RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 GAS8-AS1O95177 125 aa10.32□□□□□ -0.76
CUX1-209ENST00000487284 FAM19A2Q8N3H0 131 aa10.32□□□□□ -0.76
CUX1-209ENST00000487284 POM121L12Q8N7R1 296 aa10.32□□□□□ -0.76
CUX1-209ENST00000487284 GSN-AS1Q9NRJ2 163 aa10.32□□□□□ -0.76
CUX1-209ENST00000487284 TNFRSF6BO95407 300 aa10.31□□□□□ -0.76
CUX1-209ENST00000487284 LINC00315P59091 139 aa10.31□□□□□ -0.76
CUX1-209ENST00000487284 KPRPQ5T749 579 aaPredicted RBP10.31□□□□□ -0.76
CUX1-209ENST00000487284 C1orf158Q8N1D5 194 aa10.31□□□□□ -0.76
CUX1-209ENST00000487284 NRACQ8N912 160 aa10.31□□□□□ -0.76
CUX1-209ENST00000487284 PRSS3P2Q8NHM4 247 aa10.31□□□□□ -0.76
CUX1-209ENST00000487284 GIG44P09565 113 aaPredicted RBP10.31□□□□□ -0.76
CUX1-209ENST00000487284 GATA1P15976 413 aaPredicted RBP10.31□□□□□ -0.76
CUX1-209ENST00000487284 IFI27P40305 119 aaPredicted RBP10.31□□□□□ -0.76
CUX1-209ENST00000487284 ZNF415Q09FC8 603 aa10.31□□□□□ -0.76
CUX1-209ENST00000487284 FA2HQ7L5A8 372 aa10.31□□□□□ -0.76
CUX1-209ENST00000487284 LINC01587Q99440 93 aa10.31□□□□□ -0.76
CUX1-209ENST00000487284 MAP1LC3AQ9H492 121 aa10.31□□□□□ -0.76
CUX1-209ENST00000487284 AP5S1Q9NUS5 200 aa10.31□□□□□ -0.76
CUX1-209ENST00000487284 IGHV1-24A0A0C4DH33 117 aa10.3□□□□□ -0.76
CUX1-209ENST00000487284 PRSS47A8MTI9 375 aa10.3□□□□□ -0.76
CUX1-209ENST00000487284 PRB2P02812 416 aaPredicted RBP10.3□□□□□ -0.76
CUX1-209ENST00000487284 RPL35AP18077 110 aaKnown RBP10.3□□□□□ -0.76
CUX1-209ENST00000487284 MORN3Q6PF18 240 aaPredicted RBP10.3□□□□□ -0.76
CUX1-209ENST00000487284 C11orf72Q8NBR9 251 aa10.3□□□□□ -0.76
CUX1-209ENST00000487284 PTH2Q96A98 100 aa10.3□□□□□ -0.76
CUX1-209ENST00000487284 TRAV26-2A0A0B4J265 109 aa10.29□□□□□ -0.76
CUX1-209ENST00000487284 LOC389332A0A1B0GUA5 103 aa10.29□□□□□ -0.76
CUX1-209ENST00000487284 LINC01546A6NGU7 62 aa10.29□□□□□ -0.76
CUX1-209ENST00000487284 PIK3CD-AS1Q5SR53 167 aa10.29□□□□□ -0.76
CUX1-209ENST00000487284 C1QTNF4Q9BXJ3 329 aa10.29□□□□□ -0.76
CUX1-209ENST00000487284 JPT2Q9H910 190 aa10.29□□□□□ -0.76
CUX1-209ENST00000487284 MGPP08493 103 aa10.28□□□□□ -0.76
CUX1-209ENST00000487284 SMIM17P0DL12 118 aa10.28□□□□□ -0.76
CUX1-209ENST00000487284 IGHV4-30-4P0DP06 118 aa10.28□□□□□ -0.76
CUX1-209ENST00000487284 HTN1P15515 57 aa10.28□□□□□ -0.76
CUX1-209ENST00000487284 ZNF876PQ49A33 203 aa10.28□□□□□ -0.76
CUX1-209ENST00000487284 CDPF1Q6NVV7 123 aa10.28□□□□□ -0.76
CUX1-209ENST00000487284 NXT2Q9NPJ8 142 aaKnown RBP10.28□□□□□ -0.76
CUX1-209ENST00000487284 NIT2Q9NQR4 276 aa10.28□□□□□ -0.76
CUX1-209ENST00000487284 PRM2P04554 102 aa10.27□□□□□ -0.76
CUX1-209ENST00000487284 PMCHL1Q16048 86 aa10.27□□□□□ -0.76
CUX1-209ENST00000487284 RASL10AQ92737 203 aa10.27□□□□□ -0.76
CUX1-209ENST00000487284 SPXQ9BT56 116 aa10.27□□□□□ -0.76
CUX1-209ENST00000487284 TMEM208Q9BTX3 173 aa10.27□□□□□ -0.76
CUX1-209ENST00000487284 IGLV2-18A0A075B6J9 118 aa10.26□□□□□ -0.77
CUX1-209ENST00000487284 M0R2P5 195 aa10.26□□□□□ -0.77
CUX1-209ENST00000487284 CRYGDP07320 174 aa10.26□□□□□ -0.77
CUX1-209ENST00000487284 Q8N8P6 123 aa10.26□□□□□ -0.77
CUX1-209ENST00000487284 CSNK1G2-AS1Q8NCQ2 148 aa10.26□□□□□ -0.77
CUX1-209ENST00000487284 IL17DQ8TAD2 202 aa10.26□□□□□ -0.77
CUX1-209ENST00000487284 A0A087WWL8 130 aa10.26□□□□□ -0.77
CUX1-209ENST00000487284 GOLT1BQ9Y3E0 138 aa10.26□□□□□ -0.77
CUX1-209ENST00000487284 A0A096LNJ9 63 aa10.25□□□□□ -0.77
CUX1-209ENST00000487284 PPP1R17O96001 155 aa10.25□□□□□ -0.77
CUX1-209ENST00000487284 C3orf79P0CE67 100 aa10.25□□□□□ -0.77
CUX1-209ENST00000487284 AZU1P20160 251 aa10.25□□□□□ -0.77
CUX1-209ENST00000487284 KRTDAPP60985 99 aa10.25□□□□□ -0.77
CUX1-209ENST00000487284 SUMO4Q6EEV6 95 aa10.25□□□□□ -0.77
CUX1-209ENST00000487284 RNASE8Q8TDE3 154 aaKnown RBP10.25□□□□□ -0.77
CUX1-209ENST00000487284 C20orf78Q9BR46 151 aa10.25□□□□□ -0.77
CUX1-209ENST00000487284 NBEAL2Q6ZNJ1 2754 aa10.24□□□□□ -0.77
CUX1-209ENST00000487284 IGHV3OR16-12A0A075B7B8 117 aa10.24□□□□□ -0.77
CUX1-209ENST00000487284 K7EIL1 84 aa10.24□□□□□ -0.77
CUX1-209ENST00000487284 LEPROTL1O95214 131 aa10.24□□□□□ -0.77
CUX1-209ENST00000487284 SCGB1D1O95968 90 aa10.24□□□□□ -0.77
CUX1-209ENST00000487284 SUMO2P61956 95 aaKnown RBP10.24□□□□□ -0.77
CUX1-209ENST00000487284 TMEM263Q8WUH6 116 aaKnown RBP10.24□□□□□ -0.77
CUX1-209ENST00000487284 RPL39LQ96EH5 51 aaKnown RBP10.24□□□□□ -0.77
CUX1-209ENST00000487284 NDUFAF3Q9BU61 184 aa10.24□□□□□ -0.77
CUX1-209ENST00000487284 SMIM2Q9BVW6 85 aa10.24□□□□□ -0.77
CUX1-209ENST00000487284 A8MWV9 139 aa10.23□□□□□ -0.77
CUX1-209ENST00000487284 A8MZ25 164 aa10.23□□□□□ -0.77
CUX1-209ENST00000487284 FAM74A4Q5TZK3 123 aa10.23□□□□□ -0.77
CUX1-209ENST00000487284 ZNF705AQ6ZN79 300 aaPredicted RBP10.23□□□□□ -0.77
CUX1-209ENST00000487284 Q8N976 141 aa10.23□□□□□ -0.77
CUX1-209ENST00000487284 CSTL1Q9H114 145 aa10.23□□□□□ -0.77
CUX1-209ENST00000487284 HBDP02042 147 aa10.22□□□□□ -0.77
CUX1-209ENST00000487284 RPL32P62910 135 aaKnown RBP10.22□□□□□ -0.77
CUX1-209ENST00000487284 LINC00173Q6ZV60 143 aa10.22□□□□□ -0.77
CUX1-209ENST00000487284 F5H697 171 aa10.22□□□□□ -0.77
CUX1-209ENST00000487284 BTF3P20290 206 aaKnown RBP10.22□□□□□ -0.77
CUX1-209ENST00000487284 ZNF56Q15929 161 aa10.22□□□□□ -0.77
CUX1-209ENST00000487284 UFSP1Q6NVU6 142 aa10.22□□□□□ -0.77
CUX1-209ENST00000487284 EDA2RQ9HAV5 297 aa10.22□□□□□ -0.77
CUX1-209ENST00000487284 HSPB8Q9UJY1 196 aa10.22□□□□□ -0.77
CUX1-209ENST00000487284 FBN3Q75N90 2809 aa10.22□□□□□ -0.77
CUX1-209ENST00000487284 MEGF8Q7Z7M0 2845 aa10.21□□□□□ -0.77
CUX1-209ENST00000487284 KIR2DL5BA0A0G2JN68 375 aa10.21□□□□□ -0.78
CUX1-209ENST00000487284 KIR2DL5BA0A0G2JPC4 375 aa10.21□□□□□ -0.78
CUX1-209ENST00000487284 TRBV6-5A0A0K0K1A5 114 aa10.21□□□□□ -0.78
CUX1-209ENST00000487284 M0QY20 66 aa10.21□□□□□ -0.78
CUX1-209ENST00000487284 APOC4P55056 127 aa10.21□□□□□ -0.78
CUX1-209ENST00000487284 KIR2DL5AQ8N109 375 aa10.21□□□□□ -0.78
CUX1-209ENST00000487284 KIR2DL5BQ8NHK3 375 aa10.21□□□□□ -0.78
CUX1-209ENST00000487284 MRPL16Q9NX20 251 aaKnown RBP10.21□□□□□ -0.78
CUX1-209ENST00000487284 K7EMI3 77 aa10.2□□□□□ -0.78
CUX1-209ENST00000487284 FCER1GP30273 86 aa10.2□□□□□ -0.78
CUX1-209ENST00000487284 C16orf74Q96GX8 76 aa10.2□□□□□ -0.78
CUX1-209ENST00000487284 TMEM70Q9BUB7 260 aa10.2□□□□□ -0.78
CUX1-209ENST00000487284 PLAC8L1A1L4L8 177 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms