RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 PPP1R1CQ8WVI7 109 aa1.7□□□□□ -2.14
CAPRIN1-208ENST00000530008 TMEM14BQ9NUH8 114 aa1.7□□□□□ -2.14
CAPRIN1-208ENST00000530008 COA4Q9NYJ1 87 aa1.7□□□□□ -2.14
CAPRIN1-208ENST00000530008 BET1LQ9NYM9 111 aa1.7□□□□□ -2.14
CAPRIN1-208ENST00000530008 MBD5Q9P267 1494 aa1.69□□□□□ -2.14
CAPRIN1-208ENST00000530008 DAPK1P53355 1430 aa1.69□□□□□ -2.14
CAPRIN1-208ENST00000530008 LOC100130705A0A1B0GUX0 176 aa1.69□□□□□ -2.14
CAPRIN1-208ENST00000530008 LY6G6CO95867 125 aa1.69□□□□□ -2.14
CAPRIN1-208ENST00000530008 RERGLQ9H628 205 aa1.69□□□□□ -2.14
CAPRIN1-208ENST00000530008 MYH6P13533 1939 aa1.68□□□□□ -2.14
CAPRIN1-208ENST00000530008 ELOF1P60002 83 aaKnown RBP1.68□□□□□ -2.14
CAPRIN1-208ENST00000530008 SPINK13Q1W4C9 94 aa1.68□□□□□ -2.14
CAPRIN1-208ENST00000530008 S100A7L2Q5SY68 101 aa1.68□□□□□ -2.14
CAPRIN1-208ENST00000530008 C10orf82Q8WW14 230 aa1.68□□□□□ -2.14
CAPRIN1-208ENST00000530008 PHLPP1O60346 1717 aa1.68□□□□□ -2.14
CAPRIN1-208ENST00000530008 FGF7P21781 194 aa1.67□□□□□ -2.14
CAPRIN1-208ENST00000530008 CBLN1P23435 193 aa1.67□□□□□ -2.14
CAPRIN1-208ENST00000530008 KIF13AQ9H1H9 1805 aa1.67□□□□□ -2.14
CAPRIN1-208ENST00000530008 NAIPQ13075 1403 aa1.66□□□□□ -2.14
CAPRIN1-208ENST00000530008 IFNA17P01571 189 aa1.66□□□□□ -2.14
CAPRIN1-208ENST00000530008 CCL3L1P16619 93 aa1.66□□□□□ -2.14
CAPRIN1-208ENST00000530008 BTG2P78543 158 aa1.66□□□□□ -2.14
CAPRIN1-208ENST00000530008 SPINK9Q5DT21 86 aa1.66□□□□□ -2.14
CAPRIN1-208ENST00000530008 C20orf197Q8N268 126 aa1.66□□□□□ -2.14
CAPRIN1-208ENST00000530008 SERP1Q9Y6X1 66 aa1.66□□□□□ -2.14
CAPRIN1-208ENST00000530008 CFTRP13569 1480 aa1.66□□□□□ -2.14
CAPRIN1-208ENST00000530008 ZNF518AQ6AHZ1 1483 aa1.66□□□□□ -2.14
CAPRIN1-208ENST00000530008 LSM10Q969L4 123 aaKnown RBP1.65□□□□□ -2.15
CAPRIN1-208ENST00000530008 NAA60Q9H7X0 242 aa1.65□□□□□ -2.15
CAPRIN1-208ENST00000530008 NCOA3Q9Y6Q9 1424 aa1.65□□□□□ -2.15
CAPRIN1-208ENST00000530008 ZNF142P52746 1687 aaPredicted RBP1.64□□□□□ -2.15
CAPRIN1-208ENST00000530008 ATG2AQ2TAZ0 1938 aa1.64□□□□□ -2.15
CAPRIN1-208ENST00000530008 LINC00587B1AMM8 73 aa1.64□□□□□ -2.15
CAPRIN1-208ENST00000530008 FXYD6P3P58550 94 aa1.64□□□□□ -2.15
CAPRIN1-208ENST00000530008 SPTSSBQ8NFR3 76 aa1.64□□□□□ -2.15
CAPRIN1-208ENST00000530008 C2orf88Q9BSF0 95 aa1.64□□□□□ -2.15
CAPRIN1-208ENST00000530008 AKAP11Q9UKA4 1901 aa1.64□□□□□ -2.15
CAPRIN1-208ENST00000530008 BCL9LQ86UU0 1499 aa1.63□□□□□ -2.15
CAPRIN1-208ENST00000530008 RBAKDNA6NC62 111 aa1.63□□□□□ -2.15
CAPRIN1-208ENST00000530008 RPL37P61927 97 aaKnown RBP1.63□□□□□ -2.15
CAPRIN1-208ENST00000530008 SSBP1Q04837 148 aaKnown RBP1.63□□□□□ -2.15
CAPRIN1-208ENST00000530008 Q6AWC8 147 aa1.63□□□□□ -2.15
CAPRIN1-208ENST00000530008 DSCR8Q96T75 97 aa1.63□□□□□ -2.15
CAPRIN1-208ENST00000530008 SPAARA0A1B0GVQ0 90 aa1.62□□□□□ -2.15
CAPRIN1-208ENST00000530008 MCRIP1C9JLW8 97 aa1.62□□□□□ -2.15
CAPRIN1-208ENST00000530008 AKAIN1P0CW23 69 aa1.62□□□□□ -2.15
CAPRIN1-208ENST00000530008 PRB3Q04118 309 aaPredicted RBP1.62□□□□□ -2.15
CAPRIN1-208ENST00000530008 COX7B2Q8TF08 81 aa1.62□□□□□ -2.15
CAPRIN1-208ENST00000530008 KMT2BQ9UMN6 2715 aaPredicted RBP1.62□□□□□ -2.15
CAPRIN1-208ENST00000530008 A0A096LNT2 108 aa1.61□□□□□ -2.15
CAPRIN1-208ENST00000530008 UBE2D1P51668 147 aa1.61□□□□□ -2.15
CAPRIN1-208ENST00000530008 ZNF137PP52743 207 aa1.61□□□□□ -2.15
CAPRIN1-208ENST00000530008 C4orf33Q8N1A6 199 aa1.61□□□□□ -2.15
CAPRIN1-208ENST00000530008 CRCT1Q9UGL9 99 aa1.61□□□□□ -2.15
CAPRIN1-208ENST00000530008 AFDNP55196 1824 aaKnown RBP1.61□□□□□ -2.15
CAPRIN1-208ENST00000530008 SPAG17Q6Q759 2223 aa1.6□□□□□ -2.15
CAPRIN1-208ENST00000530008 MUC22E2RYF6 1773 aaPredicted RBP1.6□□□□□ -2.15
CAPRIN1-208ENST00000530008 A0A087WTM6 91 aa1.6□□□□□ -2.15
CAPRIN1-208ENST00000530008 TRBV10-3A0A0K0K1G6 114 aa1.6□□□□□ -2.15
CAPRIN1-208ENST00000530008 Q56UQ5 140 aa1.6□□□□□ -2.15
CAPRIN1-208ENST00000530008 C6orf52Q5T4I8 152 aa1.6□□□□□ -2.15
CAPRIN1-208ENST00000530008 PP6455Q8WZ26 134 aa1.6□□□□□ -2.15
CAPRIN1-208ENST00000530008 FOCADQ5VW36 1801 aa1.59□□□□□ -2.15
CAPRIN1-208ENST00000530008 IFT140Q96RY7 1462 aa1.59□□□□□ -2.15
CAPRIN1-208ENST00000530008 FAM74A4Q5TZK3 123 aa1.59□□□□□ -2.15
CAPRIN1-208ENST00000530008 C12orf73Q69YU5 71 aa1.59□□□□□ -2.15
CAPRIN1-208ENST00000530008 SCN3BQ9NY72 215 aa1.59□□□□□ -2.15
CAPRIN1-208ENST00000530008 LAMB1P07942 1786 aa1.59□□□□□ -2.16
CAPRIN1-208ENST00000530008 ZNF818PQ6ZRF7 136 aa1.58□□□□□ -2.16
CAPRIN1-208ENST00000530008 Q8N8P6 123 aa1.58□□□□□ -2.16
CAPRIN1-208ENST00000530008 SPTBP11277 2137 aa1.58□□□□□ -2.16
CAPRIN1-208ENST00000530008 A0A0D9SG42 100 aa1.57□□□□□ -2.16
CAPRIN1-208ENST00000530008 CCL8P80075 99 aa1.57□□□□□ -2.16
CAPRIN1-208ENST00000530008 RBM3P98179 157 aaKnown RBP1.57□□□□□ -2.16
CAPRIN1-208ENST00000530008 SMG6Q86US8 1419 aaKnown RBP1.57□□□□□ -2.16
CAPRIN1-208ENST00000530008 WDR7Q9Y4E6 1490 aa1.56□□□□□ -2.16
CAPRIN1-208ENST00000530008 CLPSL1A2RUU4 121 aa1.56□□□□□ -2.16
CAPRIN1-208ENST00000530008 MIF4GDA9UHW6 222 aaKnown RBP1.56□□□□□ -2.16
CAPRIN1-208ENST00000530008 TMEM203Q969S6 136 aa1.56□□□□□ -2.16
CAPRIN1-208ENST00000530008 V9GYV3 84 aa1.56□□□□□ -2.16
CAPRIN1-208ENST00000530008 PIGBOS1A0A0B4J2F0 54 aa1.55□□□□□ -2.16
CAPRIN1-208ENST00000530008 PEG3Q9GZU2 1588 aa1.55□□□□□ -2.16
CAPRIN1-208ENST00000530008 TRBV7-1A0A0A6YYK4 115 aa1.54□□□□□ -2.16
CAPRIN1-208ENST00000530008 INSL4Q14641 139 aa1.54□□□□□ -2.16
CAPRIN1-208ENST00000530008 BCORL1Q5H9F3 1711 aa1.54□□□□□ -2.16
CAPRIN1-208ENST00000530008 SPEF2Q9C093 1822 aa1.54□□□□□ -2.16
CAPRIN1-208ENST00000530008 APOC4-APOC2K7ER74 178 aa1.53□□□□□ -2.16
CAPRIN1-208ENST00000530008 IFNGP01579 166 aa1.53□□□□□ -2.16
CAPRIN1-208ENST00000530008 APOC2P02655 101 aa1.53□□□□□ -2.16
CAPRIN1-208ENST00000530008 EDDM3BP56851 147 aa1.53□□□□□ -2.16
CAPRIN1-208ENST00000530008 CATR1Q13166 79 aa1.53□□□□□ -2.16
CAPRIN1-208ENST00000530008 NALCNQ8IZF0 1738 aa1.53□□□□□ -2.16
CAPRIN1-208ENST00000530008 GNG8Q9UK08 70 aa1.53□□□□□ -2.16
CAPRIN1-208ENST00000530008 A2ML1A8K2U0 1454 aa1.52□□□□□ -2.17
CAPRIN1-208ENST00000530008 HCG22E2RYF7 251 aa1.52□□□□□ -2.17
CAPRIN1-208ENST00000530008 F6UZH7 168 aa1.52□□□□□ -2.17
CAPRIN1-208ENST00000530008 SNAPC5O75971 98 aa1.52□□□□□ -2.17
CAPRIN1-208ENST00000530008 LINC00312Q9Y6C7 94 aa1.52□□□□□ -2.17
CAPRIN1-208ENST00000530008 ABCA4P78363 2273 aa1.52□□□□□ -2.17
CAPRIN1-208ENST00000530008 CASKIN1Q8WXD9 1431 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms