RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 LINC00315P59091 139 aa8.17□□□□□ -1.1
HLA-DMB-260ENST00000477537 DLX4Q92988 240 aaPredicted RBP8.17□□□□□ -1.1
HLA-DMB-260ENST00000477537 C9orf85Q96MD7 179 aa8.17□□□□□ -1.1
HLA-DMB-260ENST00000477537 TMEM208Q9BTX3 173 aa8.17□□□□□ -1.1
HLA-DMB-260ENST00000477537 MDFICQ9P1T7 246 aa8.17□□□□□ -1.1
HLA-DMB-260ENST00000477537 A0A087WWL8 130 aa8.17□□□□□ -1.1
HLA-DMB-260ENST00000477537 PPP1R17O96001 155 aa8.17□□□□□ -1.1
HLA-DMB-260ENST00000477537 DEFB131AP59861 70 aa8.17□□□□□ -1.1
HLA-DMB-260ENST00000477537 KRTAP1-1Q07627 177 aa8.17□□□□□ -1.1
HLA-DMB-260ENST00000477537 ORMDL2Q53FV1 153 aa8.17□□□□□ -1.1
HLA-DMB-260ENST00000477537 AMTNQ6UX39 209 aa8.17□□□□□ -1.1
HLA-DMB-260ENST00000477537 C2orf91Q6ZV80 131 aa8.17□□□□□ -1.1
HLA-DMB-260ENST00000477537 Q8N1Y9 231 aa8.17□□□□□ -1.1
HLA-DMB-260ENST00000477537 ZMAT4Q9H898 229 aa8.17□□□□□ -1.1
HLA-DMB-260ENST00000477537 NF1P21359 2839 aa8.16□□□□□ -1.1
HLA-DMB-260ENST00000477537 NIPBLQ6KC79 2804 aaeCLIP8.16□□□□□ -1.1
HLA-DMB-260ENST00000477537 HIVEP2P31629 2446 aa8.16□□□□□ -1.1
HLA-DMB-260ENST00000477537 IGKCP01834 107 aa8.16□□□□□ -1.1
HLA-DMB-260ENST00000477537 BVES-AS1Q5T3Y7 98 aa8.16□□□□□ -1.1
HLA-DMB-260ENST00000477537 DYNLRB2Q8TF09 96 aa8.16□□□□□ -1.1
HLA-DMB-260ENST00000477537 CSTL1Q9H114 145 aa8.16□□□□□ -1.1
HLA-DMB-260ENST00000477537 F5H697 171 aa8.15□□□□□ -1.1
HLA-DMB-260ENST00000477537 DLEU1O43261 78 aa8.15□□□□□ -1.1
HLA-DMB-260ENST00000477537 DPM2O94777 84 aa8.15□□□□□ -1.1
HLA-DMB-260ENST00000477537 NMUP48645 174 aa8.15□□□□□ -1.1
HLA-DMB-260ENST00000477537 SUMO4Q6EEV6 95 aa8.15□□□□□ -1.1
HLA-DMB-260ENST00000477537 C12orf54Q6X4T0 127 aa8.15□□□□□ -1.1
HLA-DMB-260ENST00000477537 BOD1L2Q8IYS8 172 aa8.15□□□□□ -1.1
HLA-DMB-260ENST00000477537 TMEM61Q8N0U2 210 aa8.15□□□□□ -1.1
HLA-DMB-260ENST00000477537 SYT8Q8NBV8 401 aa8.15□□□□□ -1.1
HLA-DMB-260ENST00000477537 ESM1Q9NQ30 184 aa8.15□□□□□ -1.1
HLA-DMB-260ENST00000477537 TRAV2A0A0B4J234 112 aa8.15□□□□□ -1.11
HLA-DMB-260ENST00000477537 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.15□□□□□ -1.11
HLA-DMB-260ENST00000477537 K7EMI3 77 aa8.15□□□□□ -1.11
HLA-DMB-260ENST00000477537 Q6ZVH6 145 aa8.15□□□□□ -1.11
HLA-DMB-260ENST00000477537 NEGR1Q7Z3B1 354 aa8.15□□□□□ -1.11
HLA-DMB-260ENST00000477537 TOMM6Q96B49 74 aa8.15□□□□□ -1.11
HLA-DMB-260ENST00000477537 SCGB3A1Q96QR1 104 aa8.15□□□□□ -1.11
HLA-DMB-260ENST00000477537 YAE1D1Q9NRH1 226 aa8.15□□□□□ -1.11
HLA-DMB-260ENST00000477537 A0A087WX48 190 aa8.14□□□□□ -1.11
HLA-DMB-260ENST00000477537 HLA-DRB4P13762 266 aa8.14□□□□□ -1.11
HLA-DMB-260ENST00000477537 FAM74A4Q5TZK3 123 aa8.14□□□□□ -1.11
HLA-DMB-260ENST00000477537 PCP2Q8IVA1 136 aa8.14□□□□□ -1.11
HLA-DMB-260ENST00000477537 C11orf44Q8N8P7 122 aa8.14□□□□□ -1.11
HLA-DMB-260ENST00000477537 TMEM160Q9NX00 188 aa8.14□□□□□ -1.11
HLA-DMB-260ENST00000477537 MRPL35Q9NZE8 188 aaKnown RBP8.14□□□□□ -1.11
HLA-DMB-260ENST00000477537 HHLA3Q9XRX5 114 aa8.14□□□□□ -1.11
HLA-DMB-260ENST00000477537 HLA-DRB4X5D2U9 266 aa8.14□□□□□ -1.11
HLA-DMB-260ENST00000477537 TRGV11A0A075B6L2 103 aa8.13□□□□□ -1.11
HLA-DMB-260ENST00000477537 H3BMM0 161 aa8.13□□□□□ -1.11
HLA-DMB-260ENST00000477537 RBMY1A1P0DJD3 496 aaKnown RBP8.13□□□□□ -1.11
HLA-DMB-260ENST00000477537 RBMY1CP0DJD4 496 aa8.13□□□□□ -1.11
HLA-DMB-260ENST00000477537 GAGE1Q13065 139 aa8.13□□□□□ -1.11
HLA-DMB-260ENST00000477537 RBMY1FQ15415 496 aaKnown RBP8.13□□□□□ -1.11
HLA-DMB-260ENST00000477537 A0A1W2PRX2 142 aa8.13□□□□□ -1.11
HLA-DMB-260ENST00000477537 RBMY1BA6NDE4 496 aaKnown RBP8.13□□□□□ -1.11
HLA-DMB-260ENST00000477537 RBMY1EA6NEQ0 496 aaKnown RBP8.13□□□□□ -1.11
HLA-DMB-260ENST00000477537 CBY3A6NI87 242 aa8.13□□□□□ -1.11
HLA-DMB-260ENST00000477537 RBMY1DP0C7P1 496 aaKnown RBP8.13□□□□□ -1.11
HLA-DMB-260ENST00000477537 DEFB114Q30KQ6 69 aa8.13□□□□□ -1.11
HLA-DMB-260ENST00000477537 C2orf66Q6UXQ4 117 aa8.13□□□□□ -1.11
HLA-DMB-260ENST00000477537 GTSCR1Q86UQ5 136 aa8.13□□□□□ -1.11
HLA-DMB-260ENST00000477537 RAX2Q96IS3 184 aa8.13□□□□□ -1.11
HLA-DMB-260ENST00000477537 COX11Q9Y6N1 276 aa8.13□□□□□ -1.11
HLA-DMB-260ENST00000477537 FN1P02751 2386 aaKnown RBP8.12□□□□□ -1.11
HLA-DMB-260ENST00000477537 IGKV2D-26A0A0A0MRZ7 120 aa8.12□□□□□ -1.11
HLA-DMB-260ENST00000477537 A8MTW9 85 aa8.12□□□□□ -1.11
HLA-DMB-260ENST00000477537 LY6G6DO95868 133 aa8.12□□□□□ -1.11
HLA-DMB-260ENST00000477537 NPSP0C0P6 89 aa8.12□□□□□ -1.11
HLA-DMB-260ENST00000477537 CD28P10747 220 aa8.12□□□□□ -1.11
HLA-DMB-260ENST00000477537 RPL32P62910 135 aaKnown RBP8.12□□□□□ -1.11
HLA-DMB-260ENST00000477537 ZNF56Q15929 161 aa8.12□□□□□ -1.11
HLA-DMB-260ENST00000477537 CD300EQ496F6 205 aaPredicted RBP8.12□□□□□ -1.11
HLA-DMB-260ENST00000477537 ORAOV1Q8WV07 137 aa8.12□□□□□ -1.11
HLA-DMB-260ENST00000477537 MAP6D1Q9H9H5 199 aa8.12□□□□□ -1.11
HLA-DMB-260ENST00000477537 TRAV12-1A0A0B4J245 112 aa8.11□□□□□ -1.11
HLA-DMB-260ENST00000477537 SIVA1O15304 175 aa8.11□□□□□ -1.11
HLA-DMB-260ENST00000477537 CRYGDP07320 174 aa8.11□□□□□ -1.11
HLA-DMB-260ENST00000477537 HTN1P15515 57 aa8.11□□□□□ -1.11
HLA-DMB-260ENST00000477537 POLR2KP53803 58 aaKnown RBP8.11□□□□□ -1.11
HLA-DMB-260ENST00000477537 ZNF876PQ49A33 203 aa8.11□□□□□ -1.11
HLA-DMB-260ENST00000477537 TMEM97Q5BJF2 176 aa8.11□□□□□ -1.11
HLA-DMB-260ENST00000477537 ZC2HC1BQ5TFG8 222 aa8.11□□□□□ -1.11
HLA-DMB-260ENST00000477537 DEFB104AQ8WTQ1 72 aa8.11□□□□□ -1.11
HLA-DMB-260ENST00000477537 H7C1H1 209 aa8.11□□□□□ -1.11
HLA-DMB-260ENST00000477537 VCYO14598 125 aa8.11□□□□□ -1.11
HLA-DMB-260ENST00000477537 CHTOPQ9Y3Y2 248 aaKnown RBP8.11□□□□□ -1.11
HLA-DMB-260ENST00000477537 SDHAF1A6NFY7 115 aa8.1□□□□□ -1.11
HLA-DMB-260ENST00000477537 F8VRH5 84 aa8.1□□□□□ -1.11
HLA-DMB-260ENST00000477537 TAX1BP3O14907 124 aa8.1□□□□□ -1.11
HLA-DMB-260ENST00000477537 PLNP26678 52 aa8.1□□□□□ -1.11
HLA-DMB-260ENST00000477537 NEXN-AS1Q8NBZ9 246 aa8.1□□□□□ -1.11
HLA-DMB-260ENST00000477537 TRBV6-5A0A0K0K1A5 114 aa8.09□□□□□ -1.11
HLA-DMB-260ENST00000477537 M0QY20 66 aa8.09□□□□□ -1.11
HLA-DMB-260ENST00000477537 CCL24O00175 119 aa8.09□□□□□ -1.11
HLA-DMB-260ENST00000477537 ZFP2Q6ZN57 461 aa8.09□□□□□ -1.11
HLA-DMB-260ENST00000477537 ERASQ7Z444 233 aa8.09□□□□□ -1.11
HLA-DMB-260ENST00000477537 BAALCQ8WXS3 180 aa8.09□□□□□ -1.11
HLA-DMB-260ENST00000477537 KIR2DL4Q99706 377 aa8.09□□□□□ -1.11
HLA-DMB-260ENST00000477537 SPAG8Q99932 426 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms