RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 FOCADQ5VW36 1801 aa1.08□□□□□ -2.24
SSR3-208ENST00000496050 C20orf202A1L168 122 aa1.07□□□□□ -2.24
SSR3-208ENST00000496050 HIST1H1DP16402 221 aaKnown RBP1.07□□□□□ -2.24
SSR3-208ENST00000496050 GNG4P50150 75 aa1.07□□□□□ -2.24
SSR3-208ENST00000496050 OR2T2Q6IF00 324 aa1.07□□□□□ -2.24
SSR3-208ENST00000496050 PPDPFLQ8WWR9 84 aa1.07□□□□□ -2.24
SSR3-208ENST00000496050 DMAC1Q96GE9 116 aa1.07□□□□□ -2.24
SSR3-208ENST00000496050 SEC11CQ9BY50 192 aa1.07□□□□□ -2.24
SSR3-208ENST00000496050 MRPL36Q9P0J6 103 aaKnown RBP1.07□□□□□ -2.24
SSR3-208ENST00000496050 SERP1Q9Y6X1 66 aa1.07□□□□□ -2.24
SSR3-208ENST00000496050 MYH6P13533 1939 aa1.07□□□□□ -2.24
SSR3-208ENST00000496050 PHLPP1O60346 1717 aa1.06□□□□□ -2.24
SSR3-208ENST00000496050 TEP1Q99973 2627 aaKnown RBP1.06□□□□□ -2.24
SSR3-208ENST00000496050 A2ML1A8K2U0 1454 aa1.06□□□□□ -2.24
SSR3-208ENST00000496050 KIDINS220Q9ULH0 1771 aa1.06□□□□□ -2.24
SSR3-208ENST00000496050 EIF4G3O43432 1585 aaKnown RBP1.06□□□□□ -2.24
SSR3-208ENST00000496050 ZNF462Q96JM2 2506 aa1.06□□□□□ -2.24
SSR3-208ENST00000496050 CXorf51AA0A1B0GTR3 108 aa1.06□□□□□ -2.24
SSR3-208ENST00000496050 SMIM6P0DI80 62 aa1.06□□□□□ -2.24
SSR3-208ENST00000496050 RBP2P50120 134 aa1.06□□□□□ -2.24
SSR3-208ENST00000496050 Q56UQ5 140 aa1.06□□□□□ -2.24
SSR3-208ENST00000496050 C10orf99Q6UWK7 81 aa1.06□□□□□ -2.24
SSR3-208ENST00000496050 RPRMQ9NS64 109 aa1.06□□□□□ -2.24
SSR3-208ENST00000496050 HELZP42694 1942 aaKnown RBP1.06□□□□□ -2.24
SSR3-208ENST00000496050 MYH13Q9UKX3 1938 aa1.06□□□□□ -2.24
SSR3-208ENST00000496050 CFTRP13569 1480 aa1.05□□□□□ -2.24
SSR3-208ENST00000496050 CDK12Q9NYV4 1490 aaPredicted RBP1.05□□□□□ -2.24
SSR3-208ENST00000496050 MRC2Q9UBG0 1479 aa1.05□□□□□ -2.24
SSR3-208ENST00000496050 ATG2AQ2TAZ0 1938 aa1.05□□□□□ -2.24
SSR3-208ENST00000496050 NDUFB6O95139 128 aa1.05□□□□□ -2.24
SSR3-208ENST00000496050 IL7P13232 177 aa1.05□□□□□ -2.24
SSR3-208ENST00000496050 ZNF137PP52743 207 aa1.05□□□□□ -2.24
SSR3-208ENST00000496050 Q6AWC8 147 aa1.05□□□□□ -2.24
SSR3-208ENST00000496050 SPATA8Q6RVD6 105 aa1.05□□□□□ -2.24
SSR3-208ENST00000496050 LYPD5Q6UWN5 251 aa1.05□□□□□ -2.24
SSR3-208ENST00000496050 NDUFA11Q86Y39 141 aa1.05□□□□□ -2.24
SSR3-208ENST00000496050 LSM10Q969L4 123 aaKnown RBP1.05□□□□□ -2.24
SSR3-208ENST00000496050 CCNB3Q8WWL7 1395 aa1.05□□□□□ -2.24
SSR3-208ENST00000496050 KIAA1109Q2LD37 5005 aa1.04□□□□□ -2.24
SSR3-208ENST00000496050 BCORL1Q5H9F3 1711 aa1.04□□□□□ -2.24
SSR3-208ENST00000496050 HIGD1CA8MV81 97 aa1.04□□□□□ -2.24
SSR3-208ENST00000496050 MCRIP1C9JLW8 97 aa1.04□□□□□ -2.24
SSR3-208ENST00000496050 APOC4-APOC2K7ER74 178 aa1.04□□□□□ -2.24
SSR3-208ENST00000496050 APOC2P02655 101 aa1.04□□□□□ -2.24
SSR3-208ENST00000496050 PIRTP0C851 137 aa1.04□□□□□ -2.24
SSR3-208ENST00000496050 SLC25A6P12236 298 aa1.04□□□□□ -2.24
SSR3-208ENST00000496050 TPPP2P59282 170 aa1.04□□□□□ -2.24
SSR3-208ENST00000496050 PPP3R1P63098 170 aa1.04□□□□□ -2.24
SSR3-208ENST00000496050 SPANXN1Q5VSR9 72 aa1.04□□□□□ -2.24
SSR3-208ENST00000496050 SPTSSAQ969W0 71 aa1.04□□□□□ -2.24
SSR3-208ENST00000496050 TMEM141Q96I45 108 aa1.04□□□□□ -2.24
SSR3-208ENST00000496050 C10orf95Q9H7T3 257 aa1.04□□□□□ -2.24
SSR3-208ENST00000496050 TMEM242Q9NWH2 141 aa1.04□□□□□ -2.24
SSR3-208ENST00000496050 NDUFA12Q9UI09 145 aa1.04□□□□□ -2.24
SSR3-208ENST00000496050 AKAP11Q9UKA4 1901 aa1.04□□□□□ -2.24
SSR3-208ENST00000496050 USP9XQ93008 2570 aaPredicted RBP1.04□□□□□ -2.24
SSR3-208ENST00000496050 VPS8Q8N3P4 1428 aa1.04□□□□□ -2.24
SSR3-208ENST00000496050 KNTC1P50748 2209 aa1.04□□□□□ -2.24
SSR3-208ENST00000496050 MAST4O15021 2626 aa1.03□□□□□ -2.24
SSR3-208ENST00000496050 SETXQ7Z333 2677 aaKnown RBP1.03□□□□□ -2.24
SSR3-208ENST00000496050 PCLOQ9Y6V0 5065 aa1.03□□□□□ -2.24
SSR3-208ENST00000496050 IGKCP01834 107 aa1.03□□□□□ -2.24
SSR3-208ENST00000496050 S100A8P05109 93 aa1.03□□□□□ -2.24
SSR3-208ENST00000496050 IL5P05113 134 aa1.03□□□□□ -2.24
SSR3-208ENST00000496050 PIPP12273 146 aaPredicted RBP1.03□□□□□ -2.24
SSR3-208ENST00000496050 POLR2JP52435 117 aaKnown RBP1.03□□□□□ -2.24
SSR3-208ENST00000496050 FXYD3Q14802 87 aa1.03□□□□□ -2.24
SSR3-208ENST00000496050 C6orf52Q5T4I8 152 aa1.03□□□□□ -2.24
SSR3-208ENST00000496050 UNQ5815/PRO19632Q6UWF5 114 aa1.03□□□□□ -2.24
SSR3-208ENST00000496050 DEFB132Q7Z7B7 95 aa1.03□□□□□ -2.24
SSR3-208ENST00000496050 ACBD7Q8N6N7 88 aa1.03□□□□□ -2.24
SSR3-208ENST00000496050 PLAC4Q8WY50 150 aa1.03□□□□□ -2.24
SSR3-208ENST00000496050 ATG5Q9H1Y0 275 aa1.03□□□□□ -2.24
SSR3-208ENST00000496050 MYOM2P54296 1465 aa1.03□□□□□ -2.24
SSR3-208ENST00000496050 MYH7P12883 1935 aa1.03□□□□□ -2.25
SSR3-208ENST00000496050 A0A0D9SG42 100 aa1.02□□□□□ -2.25
SSR3-208ENST00000496050 SNAPC5O75971 98 aa1.02□□□□□ -2.25
SSR3-208ENST00000496050 HSD52Q0P140 79 aa1.02□□□□□ -2.25
SSR3-208ENST00000496050 CATR1Q13166 79 aa1.02□□□□□ -2.25
SSR3-208ENST00000496050 C9orf116Q5BN46 136 aaPredicted RBP1.02□□□□□ -2.25
SSR3-208ENST00000496050 C12orf73Q69YU5 71 aa1.02□□□□□ -2.25
SSR3-208ENST00000496050 KIF13AQ9H1H9 1805 aa1.02□□□□□ -2.25
SSR3-208ENST00000496050 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
SSR3-208ENST00000496050 BPTFQ12830 3046 aa1.02□□□□□ -2.25
SSR3-208ENST00000496050 CASZ1Q86V15 1759 aa1.01□□□□□ -2.25
SSR3-208ENST00000496050 MUC2Q02817 5179 aa1.01□□□□□ -2.25
SSR3-208ENST00000496050 SMARCA2P51531 1590 aa1.01□□□□□ -2.25
SSR3-208ENST00000496050 PZPP20742 1482 aa1.01□□□□□ -2.25
SSR3-208ENST00000496050 KTN1Q86UP2 1357 aaKnown RBP1.01□□□□□ -2.25
SSR3-208ENST00000496050 TRAV30A0A087WSZ9 112 aa1.01□□□□□ -2.25
SSR3-208ENST00000496050 TRBV10-1A0A0K0K1A3 114 aa1.01□□□□□ -2.25
SSR3-208ENST00000496050 NBDYA0A0U1RRE5 68 aa1.01□□□□□ -2.25
SSR3-208ENST00000496050 TMEM218A2RU14 115 aa1.01□□□□□ -2.25
SSR3-208ENST00000496050 OOSP1A8MZH6 123 aa1.01□□□□□ -2.25
SSR3-208ENST00000496050 SNCGO76070 127 aa1.01□□□□□ -2.25
SSR3-208ENST00000496050 CBLN1P23435 193 aa1.01□□□□□ -2.25
SSR3-208ENST00000496050 SPINK13Q1W4C9 94 aa1.01□□□□□ -2.25
SSR3-208ENST00000496050 MRPL54Q6P161 138 aaKnown RBP1.01□□□□□ -2.25
SSR3-208ENST00000496050 KRTAP19-3Q7Z4W3 81 aa1.01□□□□□ -2.25
SSR3-208ENST00000496050 C8orf59Q8N0T1 100 aaPredicted RBP1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms