RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 DYNLRB1Q9NP97 96 aa3.92□□□□□ -1.78
LSM3P2-201ENST00000551246 ZNRD1Q9P1U0 126 aa3.92□□□□□ -1.78
LSM3P2-201ENST00000551246 ZNF256Q9Y2P7 627 aaPredicted RBP3.92□□□□□ -1.78
LSM3P2-201ENST00000551246 SERP1Q9Y6X1 66 aa3.92□□□□□ -1.78
LSM3P2-201ENST00000551246 TRAV26-2A0A0B4J265 109 aa3.91□□□□□ -1.78
LSM3P2-201ENST00000551246 TRAV41A0A0B4J266 112 aa3.91□□□□□ -1.78
LSM3P2-201ENST00000551246 TRBV6-5A0A0K0K1A5 114 aa3.91□□□□□ -1.78
LSM3P2-201ENST00000551246 COX6CP09669 75 aa3.91□□□□□ -1.78
LSM3P2-201ENST00000551246 IL11RAQ14626 422 aa3.91□□□□□ -1.78
LSM3P2-201ENST00000551246 GFRALQ6UXV0 394 aa3.91□□□□□ -1.78
LSM3P2-201ENST00000551246 Q6ZT83 130 aa3.91□□□□□ -1.78
LSM3P2-201ENST00000551246 C9orf139Q6ZV77 190 aa3.91□□□□□ -1.78
LSM3P2-201ENST00000551246 DYNAPQ8N1N2 210 aa3.91□□□□□ -1.78
LSM3P2-201ENST00000551246 LINC01561Q8N1V8 128 aa3.91□□□□□ -1.78
LSM3P2-201ENST00000551246 Q8TAT8 98 aa3.91□□□□□ -1.78
LSM3P2-201ENST00000551246 RNF5Q99942 180 aa3.91□□□□□ -1.78
LSM3P2-201ENST00000551246 IGLV3-9A0A075B6K5 115 aa3.9□□□□□ -1.79
LSM3P2-201ENST00000551246 TRGV5A0A0B4J1U4 118 aa3.9□□□□□ -1.79
LSM3P2-201ENST00000551246 IGHV1-18A0A0C4DH31 117 aa3.9□□□□□ -1.79
LSM3P2-201ENST00000551246 PCNX2A6NKB5 2137 aa3.9□□□□□ -1.79
LSM3P2-201ENST00000551246 PRAC2D3DTV9 90 aa3.9□□□□□ -1.79
LSM3P2-201ENST00000551246 TIMM8AO60220 97 aaPredicted RBP3.9□□□□□ -1.79
LSM3P2-201ENST00000551246 LGALS3P17931 250 aaKnown RBP3.9□□□□□ -1.79
LSM3P2-201ENST00000551246 ZNF415Q09FC8 603 aa3.9□□□□□ -1.79
LSM3P2-201ENST00000551246 RHOHQ15669 191 aa3.9□□□□□ -1.79
LSM3P2-201ENST00000551246 MIAQ16674 131 aa3.9□□□□□ -1.79
LSM3P2-201ENST00000551246 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.79
LSM3P2-201ENST00000551246 LYPD5Q6UWN5 251 aa3.9□□□□□ -1.79
LSM3P2-201ENST00000551246 C9orf47Q6ZRZ4 202 aa3.9□□□□□ -1.79
LSM3P2-201ENST00000551246 APRG1Q8IVJ8 170 aa3.9□□□□□ -1.79
LSM3P2-201ENST00000551246 CLEC2BQ92478 149 aa3.9□□□□□ -1.79
LSM3P2-201ENST00000551246 EEF1AKMT3Q96AZ1 226 aa3.9□□□□□ -1.79
LSM3P2-201ENST00000551246 UBE2D4Q9Y2X8 147 aa3.9□□□□□ -1.79
LSM3P2-201ENST00000551246 LENEPQ9Y5L5 61 aa3.9□□□□□ -1.79
LSM3P2-201ENST00000551246 FREM1Q5H8C1 2179 aa3.9□□□□□ -1.79
LSM3P2-201ENST00000551246 CENPFP49454 3210 aa3.9□□□□□ -1.79
LSM3P2-201ENST00000551246 IGHV3-21A0A0B4J1V1 117 aa3.89□□□□□ -1.79
LSM3P2-201ENST00000551246 COX7A2LO14548 114 aa3.89□□□□□ -1.79
LSM3P2-201ENST00000551246 SPRY2O43597 315 aa3.89□□□□□ -1.79
LSM3P2-201ENST00000551246 INAFM2P0DMQ5 153 aa3.89□□□□□ -1.79
LSM3P2-201ENST00000551246 RPL35AP18077 110 aaKnown RBP3.89□□□□□ -1.79
LSM3P2-201ENST00000551246 TIRAPP58753 221 aa3.89□□□□□ -1.79
LSM3P2-201ENST00000551246 MRPS36P82909 103 aaKnown RBP3.89□□□□□ -1.79
LSM3P2-201ENST00000551246 ADAMTSL4-AS1Q5T5F5 129 aa3.89□□□□□ -1.79
LSM3P2-201ENST00000551246 FP248Q71RG6 208 aaPredicted RBP3.89□□□□□ -1.79
LSM3P2-201ENST00000551246 FAM104AQ969W3 186 aa3.89□□□□□ -1.79
LSM3P2-201ENST00000551246 RPL39LQ96EH5 51 aaKnown RBP3.89□□□□□ -1.79
LSM3P2-201ENST00000551246 PIMREGQ9BSJ6 248 aa3.89□□□□□ -1.79
LSM3P2-201ENST00000551246 RNF7Q9UBF6 113 aa3.89□□□□□ -1.79
LSM3P2-201ENST00000551246 SLC25A15Q9Y619 301 aa3.89□□□□□ -1.79
LSM3P2-201ENST00000551246 F5P12259 2224 aa3.89□□□□□ -1.79
LSM3P2-201ENST00000551246 DSCAML1Q8TD84 2053 aa3.88□□□□□ -1.79
LSM3P2-201ENST00000551246 IGLV11-55A0A075B6I3 123 aa3.88□□□□□ -1.79
LSM3P2-201ENST00000551246 SMIM26A0A096LP01 95 aa3.88□□□□□ -1.79
LSM3P2-201ENST00000551246 TRBV27A0A0K0K1C4 114 aa3.88□□□□□ -1.79
LSM3P2-201ENST00000551246 USP17L23D6RBM5 183 aa3.88□□□□□ -1.79
LSM3P2-201ENST00000551246 TMEM178BH3BS89 294 aa3.88□□□□□ -1.79
LSM3P2-201ENST00000551246 VCYO14598 125 aa3.88□□□□□ -1.79
LSM3P2-201ENST00000551246 RNASE4P34096 147 aaKnown RBP3.88□□□□□ -1.79
LSM3P2-201ENST00000551246 NSUN5P1Q3KNT7 163 aa3.88□□□□□ -1.79
LSM3P2-201ENST00000551246 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.88□□□□□ -1.79
LSM3P2-201ENST00000551246 C1orf158Q8N1D5 194 aa3.88□□□□□ -1.79
LSM3P2-201ENST00000551246 MBD3L2Q8NHZ7 208 aaPredicted RBP3.88□□□□□ -1.79
LSM3P2-201ENST00000551246 DEFB118Q96PH6 123 aa3.88□□□□□ -1.79
LSM3P2-201ENST00000551246 CCL13Q99616 98 aa3.88□□□□□ -1.79
LSM3P2-201ENST00000551246 TTTY12Q9BZ98 90 aa3.88□□□□□ -1.79
LSM3P2-201ENST00000551246 TP53TG1Q9Y2A0 90 aa3.88□□□□□ -1.79
LSM3P2-201ENST00000551246 MYO7AQ13402 2215 aa3.88□□□□□ -1.79
LSM3P2-201ENST00000551246 GOLGB1Q14789 3259 aaKnown RBP3.88□□□□□ -1.79
LSM3P2-201ENST00000551246 ASXL3Q9C0F0 2248 aa3.87□□□□□ -1.79
LSM3P2-201ENST00000551246 FAM223BA6NKX1 122 aa3.87□□□□□ -1.79
LSM3P2-201ENST00000551246 H7C2G1 150 aa3.87□□□□□ -1.79
LSM3P2-201ENST00000551246 EDN2P20800 178 aa3.87□□□□□ -1.79
LSM3P2-201ENST00000551246 DLX1P56177 255 aa3.87□□□□□ -1.79
LSM3P2-201ENST00000551246 SYNJ2BPP57105 145 aa3.87□□□□□ -1.79
LSM3P2-201ENST00000551246 DAZ2Q13117 558 aaKnown RBP3.87□□□□□ -1.79
LSM3P2-201ENST00000551246 Q1RN00 199 aa3.87□□□□□ -1.79
LSM3P2-201ENST00000551246 PMS2CLQ68D20 193 aa3.87□□□□□ -1.79
LSM3P2-201ENST00000551246 DAZ4Q86SG3 579 aaKnown RBP3.87□□□□□ -1.79
LSM3P2-201ENST00000551246 SAP25Q8TEE9 199 aa3.87□□□□□ -1.79
LSM3P2-201ENST00000551246 KLK15Q9H2R5 256 aa3.87□□□□□ -1.79
LSM3P2-201ENST00000551246 DAZ1Q9NQZ3 744 aaKnown RBP3.87□□□□□ -1.79
LSM3P2-201ENST00000551246 DAZ3Q9NR90 486 aaKnown RBP3.87□□□□□ -1.79
LSM3P2-201ENST00000551246 BEX4Q9NWD9 120 aaPredicted RBP3.87□□□□□ -1.79
LSM3P2-201ENST00000551246 V9GYY9 64 aa3.87□□□□□ -1.79
LSM3P2-201ENST00000551246 NAV3Q8IVL0 2385 aa3.87□□□□□ -1.79
LSM3P2-201ENST00000551246 SDK2Q58EX2 2172 aa3.86□□□□□ -1.79
LSM3P2-201ENST00000551246 IGHV1-3A0A0C4DH29 117 aa3.86□□□□□ -1.79
LSM3P2-201ENST00000551246 IGHV1-58A0A0C4DH39 117 aa3.86□□□□□ -1.79
LSM3P2-201ENST00000551246 TRBV10-3A0A0K0K1G6 114 aa3.86□□□□□ -1.79
LSM3P2-201ENST00000551246 FAM236DA0A1B0GTK5 79 aa3.86□□□□□ -1.79
LSM3P2-201ENST00000551246 H7BZZ5 65 aa3.86□□□□□ -1.79
LSM3P2-201ENST00000551246 IGLV1-47P01700 117 aa3.86□□□□□ -1.79
LSM3P2-201ENST00000551246 PRSS2P07478 247 aa3.86□□□□□ -1.79
LSM3P2-201ENST00000551246 BAALC-AS2P0C853 105 aa3.86□□□□□ -1.79
LSM3P2-201ENST00000551246 IGHV3-30-3P0DP02 117 aa3.86□□□□□ -1.79
LSM3P2-201ENST00000551246 FAM236CP0DP71 79 aa3.86□□□□□ -1.79
LSM3P2-201ENST00000551246 PRB4P10163 310 aaPredicted RBP3.86□□□□□ -1.79
LSM3P2-201ENST00000551246 NPC2P61916 151 aa3.86□□□□□ -1.79
LSM3P2-201ENST00000551246 FAM27E3Q08E93 113 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms