM260-216ENST00000557657 SPCS1Q9Y6A9 102 aa15.62■□□□□ 0.09
TMEM260-216ENST00000557657 IGLV4-69A0A075B6H9 119 aa15.61■□□□□ 0.09
TMEM260-216ENST00000557657 VCYO14598 125 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms