RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 PPBPP02775 128 aa8.91□□□□□ -0.98
AP003559.1-201ENST00000540906 FA2HQ7L5A8 372 aa8.91□□□□□ -0.98
AP003559.1-201ENST00000540906 TMEM158Q8WZ71 300 aa8.91□□□□□ -0.98
AP003559.1-201ENST00000540906 FAM110AQ9BQ89 295 aa8.91□□□□□ -0.98
AP003559.1-201ENST00000540906 SCGB1D1O95968 90 aa8.9□□□□□ -0.98
AP003559.1-201ENST00000540906 CRYGDP07320 174 aa8.9□□□□□ -0.98
AP003559.1-201ENST00000540906 IGLL1P15814 213 aa8.9□□□□□ -0.98
AP003559.1-201ENST00000540906 MAP1LC3AQ9H492 121 aa8.9□□□□□ -0.98
AP003559.1-201ENST00000540906 AP5S1Q9NUS5 200 aa8.9□□□□□ -0.98
AP003559.1-201ENST00000540906 NACAE9PAV3 2078 aa8.89□□□□□ -0.99
AP003559.1-201ENST00000540906 C9orf66Q5T8R8 295 aa8.89□□□□□ -0.99
AP003559.1-201ENST00000540906 MRAP2Q96G30 205 aa8.89□□□□□ -0.99
AP003559.1-201ENST00000540906 LINC00467Q9BRT7 94 aa8.89□□□□□ -0.99
AP003559.1-201ENST00000540906 CMC4P56277 68 aaPredicted RBP8.89□□□□□ -0.99
AP003559.1-201ENST00000540906 ZNF876PQ49A33 203 aa8.89□□□□□ -0.99
AP003559.1-201ENST00000540906 FAM74A4Q5TZK3 123 aa8.89□□□□□ -0.99
AP003559.1-201ENST00000540906 SUMO4Q6EEV6 95 aa8.89□□□□□ -0.99
AP003559.1-201ENST00000540906 LINC01546A6NGU7 62 aa8.88□□□□□ -0.99
AP003559.1-201ENST00000540906 MORN3Q6PF18 240 aaPredicted RBP8.88□□□□□ -0.99
AP003559.1-201ENST00000540906 CSNK1G2-AS1Q8NCQ2 148 aa8.88□□□□□ -0.99
AP003559.1-201ENST00000540906 C20orf144Q9BQM9 153 aa8.88□□□□□ -0.99
AP003559.1-201ENST00000540906 MCRIP2Q9BUT9 160 aaKnown RBP8.88□□□□□ -0.99
AP003559.1-201ENST00000540906 MRPL16Q9NX20 251 aaKnown RBP8.88□□□□□ -0.99
AP003559.1-201ENST00000540906 LAMTOR2Q9Y2Q5 125 aa8.88□□□□□ -0.99
AP003559.1-201ENST00000540906 NEGR1Q7Z3B1 354 aa8.87□□□□□ -0.99
AP003559.1-201ENST00000540906 Q8N8P6 123 aa8.87□□□□□ -0.99
AP003559.1-201ENST00000540906 SYT8Q8NBV8 401 aa8.87□□□□□ -0.99
AP003559.1-201ENST00000540906 WFDC9Q8NEX5 89 aa8.87□□□□□ -0.99
AP003559.1-201ENST00000540906 IGHV3-73A0A0B4J1V6 119 aa8.87□□□□□ -0.99
AP003559.1-201ENST00000540906 PRSS47A8MTI9 375 aa8.87□□□□□ -0.99
AP003559.1-201ENST00000540906 TCAPO15273 167 aa8.87□□□□□ -0.99
AP003559.1-201ENST00000540906 LEPROTL1O95214 131 aa8.87□□□□□ -0.99
AP003559.1-201ENST00000540906 RIPPLY3P57055 190 aa8.87□□□□□ -0.99
AP003559.1-201ENST00000540906 ZNF415Q09FC8 603 aa8.87□□□□□ -0.99
AP003559.1-201ENST00000540906 C12orf54Q6X4T0 127 aa8.87□□□□□ -0.99
AP003559.1-201ENST00000540906 IL17DQ8TAD2 202 aa8.87□□□□□ -0.99
AP003559.1-201ENST00000540906 DEFB104AQ8WTQ1 72 aa8.87□□□□□ -0.99
AP003559.1-201ENST00000540906 TMEM208Q9BTX3 173 aa8.87□□□□□ -0.99
AP003559.1-201ENST00000540906 PRO1933Q9H354 126 aa8.87□□□□□ -0.99
AP003559.1-201ENST00000540906 DNHD1Q96M86 4753 aa8.86□□□□□ -0.99
AP003559.1-201ENST00000540906 INSL3P51460 131 aa8.86□□□□□ -0.99
AP003559.1-201ENST00000540906 C3orf56Q8N813 242 aa8.86□□□□□ -0.99
AP003559.1-201ENST00000540906 ZNF747Q9BV97 191 aa8.86□□□□□ -0.99
AP003559.1-201ENST00000540906 M0R2P5 195 aa8.85□□□□□ -0.99
AP003559.1-201ENST00000540906 SMIM17P0DL12 118 aa8.85□□□□□ -0.99
AP003559.1-201ENST00000540906 UFSP1Q6NVU6 142 aa8.85□□□□□ -0.99
AP003559.1-201ENST00000540906 Q6ZSN1 163 aa8.85□□□□□ -0.99
AP003559.1-201ENST00000540906 ZNF664Q8N3J9 261 aa8.85□□□□□ -0.99
AP003559.1-201ENST00000540906 RNASE8Q8TDE3 154 aaKnown RBP8.85□□□□□ -0.99
AP003559.1-201ENST00000540906 SMIM2Q9BVW6 85 aa8.85□□□□□ -0.99
AP003559.1-201ENST00000540906 Q9UF83 564 aa8.85□□□□□ -0.99
AP003559.1-201ENST00000540906 STAB1Q9NY15 2570 aa8.85□□□□□ -0.99
AP003559.1-201ENST00000540906 PLAC8L1A1L4L8 177 aa8.84□□□□□ -0.99
AP003559.1-201ENST00000540906 F5H697 171 aa8.84□□□□□ -0.99
AP003559.1-201ENST00000540906 SUMO2P61956 95 aaKnown RBP8.84□□□□□ -0.99
AP003559.1-201ENST00000540906 NUTF2P61970 127 aaKnown RBP8.84□□□□□ -0.99
AP003559.1-201ENST00000540906 ZNF56Q15929 161 aa8.84□□□□□ -0.99
AP003559.1-201ENST00000540906 TEX43Q6ZNM6 134 aa8.84□□□□□ -0.99
AP003559.1-201ENST00000540906 ATOH7Q8N100 152 aa8.84□□□□□ -0.99
AP003559.1-201ENST00000540906 NXT2Q9NPJ8 142 aaKnown RBP8.84□□□□□ -0.99
AP003559.1-201ENST00000540906 M0QY20 66 aa8.84□□□□□ -0.99
AP003559.1-201ENST00000540906 P0DMU3 169 aa8.84□□□□□ -0.99
AP003559.1-201ENST00000540906 FAM231AP0DMU4 169 aa8.84□□□□□ -0.99
AP003559.1-201ENST00000540906 FAM231CP0DMU5 169 aa8.84□□□□□ -0.99
AP003559.1-201ENST00000540906 BTF3P20290 206 aaKnown RBP8.84□□□□□ -0.99
AP003559.1-201ENST00000540906 MAJINQ3KP22 176 aa8.84□□□□□ -0.99
AP003559.1-201ENST00000540906 H0Y8G0 127 aa8.83□□□□□ -1
AP003559.1-201ENST00000540906 SYS1-DBNDD2H3BUS1 97 aa8.83□□□□□ -1
AP003559.1-201ENST00000540906 HBDP02042 147 aa8.83□□□□□ -1
AP003559.1-201ENST00000540906 CFAP126Q5VTH2 177 aa8.83□□□□□ -1
AP003559.1-201ENST00000540906 GTSCR1Q86UQ5 136 aa8.83□□□□□ -1
AP003559.1-201ENST00000540906 PMCHL2Q9BQD1 86 aa8.83□□□□□ -1
AP003559.1-201ENST00000540906 FCER1GP30273 86 aa8.82□□□□□ -1
AP003559.1-201ENST00000540906 ZNF705AQ6ZN79 300 aaPredicted RBP8.82□□□□□ -1
AP003559.1-201ENST00000540906 TMEM70Q9BUB7 260 aa8.82□□□□□ -1
AP003559.1-201ENST00000540906 CSTL1Q9H114 145 aa8.82□□□□□ -1
AP003559.1-201ENST00000540906 OXLD1Q5BKU9 147 aa8.82□□□□□ -1
AP003559.1-201ENST00000540906 Q6ZTI0 123 aa8.82□□□□□ -1
AP003559.1-201ENST00000540906 PTH2Q96A98 100 aa8.82□□□□□ -1
AP003559.1-201ENST00000540906 C18orf15Q96N68 181 aa8.82□□□□□ -1
AP003559.1-201ENST00000540906 C20orf78Q9BR46 151 aa8.82□□□□□ -1
AP003559.1-201ENST00000540906 GOLT1BQ9Y3E0 138 aa8.82□□□□□ -1
AP003559.1-201ENST00000540906 DNAH3Q8TD57 4116 aa8.81□□□□□ -1
AP003559.1-201ENST00000540906 RS1O15537 224 aa8.81□□□□□ -1
AP003559.1-201ENST00000540906 WIPF1O43516 503 aa8.81□□□□□ -1
AP003559.1-201ENST00000540906 POLR2KP53803 58 aaKnown RBP8.81□□□□□ -1
AP003559.1-201ENST00000540906 TMEM263Q8WUH6 116 aaKnown RBP8.81□□□□□ -1
AP003559.1-201ENST00000540906 SPXQ9BT56 116 aa8.81□□□□□ -1
AP003559.1-201ENST00000540906 ANK2Q01484 3957 aa8.8□□□□□ -1
AP003559.1-201ENST00000540906 TRGV1A0A0A0MS02 117 aa8.8□□□□□ -1
AP003559.1-201ENST00000540906 LINC00587B1AMM8 73 aa8.8□□□□□ -1
AP003559.1-201ENST00000540906 KRTAP10-11P60412 298 aa8.8□□□□□ -1
AP003559.1-201ENST00000540906 LAGE3Q14657 143 aa8.8□□□□□ -1
AP003559.1-201ENST00000540906 ST20Q9HBF5 79 aa8.8□□□□□ -1
AP003559.1-201ENST00000540906 NOP10Q9NPE3 64 aaKnown RBP8.8□□□□□ -1
AP003559.1-201ENST00000540906 HSPB8Q9UJY1 196 aa8.8□□□□□ -1
AP003559.1-201ENST00000540906 PAM16Q9Y3D7 125 aa8.8□□□□□ -1
AP003559.1-201ENST00000540906 TRBV6-5A0A0K0K1A5 114 aa8.79□□□□□ -1
AP003559.1-201ENST00000540906 SDHAF1A6NFY7 115 aa8.79□□□□□ -1
AP003559.1-201ENST00000540906 A8MWV9 139 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms