RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 IGKV1D-13A0A0B4J2D9 117 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 IGHV3-64DA0A0J9YX35 117 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 LOC389332A0A1B0GUA5 103 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 A0A1B0GXF2 115 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 GRIFINA4D1Z8 144 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 PGPA6NDG6 321 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 A8MWV9 139 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 C12orf77C9JDV5 145 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 TMEM262E9PQX1 116 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 UPK2O00526 184 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 UBE2L6O14933 153 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 PGLYRP1O75594 196 aaPredicted RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 CST7O76096 145 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 NDUFA3O95167 84 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 SFT2D2O95562 160 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 LY6G6DO95868 133 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 NCR2O95944 276 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 MT-ATP8P03928 68 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 TRGC2P03986 189 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 CD3DP04234 171 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 TCRAP04437 139 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 FCGR3AP08637 254 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 SEC11BP0C7V7 166 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 INAFM2P0DMQ5 153 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 IGHV1-8P0DP01 117 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 IGKV1-13P0DP09 117 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 PTHLHP12272 177 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 CCL3L1P16619 93 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 ELK1P19419 428 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 VDAC1P21796 283 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 VDAC2P45880 294 aaPredicted RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 MFAP2P55001 183 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 FOXA3P55318 350 aaPredicted RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 MP68P56378 58 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 TAS2R45P59539 299 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 ZNF90Q03938 601 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 SSBP1Q04837 148 aaKnown RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 ZNF816Q0VGE8 651 aaPredicted RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 RBMY1FQ15415 496 aaKnown RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 TDRG1Q3Y452 100 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 LGALSLQ3ZCW2 172 aaPredicted RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 SPATA45Q537H7 98 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 VAX1Q5SQQ9 334 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 AADACL3Q5VUY0 350 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 Q6AWC8 147 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 Q6Q795 121 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 TMEM14EPQ6UXP3 125 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 TEX43Q6ZNM6 134 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 C6orf201Q7Z4U5 140 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 FAM19A3Q7Z5A8 133 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 VMO1Q7Z5L0 202 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 Q8N2B8 174 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 C3orf56Q8N813 242 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 TMEM75Q8N9X5 138 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 NUP35Q8NFH5 326 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 OR11H7Q8NGC8 314 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 OR4X2Q8NGF9 303 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 OR8B3Q8NGG8 313 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 OR4A5Q8NH83 315 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 SCGB1C1Q8TD33 95 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 MYOZ3Q8TDC0 251 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 SMIM4Q8WVI0 70 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 COPS9Q8WXC6 57 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 FRZBQ92765 325 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 RBMXL1Q96E39 390 aaKnown RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 S100A16Q96FQ6 103 aaKnown RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 ARHGAP5-AS1Q96IT6 56 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 OR8B2Q96RD0 313 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 HDHD3Q9BSH5 251 aaPredicted RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 MRPL32Q9BYC8 188 aaKnown RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 IMUPQ9GZP8 106 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 PARP12Q9H0J9 701 aaKnown RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 CST11Q9H112 138 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 TMEM133Q9H2Q1 129 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 NAA60Q9H7X0 242 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 ZNF286AQ9HBT8 521 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 OTORQ9NRC9 128 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 ANAPC11Q9NYG5 84 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 CALYQ9NYX4 217 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 ZNF257Q9Y2Q1 563 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 F11RQ9Y624 299 aaKnown RBP1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 TENM3Q9P273 2699 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 VPS13DQ5THJ4 4388 aa1.33□□□□□ -2.2
CBX3P4-201ENST00000538909 SORL1Q92673 2214 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 TRBV20OR9-2A0A075B6H5 130 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 IGHV4-4A0A075B6R2 117 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 IGLV9-49A0A0B4J1Y8 123 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 TRAV41A0A0B4J266 112 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 TRAV40A0A0B4J280 105 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 MUC21A0A0G2JKD1 596 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 LOC100131303A0A0U1RQF7 123 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 C3orf85A0A1B0GTC6 90 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 KANTRA0A1W2PQU2 76 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 IGLC7A0M8Q6 106 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 TMEM30CPA0ZSE6 113 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 C7orf77A4D0Y5 90 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 A6NDX4 124 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 FAM24AA6NFZ4 105 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 OOSP1A8MZH6 123 aa1.32□□□□□ -2.2
CBX3P4-201ENST00000538909 ZNF736B4DX44 427 aaPredicted RBP1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms