RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 FRAS1Q86XX4 4008 aa3.97□□□□□ -1.77
COL17A1-206ENST00000483876 A0A1W2PRX2 142 aa3.97□□□□□ -1.77
COL17A1-206ENST00000483876 OR11H12B2RN74 326 aa3.97□□□□□ -1.77
COL17A1-206ENST00000483876 H3BVH4 76 aa3.97□□□□□ -1.77
COL17A1-206ENST00000483876 M0R381 172 aa3.97□□□□□ -1.77
COL17A1-206ENST00000483876 SAP30O75446 220 aa3.97□□□□□ -1.77
COL17A1-206ENST00000483876 CD7P09564 240 aa3.97□□□□□ -1.77
COL17A1-206ENST00000483876 EVI2AP22794 236 aa3.97□□□□□ -1.77
COL17A1-206ENST00000483876 RPL32P62910 135 aaKnown RBP3.97□□□□□ -1.77
COL17A1-206ENST00000483876 KIR3DS1Q14943 382 aa3.97□□□□□ -1.77
COL17A1-206ENST00000483876 ODF3L2Q3SX64 289 aa3.97□□□□□ -1.77
COL17A1-206ENST00000483876 MUC21Q5SSG8 566 aa3.97□□□□□ -1.77
COL17A1-206ENST00000483876 Q6ZWC4 215 aa3.97□□□□□ -1.77
COL17A1-206ENST00000483876 FA2HQ7L5A8 372 aa3.97□□□□□ -1.77
COL17A1-206ENST00000483876 SPATA12Q7Z6I5 190 aa3.97□□□□□ -1.77
COL17A1-206ENST00000483876 LINC00482Q8N8I6 264 aa3.97□□□□□ -1.77
COL17A1-206ENST00000483876 SYT8Q8NBV8 401 aa3.97□□□□□ -1.77
COL17A1-206ENST00000483876 WFDC9Q8NEX5 89 aa3.97□□□□□ -1.77
COL17A1-206ENST00000483876 KRTAP4-5Q9BYR2 181 aa3.97□□□□□ -1.77
COL17A1-206ENST00000483876 SELENOKQ9Y6D0 94 aa3.97□□□□□ -1.77
COL17A1-206ENST00000483876 KIF25-AS1Q9Y6Z4 181 aa3.97□□□□□ -1.77
COL17A1-206ENST00000483876 MUC21A0A0G2JKD1 596 aa3.96□□□□□ -1.78
COL17A1-206ENST00000483876 MUC21A0A140T8X8 626 aa3.96□□□□□ -1.78
COL17A1-206ENST00000483876 LINC01549A6NIU2 74 aa3.96□□□□□ -1.78
COL17A1-206ENST00000483876 KNCNA6PVL3 124 aa3.96□□□□□ -1.78
COL17A1-206ENST00000483876 J3KRW8 73 aa3.96□□□□□ -1.78
COL17A1-206ENST00000483876 M0R2Z0 102 aa3.96□□□□□ -1.78
COL17A1-206ENST00000483876 TNFRSF6BO95407 300 aa3.96□□□□□ -1.78
COL17A1-206ENST00000483876 SCGB1D1O95968 90 aa3.96□□□□□ -1.78
COL17A1-206ENST00000483876 BTF3P20290 206 aaKnown RBP3.96□□□□□ -1.78
COL17A1-206ENST00000483876 G0S2P27469 103 aa3.96□□□□□ -1.78
COL17A1-206ENST00000483876 IFI27P40305 119 aaPredicted RBP3.96□□□□□ -1.78
COL17A1-206ENST00000483876 LINC00315P59091 139 aa3.96□□□□□ -1.78
COL17A1-206ENST00000483876 PMCHL1Q16048 86 aa3.96□□□□□ -1.78
COL17A1-206ENST00000483876 SPINK13Q1W4C9 94 aa3.96□□□□□ -1.78
COL17A1-206ENST00000483876 NSUN5P1Q3KNT7 163 aa3.96□□□□□ -1.78
COL17A1-206ENST00000483876 RNASEKQ6P5S7 137 aaKnown RBP3.96□□□□□ -1.78
COL17A1-206ENST00000483876 TRPT1Q86TN4 253 aaKnown RBP3.96□□□□□ -1.78
COL17A1-206ENST00000483876 Q8N1Y9 231 aa3.96□□□□□ -1.78
COL17A1-206ENST00000483876 Q8N8P6 123 aa3.96□□□□□ -1.78
COL17A1-206ENST00000483876 AP1S3Q96PC3 154 aa3.96□□□□□ -1.78
COL17A1-206ENST00000483876 SPXQ9BT56 116 aa3.96□□□□□ -1.78
COL17A1-206ENST00000483876 MCRIP2Q9BUT9 160 aaKnown RBP3.96□□□□□ -1.78
COL17A1-206ENST00000483876 MAP1LC3AQ9H492 121 aa3.96□□□□□ -1.78
COL17A1-206ENST00000483876 C19orf73Q9NVV2 129 aa3.96□□□□□ -1.78
COL17A1-206ENST00000483876 HSPB8Q9UJY1 196 aa3.96□□□□□ -1.78
COL17A1-206ENST00000483876 SORL1Q92673 2214 aa3.96□□□□□ -1.78
COL17A1-206ENST00000483876 DNAH3Q8TD57 4116 aa3.95□□□□□ -1.78
COL17A1-206ENST00000483876 HECTD4Q9Y4D8 3996 aa3.95□□□□□ -1.78
COL17A1-206ENST00000483876 IGLV2-18A0A075B6J9 118 aa3.95□□□□□ -1.78
COL17A1-206ENST00000483876 TRAV12-2A0A075B6T6 113 aa3.95□□□□□ -1.78
COL17A1-206ENST00000483876 IGHV1-24A0A0C4DH33 117 aa3.95□□□□□ -1.78
COL17A1-206ENST00000483876 LEPROTL1O95214 131 aa3.95□□□□□ -1.78
COL17A1-206ENST00000483876 NPYP01303 97 aa3.95□□□□□ -1.78
COL17A1-206ENST00000483876 INSP01308 110 aa3.95□□□□□ -1.78
COL17A1-206ENST00000483876 IGKV3-20P01619 116 aa3.95□□□□□ -1.78
COL17A1-206ENST00000483876 PF4P02776 101 aa3.95□□□□□ -1.78
COL17A1-206ENST00000483876 C3orf79P0CE67 100 aa3.95□□□□□ -1.78
COL17A1-206ENST00000483876 SMIM17P0DL12 118 aa3.95□□□□□ -1.78
COL17A1-206ENST00000483876 FCER1GP30273 86 aa3.95□□□□□ -1.78
COL17A1-206ENST00000483876 SSTP61278 116 aa3.95□□□□□ -1.78
COL17A1-206ENST00000483876 PKIAP61925 76 aa3.95□□□□□ -1.78
COL17A1-206ENST00000483876 MORN3Q6PF18 240 aaPredicted RBP3.95□□□□□ -1.78
COL17A1-206ENST00000483876 PET117Q6UWS5 81 aa3.95□□□□□ -1.78
COL17A1-206ENST00000483876 TEX43Q6ZNM6 134 aa3.95□□□□□ -1.78
COL17A1-206ENST00000483876 STHQ8IWL8 128 aa3.95□□□□□ -1.78
COL17A1-206ENST00000483876 FAM19A2Q8N3H0 131 aa3.95□□□□□ -1.78
COL17A1-206ENST00000483876 C14orf178Q8N769 122 aaPredicted RBP3.95□□□□□ -1.78
COL17A1-206ENST00000483876 NRACQ8N912 160 aa3.95□□□□□ -1.78
COL17A1-206ENST00000483876 TMEM70Q9BUB7 260 aa3.95□□□□□ -1.78
COL17A1-206ENST00000483876 C1QTNF4Q9BXJ3 329 aa3.95□□□□□ -1.78
COL17A1-206ENST00000483876 EDA2RQ9HAV5 297 aa3.95□□□□□ -1.78
COL17A1-206ENST00000483876 MDFICQ9P1T7 246 aa3.95□□□□□ -1.78
COL17A1-206ENST00000483876 TRBV6-5A0A0K0K1A5 114 aa3.94□□□□□ -1.78
COL17A1-206ENST00000483876 C20orf202A1L168 122 aa3.94□□□□□ -1.78
COL17A1-206ENST00000483876 CBY3A6NI87 242 aa3.94□□□□□ -1.78
COL17A1-206ENST00000483876 A8MWV9 139 aa3.94□□□□□ -1.78
COL17A1-206ENST00000483876 M0R2P5 195 aa3.94□□□□□ -1.78
COL17A1-206ENST00000483876 TCAPO15273 167 aa3.94□□□□□ -1.78
COL17A1-206ENST00000483876 CIDEAO60543 219 aa3.94□□□□□ -1.78
COL17A1-206ENST00000483876 HBDP02042 147 aa3.94□□□□□ -1.78
COL17A1-206ENST00000483876 CRYGDP07320 174 aa3.94□□□□□ -1.78
COL17A1-206ENST00000483876 SUMO2P61956 95 aaKnown RBP3.94□□□□□ -1.78
COL17A1-206ENST00000483876 ZNF876PQ49A33 203 aa3.94□□□□□ -1.78
COL17A1-206ENST00000483876 C9orf66Q5T8R8 295 aa3.94□□□□□ -1.78
COL17A1-206ENST00000483876 Q8N976 141 aa3.94□□□□□ -1.78
COL17A1-206ENST00000483876 RASL10AQ92737 203 aa3.94□□□□□ -1.78
COL17A1-206ENST00000483876 LINC01587Q99440 93 aa3.94□□□□□ -1.78
COL17A1-206ENST00000483876 MAP1LC3CQ9BXW4 147 aa3.94□□□□□ -1.78
COL17A1-206ENST00000483876 A0A096LNJ9 63 aa3.93□□□□□ -1.78
COL17A1-206ENST00000483876 LOC389332A0A1B0GUA5 103 aa3.93□□□□□ -1.78
COL17A1-206ENST00000483876 TSTD3H0UI37 97 aa3.93□□□□□ -1.78
COL17A1-206ENST00000483876 SMKR1H3BMG3 65 aa3.93□□□□□ -1.78
COL17A1-206ENST00000483876 SYS1-DBNDD2H3BUS1 97 aa3.93□□□□□ -1.78
COL17A1-206ENST00000483876 H7C1H1 209 aa3.93□□□□□ -1.78
COL17A1-206ENST00000483876 VCYO14598 125 aa3.93□□□□□ -1.78
COL17A1-206ENST00000483876 RBMY1A1P0DJD3 496 aaKnown RBP3.93□□□□□ -1.78
COL17A1-206ENST00000483876 RBMY1CP0DJD4 496 aa3.93□□□□□ -1.78
COL17A1-206ENST00000483876 POLR2KP53803 58 aaKnown RBP3.93□□□□□ -1.78
COL17A1-206ENST00000483876 KRTDAPP60985 99 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms