RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 TRAV26-2A0A0B4J265 109 aa9.08□□□□□ -0.96
SHMT2-233ENST00000557529 GIG44P09565 113 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-233ENST00000557529 LINC00315P59091 139 aa9.08□□□□□ -0.96
SHMT2-233ENST00000557529 Q6ZWC4 215 aa9.08□□□□□ -0.96
SHMT2-233ENST00000557529 NRACQ8N912 160 aa9.08□□□□□ -0.96
SHMT2-233ENST00000557529 C11orf72Q8NBR9 251 aa9.08□□□□□ -0.96
SHMT2-233ENST00000557529 NDUFAF3Q9BU61 184 aa9.08□□□□□ -0.96
SHMT2-233ENST00000557529 TENM1Q9UKZ4 2725 aa9.08□□□□□ -0.96
SHMT2-233ENST00000557529 MUC4Q99102 2169 aa9.07□□□□□ -0.96
SHMT2-233ENST00000557529 IGHV3OR16-12A0A075B7B8 117 aa9.07□□□□□ -0.96
SHMT2-233ENST00000557529 A0A087WWL8 130 aa9.07□□□□□ -0.96
SHMT2-233ENST00000557529 IGHV1-24A0A0C4DH33 117 aa9.07□□□□□ -0.96
SHMT2-233ENST00000557529 LINC01546A6NGU7 62 aa9.07□□□□□ -0.96
SHMT2-233ENST00000557529 GAS8-AS1O95177 125 aa9.07□□□□□ -0.96
SHMT2-233ENST00000557529 GATA1P15976 413 aaPredicted RBP9.07□□□□□ -0.96
SHMT2-233ENST00000557529 C20orf78Q9BR46 151 aa9.07□□□□□ -0.96
SHMT2-233ENST00000557529 CSTL1Q9H114 145 aa9.07□□□□□ -0.96
SHMT2-233ENST00000557529 A8MWV9 139 aa9.06□□□□□ -0.96
SHMT2-233ENST00000557529 F5H697 171 aa9.06□□□□□ -0.96
SHMT2-233ENST00000557529 CRYGDP07320 174 aa9.06□□□□□ -0.96
SHMT2-233ENST00000557529 Q8N8P6 123 aa9.06□□□□□ -0.96
SHMT2-233ENST00000557529 TMEM263Q8WUH6 116 aaKnown RBP9.06□□□□□ -0.96
SHMT2-233ENST00000557529 RASL10AQ92737 203 aa9.06□□□□□ -0.96
SHMT2-233ENST00000557529 JPT2Q9H910 190 aa9.06□□□□□ -0.96
SHMT2-233ENST00000557529 PRM2P04554 102 aa9.05□□□□□ -0.96
SHMT2-233ENST00000557529 FAM74A4Q5TZK3 123 aa9.05□□□□□ -0.96
SHMT2-233ENST00000557529 ZNF705AQ6ZN79 300 aaPredicted RBP9.05□□□□□ -0.96
SHMT2-233ENST00000557529 CSNK1G2-AS1Q8NCQ2 148 aa9.05□□□□□ -0.96
SHMT2-233ENST00000557529 NIT2Q9NQR4 276 aa9.05□□□□□ -0.96
SHMT2-233ENST00000557529 HSPB8Q9UJY1 196 aa9.05□□□□□ -0.96
SHMT2-233ENST00000557529 LEPROTL1O95214 131 aa9.04□□□□□ -0.96
SHMT2-233ENST00000557529 SCGB1D1O95968 90 aa9.04□□□□□ -0.96
SHMT2-233ENST00000557529 AZU1P20160 251 aa9.04□□□□□ -0.96
SHMT2-233ENST00000557529 KRTDAPP60985 99 aa9.04□□□□□ -0.96
SHMT2-233ENST00000557529 SUMO2P61956 95 aaKnown RBP9.04□□□□□ -0.96
SHMT2-233ENST00000557529 ZNF56Q15929 161 aa9.04□□□□□ -0.96
SHMT2-233ENST00000557529 PMCHL1Q16048 86 aa9.04□□□□□ -0.96
SHMT2-233ENST00000557529 SUMO4Q6EEV6 95 aa9.04□□□□□ -0.96
SHMT2-233ENST00000557529 IL17DQ8TAD2 202 aa9.04□□□□□ -0.96
SHMT2-233ENST00000557529 RNASE8Q8TDE3 154 aaKnown RBP9.04□□□□□ -0.96
SHMT2-233ENST00000557529 C16orf74Q96GX8 76 aa9.04□□□□□ -0.96
SHMT2-233ENST00000557529 SMIM2Q9BVW6 85 aa9.04□□□□□ -0.96
SHMT2-233ENST00000557529 IGLV2-18A0A075B6J9 118 aa9.03□□□□□ -0.96
SHMT2-233ENST00000557529 KIR2DL5BA0A0G2JN68 375 aa9.03□□□□□ -0.96
SHMT2-233ENST00000557529 KIR2DL5BA0A0G2JPC4 375 aa9.03□□□□□ -0.96
SHMT2-233ENST00000557529 H7C1H1 209 aa9.03□□□□□ -0.96
SHMT2-233ENST00000557529 K7EMI3 77 aa9.03□□□□□ -0.96
SHMT2-233ENST00000557529 RHODO00212 210 aa9.03□□□□□ -0.96
SHMT2-233ENST00000557529 RPL32P62910 135 aaKnown RBP9.03□□□□□ -0.96
SHMT2-233ENST00000557529 RRN3P1Q2M238 152 aa9.03□□□□□ -0.96
SHMT2-233ENST00000557529 KIR2DL5AQ8N109 375 aa9.03□□□□□ -0.96
SHMT2-233ENST00000557529 KIR2DL5BQ8NHK3 375 aa9.03□□□□□ -0.96
SHMT2-233ENST00000557529 ZMAT5Q9UDW3 170 aaKnown RBP9.03□□□□□ -0.96
SHMT2-233ENST00000557529 NOTCH3Q9UM47 2321 aa9.03□□□□□ -0.96
SHMT2-233ENST00000557529 TRBV6-5A0A0K0K1A5 114 aa9.02□□□□□ -0.97
SHMT2-233ENST00000557529 HBDP02042 147 aa9.02□□□□□ -0.97
SHMT2-233ENST00000557529 C3orf79P0CE67 100 aa9.02□□□□□ -0.97
SHMT2-233ENST00000557529 APOC4P55056 127 aa9.02□□□□□ -0.97
SHMT2-233ENST00000557529 DAZ2Q13117 558 aaKnown RBP9.02□□□□□ -0.97
SHMT2-233ENST00000557529 LGALS9BQ3B8N2 356 aa9.02□□□□□ -0.97
SHMT2-233ENST00000557529 RPL39LQ96EH5 51 aaKnown RBP9.02□□□□□ -0.97
SHMT2-233ENST00000557529 EDA2RQ9HAV5 297 aa9.02□□□□□ -0.97
SHMT2-233ENST00000557529 ST20Q9HBF5 79 aa9.02□□□□□ -0.97
SHMT2-233ENST00000557529 MAST4O15021 2626 aa9.02□□□□□ -0.97
SHMT2-233ENST00000557529 M0QY20 66 aa9.01□□□□□ -0.97
SHMT2-233ENST00000557529 RS1O15537 224 aa9.01□□□□□ -0.97
SHMT2-233ENST00000557529 BTF3P20290 206 aaKnown RBP9.01□□□□□ -0.97
SHMT2-233ENST00000557529 FCER1GP30273 86 aa9.01□□□□□ -0.97
SHMT2-233ENST00000557529 S100A12P80511 92 aa9.01□□□□□ -0.97
SHMT2-233ENST00000557529 CFAP126Q5VTH2 177 aa9.01□□□□□ -0.97
SHMT2-233ENST00000557529 MRPL16Q9NX20 251 aaKnown RBP9.01□□□□□ -0.97
SHMT2-233ENST00000557529 SMIM9A6NGZ8 99 aa9□□□□□ -0.97
SHMT2-233ENST00000557529 LAGE3Q14657 143 aa9□□□□□ -0.97
SHMT2-233ENST00000557529 ORMDL2Q53FV1 153 aa9□□□□□ -0.97
SHMT2-233ENST00000557529 UFSP1Q6NVU6 142 aa9□□□□□ -0.97
SHMT2-233ENST00000557529 ZFP2Q6ZN57 461 aa9□□□□□ -0.97
SHMT2-233ENST00000557529 TMEM70Q9BUB7 260 aa9□□□□□ -0.97
SHMT2-233ENST00000557529 MAP1LC3CQ9BXW4 147 aa9□□□□□ -0.97
SHMT2-233ENST00000557529 VWFP04275 2813 aa9□□□□□ -0.97
SHMT2-233ENST00000557529 A0A096LNJ9 63 aa8.99□□□□□ -0.97
SHMT2-233ENST00000557529 TRGV1A0A0A0MS02 117 aa8.99□□□□□ -0.97
SHMT2-233ENST00000557529 VCYO14598 125 aa8.99□□□□□ -0.97
SHMT2-233ENST00000557529 C20orf202A1L168 122 aa8.99□□□□□ -0.97
SHMT2-233ENST00000557529 POLR2KP53803 58 aaKnown RBP8.99□□□□□ -0.97
SHMT2-233ENST00000557529 EGFEM1PQ0D2K5 195 aa8.99□□□□□ -0.97
SHMT2-233ENST00000557529 CDPF1Q6NVV7 123 aa8.99□□□□□ -0.97
SHMT2-233ENST00000557529 PET117Q6UWS5 81 aa8.99□□□□□ -0.97
SHMT2-233ENST00000557529 OVOL2Q9BRP0 275 aa8.99□□□□□ -0.97
SHMT2-233ENST00000557529 PLAC8L1A1L4L8 177 aa8.98□□□□□ -0.97
SHMT2-233ENST00000557529 SDHAF1A6NFY7 115 aa8.98□□□□□ -0.97
SHMT2-233ENST00000557529 SYS1-DBNDD2H3BUS1 97 aa8.98□□□□□ -0.97
SHMT2-233ENST00000557529 TCAPO15273 167 aa8.98□□□□□ -0.97
SHMT2-233ENST00000557529 G0S2P27469 103 aa8.98□□□□□ -0.97
SHMT2-233ENST00000557529 OXLD1Q5BKU9 147 aa8.98□□□□□ -0.97
SHMT2-233ENST00000557529 LINC00173Q6ZV60 143 aa8.98□□□□□ -0.97
SHMT2-233ENST00000557529 Q8N976 141 aa8.98□□□□□ -0.97
SHMT2-233ENST00000557529 OR4C5Q8NGB2 326 aa8.98□□□□□ -0.97
SHMT2-233ENST00000557529 KIR2DL4Q99706 377 aa8.98□□□□□ -0.97
SHMT2-233ENST00000557529 NOP10Q9NPE3 64 aaKnown RBP8.98□□□□□ -0.97
SHMT2-233ENST00000557529 IGHV3-73A0A0B4J1V6 119 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms