RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 IGKV1D-13A0A0B4J2D9 117 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 IGHV3-64DA0A0J9YX35 117 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 LOC389332A0A1B0GUA5 103 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 A0A1B0GXF2 115 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 GRIFINA4D1Z8 144 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 PGPA6NDG6 321 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 A8MWV9 139 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 C12orf77C9JDV5 145 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 TMEM262E9PQX1 116 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 UPK2O00526 184 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 UBE2L6O14933 153 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 PGLYRP1O75594 196 aaPredicted RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 CST7O76096 145 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 NDUFA3O95167 84 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 SFT2D2O95562 160 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 LY6G6DO95868 133 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 NCR2O95944 276 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 MT-ATP8P03928 68 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 TRGC2P03986 189 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 CD3DP04234 171 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 TCRAP04437 139 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 FCGR3AP08637 254 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 SEC11BP0C7V7 166 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 INAFM2P0DMQ5 153 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 IGHV1-8P0DP01 117 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 IGKV1-13P0DP09 117 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 PTHLHP12272 177 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 CCL3L1P16619 93 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 ELK1P19419 428 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 VDAC1P21796 283 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 VDAC2P45880 294 aaPredicted RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 MFAP2P55001 183 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 FOXA3P55318 350 aaPredicted RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 MP68P56378 58 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 TAS2R45P59539 299 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 ZNF90Q03938 601 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 SSBP1Q04837 148 aaKnown RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 ZNF816Q0VGE8 651 aaPredicted RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 RBMY1FQ15415 496 aaKnown RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 TDRG1Q3Y452 100 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 LGALSLQ3ZCW2 172 aaPredicted RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 SPATA45Q537H7 98 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 VAX1Q5SQQ9 334 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 AADACL3Q5VUY0 350 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 Q6AWC8 147 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 Q6Q795 121 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 TMEM14EPQ6UXP3 125 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 TEX43Q6ZNM6 134 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 C6orf201Q7Z4U5 140 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 FAM19A3Q7Z5A8 133 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 VMO1Q7Z5L0 202 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 Q8N2B8 174 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 C3orf56Q8N813 242 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 TMEM75Q8N9X5 138 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 NUP35Q8NFH5 326 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 OR11H7Q8NGC8 314 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 OR4X2Q8NGF9 303 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 OR8B3Q8NGG8 313 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 OR4A5Q8NH83 315 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 SCGB1C1Q8TD33 95 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 MYOZ3Q8TDC0 251 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 SMIM4Q8WVI0 70 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 COPS9Q8WXC6 57 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 FRZBQ92765 325 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 RBMXL1Q96E39 390 aaKnown RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 S100A16Q96FQ6 103 aaKnown RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 ARHGAP5-AS1Q96IT6 56 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 OR8B2Q96RD0 313 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 HDHD3Q9BSH5 251 aaPredicted RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 MRPL32Q9BYC8 188 aaKnown RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 IMUPQ9GZP8 106 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 PARP12Q9H0J9 701 aaKnown RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 CST11Q9H112 138 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 TMEM133Q9H2Q1 129 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 NAA60Q9H7X0 242 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 ZNF286AQ9HBT8 521 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 OTORQ9NRC9 128 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 ANAPC11Q9NYG5 84 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 CALYQ9NYX4 217 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 ZNF257Q9Y2Q1 563 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 F11RQ9Y624 299 aaKnown RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 TENM3Q9P273 2699 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 VPS13DQ5THJ4 4388 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 SORL1Q92673 2214 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 TRBV20OR9-2A0A075B6H5 130 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 IGHV4-4A0A075B6R2 117 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 IGLV9-49A0A0B4J1Y8 123 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 TRAV41A0A0B4J266 112 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 TRAV40A0A0B4J280 105 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 MUC21A0A0G2JKD1 596 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 LOC100131303A0A0U1RQF7 123 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 C3orf85A0A1B0GTC6 90 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 KANTRA0A1W2PQU2 76 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 IGLC7A0M8Q6 106 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 TMEM30CPA0ZSE6 113 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 C7orf77A4D0Y5 90 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 A6NDX4 124 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 FAM24AA6NFZ4 105 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 OOSP1A8MZH6 123 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 ZNF736B4DX44 427 aaPredicted RBP1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms