RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 PKIAP61925 76 aa12.2□□□□□ -0.46
CTSA-207ENST00000484855 ZNF664Q8N3J9 261 aa12.2□□□□□ -0.46
CTSA-207ENST00000484855 DEFB125Q8N687 156 aa12.2□□□□□ -0.46
CTSA-207ENST00000484855 PRO1933Q9H354 126 aa12.2□□□□□ -0.46
CTSA-207ENST00000484855 RPL39LQ96EH5 51 aaKnown RBP12.2□□□□□ -0.46
CTSA-207ENST00000484855 TMEM208Q9BTX3 173 aa12.2□□□□□ -0.46
CTSA-207ENST00000484855 TENM1Q9UKZ4 2725 aa12.2□□□□□ -0.46
CTSA-207ENST00000484855 IGLV2-18A0A075B6J9 118 aa12.19□□□□□ -0.46
CTSA-207ENST00000484855 TSTD3H0UI37 97 aa12.19□□□□□ -0.46
CTSA-207ENST00000484855 FAM74A4Q5TZK3 123 aa12.19□□□□□ -0.46
CTSA-207ENST00000484855 MAP1LC3CQ9BXW4 147 aa12.19□□□□□ -0.46
CTSA-207ENST00000484855 INSL3P51460 131 aa12.19□□□□□ -0.46
CTSA-207ENST00000484855 C9orf66Q5T8R8 295 aa12.19□□□□□ -0.46
CTSA-207ENST00000484855 JMJD1CQ15652 2540 aa12.19□□□□□ -0.46
CTSA-207ENST00000484855 F5H697 171 aa12.18□□□□□ -0.46
CTSA-207ENST00000484855 SYS1-DBNDD2H3BUS1 97 aa12.18□□□□□ -0.46
CTSA-207ENST00000484855 PPP1R17O96001 155 aa12.18□□□□□ -0.46
CTSA-207ENST00000484855 SUMO2P61956 95 aaKnown RBP12.18□□□□□ -0.46
CTSA-207ENST00000484855 SUMO4Q6EEV6 95 aa12.18□□□□□ -0.46
CTSA-207ENST00000484855 C1orf158Q8N1D5 194 aa12.18□□□□□ -0.46
CTSA-207ENST00000484855 SPATA3Q8NHX4 192 aa12.18□□□□□ -0.46
CTSA-207ENST00000484855 ZNF747Q9BV97 191 aa12.18□□□□□ -0.46
CTSA-207ENST00000484855 SMIM2Q9BVW6 85 aa12.18□□□□□ -0.46
CTSA-207ENST00000484855 TEP1Q99973 2627 aaKnown RBP12.18□□□□□ -0.46
CTSA-207ENST00000484855 IGHV3OR16-12A0A075B7B8 117 aa12.18□□□□□ -0.46
CTSA-207ENST00000484855 C20orf78Q9BR46 151 aa12.18□□□□□ -0.46
CTSA-207ENST00000484855 VAMP8Q9BV40 100 aa12.18□□□□□ -0.46
CTSA-207ENST00000484855 M0R2P5 195 aa12.17□□□□□ -0.46
CTSA-207ENST00000484855 CRYGDP07320 174 aa12.17□□□□□ -0.46
CTSA-207ENST00000484855 RPL35AP18077 110 aaKnown RBP12.17□□□□□ -0.46
CTSA-207ENST00000484855 ZNF56Q15929 161 aa12.17□□□□□ -0.46
CTSA-207ENST00000484855 SPATA12Q7Z6I5 190 aa12.17□□□□□ -0.46
CTSA-207ENST00000484855 C11orf72Q8NBR9 251 aa12.17□□□□□ -0.46
CTSA-207ENST00000484855 ATRQ13535 2644 aa12.16□□□□□ -0.46
CTSA-207ENST00000484855 H0Y8G0 127 aa12.16□□□□□ -0.46
CTSA-207ENST00000484855 FCER1GP30273 86 aa12.16□□□□□ -0.46
CTSA-207ENST00000484855 C20orf202A1L168 122 aa12.15□□□□□ -0.46
CTSA-207ENST00000484855 CYSRT1A8MQ03 144 aa12.15□□□□□ -0.46
CTSA-207ENST00000484855 TCAPO15273 167 aa12.15□□□□□ -0.46
CTSA-207ENST00000484855 LAGE3Q14657 143 aa12.15□□□□□ -0.46
CTSA-207ENST00000484855 PET117Q6UWS5 81 aa12.15□□□□□ -0.46
CTSA-207ENST00000484855 GTSCR1Q86UQ5 136 aa12.15□□□□□ -0.46
CTSA-207ENST00000484855 PAM16Q9Y3D7 125 aa12.15□□□□□ -0.46
CTSA-207ENST00000484855 VWFP04275 2813 aa12.15□□□□□ -0.46
CTSA-207ENST00000484855 ATOH7Q8N100 152 aa12.15□□□□□ -0.47
CTSA-207ENST00000484855 SPXQ9BT56 116 aa12.15□□□□□ -0.47
CTSA-207ENST00000484855 KIR2DL5BA0A0G2JN68 375 aa12.14□□□□□ -0.47
CTSA-207ENST00000484855 KIR2DL5BA0A0G2JPC4 375 aa12.14□□□□□ -0.47
CTSA-207ENST00000484855 LINC00587B1AMM8 73 aa12.14□□□□□ -0.47
CTSA-207ENST00000484855 GIG44P09565 113 aaPredicted RBP12.14□□□□□ -0.47
CTSA-207ENST00000484855 KIR2DL5AQ8N109 375 aa12.14□□□□□ -0.47
CTSA-207ENST00000484855 TMEM158Q8WZ71 300 aa12.14□□□□□ -0.47
CTSA-207ENST00000484855 NACAE9PAV3 2078 aa12.14□□□□□ -0.47
CTSA-207ENST00000484855 AZU1P20160 251 aa12.13□□□□□ -0.47
CTSA-207ENST00000484855 PIK3CD-AS1Q5SR53 167 aa12.13□□□□□ -0.47
CTSA-207ENST00000484855 MORN3Q6PF18 240 aaPredicted RBP12.13□□□□□ -0.47
CTSA-207ENST00000484855 PTH2Q96A98 100 aa12.13□□□□□ -0.47
CTSA-207ENST00000484855 C1QTNF4Q9BXJ3 329 aa12.13□□□□□ -0.47
CTSA-207ENST00000484855 ST20Q9HBF5 79 aa12.13□□□□□ -0.47
CTSA-207ENST00000484855 GOLT1BQ9Y3E0 138 aa12.13□□□□□ -0.47
CTSA-207ENST00000484855 A8MWV9 139 aa12.12□□□□□ -0.47
CTSA-207ENST00000484855 KRTAP24-1Q3LI83 254 aa12.12□□□□□ -0.47
CTSA-207ENST00000484855 IFI27L1Q96BM0 104 aa12.12□□□□□ -0.47
CTSA-207ENST00000484855 CSTL1Q9H114 145 aa12.12□□□□□ -0.47
CTSA-207ENST00000484855 MCRIP2Q9BUT9 160 aaKnown RBP12.12□□□□□ -0.47
CTSA-207ENST00000484855 ORMDL2Q53FV1 153 aa12.11□□□□□ -0.47
CTSA-207ENST00000484855 C18orf15Q96N68 181 aa12.11□□□□□ -0.47
CTSA-207ENST00000484855 MRPL16Q9NX20 251 aaKnown RBP12.11□□□□□ -0.47
CTSA-207ENST00000484855 K7EMI3 77 aa12.11□□□□□ -0.47
CTSA-207ENST00000484855 M0QY20 66 aa12.11□□□□□ -0.47
CTSA-207ENST00000484855 NUDT3O95989 172 aa12.11□□□□□ -0.47
CTSA-207ENST00000484855 DDTP30046 118 aa12.11□□□□□ -0.47
CTSA-207ENST00000484855 RPL32P62910 135 aaKnown RBP12.11□□□□□ -0.47
CTSA-207ENST00000484855 LINC01545Q5VT33 79 aa12.11□□□□□ -0.47
CTSA-207ENST00000484855 RNASE8Q8TDE3 154 aaKnown RBP12.11□□□□□ -0.47
CTSA-207ENST00000484855 TMEM263Q8WUH6 116 aaKnown RBP12.11□□□□□ -0.47
CTSA-207ENST00000484855 SPATA45Q537H7 98 aa12.1□□□□□ -0.47
CTSA-207ENST00000484855 ZNF705AQ6ZN79 300 aaPredicted RBP12.1□□□□□ -0.47
CTSA-207ENST00000484855 IL17DQ8TAD2 202 aa12.1□□□□□ -0.47
CTSA-207ENST00000484855 IGHV3-73A0A0B4J1V6 119 aa12.09□□□□□ -0.47
CTSA-207ENST00000484855 TRBV6-5A0A0K0K1A5 114 aa12.09□□□□□ -0.47
CTSA-207ENST00000484855 POLR2KP53803 58 aaKnown RBP12.09□□□□□ -0.47
CTSA-207ENST00000484855 CFAP126Q5VTH2 177 aa12.09□□□□□ -0.47
CTSA-207ENST00000484855 NEGR1Q7Z3B1 354 aa12.09□□□□□ -0.47
CTSA-207ENST00000484855 TRAV9-2A0A087WT02 112 aa12.08□□□□□ -0.48
CTSA-207ENST00000484855 SDHAF1A6NFY7 115 aa12.08□□□□□ -0.48
CTSA-207ENST00000484855 H7C1H1 209 aa12.08□□□□□ -0.48
CTSA-207ENST00000484855 MAJINQ3KP22 176 aa12.08□□□□□ -0.48
CTSA-207ENST00000484855 UFSP1Q6NVU6 142 aa12.08□□□□□ -0.48
CTSA-207ENST00000484855 CSNK1G2-AS1Q8NCQ2 148 aa12.08□□□□□ -0.48
CTSA-207ENST00000484855 PMCHL2Q9BQD1 86 aa12.08□□□□□ -0.48
CTSA-207ENST00000484855 IGLL1P15814 213 aa12.08□□□□□ -0.48
CTSA-207ENST00000484855 WFDC9Q8NEX5 89 aa12.08□□□□□ -0.48
CTSA-207ENST00000484855 NDUFAF3Q9BU61 184 aa12.08□□□□□ -0.48
CTSA-207ENST00000484855 NOTCH3Q9UM47 2321 aa12.07□□□□□ -0.48
CTSA-207ENST00000484855 RHODO00212 210 aa12.07□□□□□ -0.48
CTSA-207ENST00000484855 VCYO14598 125 aa12.07□□□□□ -0.48
CTSA-207ENST00000484855 EDA2RQ9HAV5 297 aa12.07□□□□□ -0.48
CTSA-207ENST00000484855 TRRAPQ9Y4A5 3859 aa12.06□□□□□ -0.48
CTSA-207ENST00000484855 ATP5LO75964 103 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms