RNA–Protein interactions for RNA: ENST00000476241.2

HNRNPU-209, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-209ENST00000476241 HERVK_113P63121 156 aa12.5□□□□□ -0.41
HNRNPU-209ENST00000476241 RPL39LQ96EH5 51 aaKnown RBP12.5□□□□□ -0.41
HNRNPU-209ENST00000476241 CENPFP49454 3210 aa12.49□□□□□ -0.41
HNRNPU-209ENST00000476241 TRAV12-1A0A0B4J245 112 aa12.49□□□□□ -0.41
HNRNPU-209ENST00000476241 IGHV3-38A0A0C4DH36 116 aa12.49□□□□□ -0.41
HNRNPU-209ENST00000476241 IGHV4-59P01825 116 aa12.49□□□□□ -0.41
HNRNPU-209ENST00000476241 DEFB130BP0DP73 79 aa12.49□□□□□ -0.41
HNRNPU-209ENST00000476241 DEFB130AP0DP74 79 aa12.49□□□□□ -0.41
HNRNPU-209ENST00000476241 VWC2LB2RUY7 222 aa12.49□□□□□ -0.41
HNRNPU-209ENST00000476241 PRAC2D3DTV9 90 aa12.49□□□□□ -0.41
HNRNPU-209ENST00000476241 HIST2H2BCQ6DN03 193 aa12.49□□□□□ -0.41
HNRNPU-209ENST00000476241 C9orf47Q6ZRZ4 202 aa12.49□□□□□ -0.41
HNRNPU-209ENST00000476241 VPREB3Q9UKI3 123 aa12.49□□□□□ -0.41
HNRNPU-209ENST00000476241 UTF1Q5T230 341 aa12.48□□□□□ -0.41
HNRNPU-209ENST00000476241 NTN5Q8WTR8 489 aaPredicted RBP12.48□□□□□ -0.41
HNRNPU-209ENST00000476241 MTORP42345 2549 aa12.48□□□□□ -0.41
HNRNPU-209ENST00000476241 SPRY2O43597 315 aa12.48□□□□□ -0.41
HNRNPU-209ENST00000476241 SH2D6Q7Z4S9 175 aa12.48□□□□□ -0.41
HNRNPU-209ENST00000476241 CARD19Q96LW7 228 aa12.48□□□□□ -0.41
HNRNPU-209ENST00000476241 ODF1Q14990 250 aa12.47□□□□□ -0.41
HNRNPU-209ENST00000476241 GDF5OSQ5U4N7 250 aa12.47□□□□□ -0.41
HNRNPU-209ENST00000476241 LINC00322Q6ZN03 302 aaPredicted RBP12.47□□□□□ -0.41
HNRNPU-209ENST00000476241 FANCD2OSQ96PS1 177 aa12.47□□□□□ -0.41
HNRNPU-209ENST00000476241 TTTY13Q9BZ97 58 aa12.47□□□□□ -0.41
HNRNPU-209ENST00000476241 FN1P02751 2386 aaKnown RBP12.47□□□□□ -0.41
HNRNPU-209ENST00000476241 SOCS3O14543 225 aa12.47□□□□□ -0.41
HNRNPU-209ENST00000476241 ZFP2Q6ZN57 461 aa12.47□□□□□ -0.41
HNRNPU-209ENST00000476241 EDA2RQ9HAV5 297 aa12.46□□□□□ -0.41
HNRNPU-209ENST00000476241 PLXNB1O43157 2135 aa12.46□□□□□ -0.41
HNRNPU-209ENST00000476241 Q8N7P7 452 aa12.46□□□□□ -0.41
HNRNPU-209ENST00000476241 IFITM1P13164 125 aa12.46□□□□□ -0.42
HNRNPU-209ENST00000476241 SUMO4Q6EEV6 95 aa12.46□□□□□ -0.42
HNRNPU-209ENST00000476241 MED14OSP0DP75 135 aa12.45□□□□□ -0.42
HNRNPU-209ENST00000476241 TRAV13-2A0A0B4J235 113 aa12.45□□□□□ -0.42
HNRNPU-209ENST00000476241 C19orf84I3L1E1 186 aa12.45□□□□□ -0.42
HNRNPU-209ENST00000476241 PFN2P35080 140 aa12.45□□□□□ -0.42
HNRNPU-209ENST00000476241 C10orf142B7Z368 130 aa12.44□□□□□ -0.42
HNRNPU-209ENST00000476241 C1orf229Q6ZS94 237 aaPredicted RBP12.44□□□□□ -0.42
HNRNPU-209ENST00000476241 TP53TG3Q9ULZ0 132 aa12.44□□□□□ -0.42
HNRNPU-209ENST00000476241 PLA2G2AP14555 144 aa12.44□□□□□ -0.42
HNRNPU-209ENST00000476241 C9orf153Q5TBE3 101 aa12.44□□□□□ -0.42
HNRNPU-209ENST00000476241 AJUBAQ96IF1 538 aa12.44□□□□□ -0.42
HNRNPU-209ENST00000476241 E9PLD3 99 aa12.44□□□□□ -0.42
HNRNPU-209ENST00000476241 PRSS47A8MTI9 375 aa12.43□□□□□ -0.42
HNRNPU-209ENST00000476241 GAGE7O76087 117 aa12.43□□□□□ -0.42
HNRNPU-209ENST00000476241 GAGE12FP0CL80 117 aa12.43□□□□□ -0.42
HNRNPU-209ENST00000476241 GAGE12GP0CL81 117 aa12.43□□□□□ -0.42
HNRNPU-209ENST00000476241 GAGE12IP0CL82 117 aa12.43□□□□□ -0.42
HNRNPU-209ENST00000476241 WFDC2Q14508 124 aa12.43□□□□□ -0.42
HNRNPU-209ENST00000476241 C5orf56Q8N8D9 126 aa12.43□□□□□ -0.42
HNRNPU-209ENST00000476241 RNASE13Q5GAN3 156 aaKnown RBP12.43□□□□□ -0.42
HNRNPU-209ENST00000476241 MRAPQ8TCY5 172 aa12.43□□□□□ -0.42
HNRNPU-209ENST00000476241 TOMM6Q96B49 74 aa12.43□□□□□ -0.42
HNRNPU-209ENST00000476241 ZMAT4Q9H898 229 aa12.43□□□□□ -0.42
HNRNPU-209ENST00000476241 DSCAMO60469 2012 aa12.42□□□□□ -0.42
HNRNPU-209ENST00000476241 HOXD3P31249 432 aaPredicted RBP12.42□□□□□ -0.42
HNRNPU-209ENST00000476241 A0A0J9YXV3 536 aa12.42□□□□□ -0.42
HNRNPU-209ENST00000476241 SPAG8Q99932 426 aaPredicted RBP12.42□□□□□ -0.42
HNRNPU-209ENST00000476241 TIMM17AQ99595 171 aa12.42□□□□□ -0.42
HNRNPU-209ENST00000476241 A4D1N5 150 aa12.41□□□□□ -0.42
HNRNPU-209ENST00000476241 CFHR3Q02985 330 aa12.41□□□□□ -0.42
HNRNPU-209ENST00000476241 TEN1Q86WV5 123 aa12.41□□□□□ -0.42
HNRNPU-209ENST00000476241 WFDC11Q8NEX6 87 aa12.41□□□□□ -0.42
HNRNPU-209ENST00000476241 IGHG4P01861 327 aa12.41□□□□□ -0.42
HNRNPU-209ENST00000476241 LOXL1Q08397 574 aaPredicted RBP12.41□□□□□ -0.42
HNRNPU-209ENST00000476241 GAGE6Q13070 117 aa12.41□□□□□ -0.42
HNRNPU-209ENST00000476241 C15orf53Q8NAA6 179 aa12.41□□□□□ -0.42
HNRNPU-209ENST00000476241 GOLGB1Q14789 3259 aaKnown RBP12.41□□□□□ -0.42
HNRNPU-209ENST00000476241 IGHV4-38-2P0DP08 117 aa12.41□□□□□ -0.42
HNRNPU-209ENST00000476241 BLCAPP62952 87 aa12.41□□□□□ -0.42
HNRNPU-209ENST00000476241 ANKRD29Q8N6D5 301 aa12.41□□□□□ -0.42
HNRNPU-209ENST00000476241 BAALCQ8WXS3 180 aa12.4□□□□□ -0.42
HNRNPU-209ENST00000476241 K7EMT4 169 aa12.4□□□□□ -0.42
HNRNPU-209ENST00000476241 MUC22E2RYF6 1773 aaPredicted RBP12.4□□□□□ -0.42
HNRNPU-209ENST00000476241 LRRC75A-AS1Q8N1F1 130 aa12.39□□□□□ -0.43
HNRNPU-209ENST00000476241 Q9H8V8 135 aa12.39□□□□□ -0.43
HNRNPU-209ENST00000476241 U3KQE9 123 aa12.39□□□□□ -0.43
HNRNPU-209ENST00000476241 IGLC6P0CF74 106 aa12.38□□□□□ -0.43
HNRNPU-209ENST00000476241 RNF152Q8N8N0 203 aa12.38□□□□□ -0.43
HNRNPU-209ENST00000476241 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.38□□□□□ -0.43
HNRNPU-209ENST00000476241 IGKV2-29A2NJV5 120 aaPredicted RBP12.38□□□□□ -0.43
HNRNPU-209ENST00000476241 ZNF80P51504 273 aaPredicted RBP12.38□□□□□ -0.43
HNRNPU-209ENST00000476241 MUSTN1Q8IVN3 82 aa12.38□□□□□ -0.43
HNRNPU-209ENST00000476241 ZFP36P26651 326 aaKnown RBP12.37□□□□□ -0.43
HNRNPU-209ENST00000476241 HERV-K104P63124 156 aa12.37□□□□□ -0.43
HNRNPU-209ENST00000476241 G3V4G9 280 aa12.37□□□□□ -0.43
HNRNPU-209ENST00000476241 RPL39P62891 51 aaKnown RBP12.37□□□□□ -0.43
HNRNPU-209ENST00000476241 UBL5Q9BZL1 73 aa12.37□□□□□ -0.43
HNRNPU-209ENST00000476241 PKD1L2Q7Z442 2459 aa12.36□□□□□ -0.43
HNRNPU-209ENST00000476241 C11orf86A6NJI1 115 aa12.36□□□□□ -0.43
HNRNPU-209ENST00000476241 MYCNOSP40205 109 aa12.36□□□□□ -0.43
HNRNPU-209ENST00000476241 SIRPDQ9H106 197 aa12.36□□□□□ -0.43
HNRNPU-209ENST00000476241 NACAE9PAV3 2078 aa12.35□□□□□ -0.43
HNRNPU-209ENST00000476241 CCL24O00175 119 aa12.35□□□□□ -0.43
HNRNPU-209ENST00000476241 NXPH4O95158 308 aa12.35□□□□□ -0.43
HNRNPU-209ENST00000476241 ACYP1P07311 99 aa12.35□□□□□ -0.43
HNRNPU-209ENST00000476241 LINC01620Q4KN68 170 aa12.35□□□□□ -0.43
HNRNPU-209ENST00000476241 Q8N1Y9 231 aa12.35□□□□□ -0.43
HNRNPU-209ENST00000476241 SLC25A29Q8N8R3 303 aa12.35□□□□□ -0.43
HNRNPU-209ENST00000476241 GPHB5Q86YW7 130 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms