RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 BTF3P20290 206 aaKnown RBP13.13□□□□□ -0.31
VARS2-206ENST00000473916 S100A12P80511 92 aa13.13□□□□□ -0.31
VARS2-206ENST00000473916 FAM74A4Q5TZK3 123 aa13.13□□□□□ -0.31
VARS2-206ENST00000473916 TEX43Q6ZNM6 134 aa13.13□□□□□ -0.31
VARS2-206ENST00000473916 CLUHP3Q96NS8 147 aa13.13□□□□□ -0.31
VARS2-206ENST00000473916 IGHV3OR16-12A0A075B7B8 117 aa13.12□□□□□ -0.31
VARS2-206ENST00000473916 ZNF876PQ49A33 203 aa13.12□□□□□ -0.31
VARS2-206ENST00000473916 C1orf158Q8N1D5 194 aa13.12□□□□□ -0.31
VARS2-206ENST00000473916 LINC00469Q8N7U9 141 aa13.12□□□□□ -0.31
VARS2-206ENST00000473916 GIG44P09565 113 aaPredicted RBP13.12□□□□□ -0.31
VARS2-206ENST00000473916 RPL35AP18077 110 aaKnown RBP13.12□□□□□ -0.31
VARS2-206ENST00000473916 FBN1P35555 2871 aaKnown RBP13.11□□□□□ -0.31
VARS2-206ENST00000473916 H0Y8G0 127 aa13.11□□□□□ -0.31
VARS2-206ENST00000473916 AZU1P20160 251 aa13.11□□□□□ -0.31
VARS2-206ENST00000473916 TMEM70Q9BUB7 260 aa13.11□□□□□ -0.31
VARS2-206ENST00000473916 TCAPO15273 167 aa13.1□□□□□ -0.31
VARS2-206ENST00000473916 SMIM17P0DL12 118 aa13.1□□□□□ -0.31
VARS2-206ENST00000473916 SUMO4Q6EEV6 95 aa13.1□□□□□ -0.31
VARS2-206ENST00000473916 POM121L12Q8N7R1 296 aa13.1□□□□□ -0.31
VARS2-206ENST00000473916 Q8N8P6 123 aa13.1□□□□□ -0.31
VARS2-206ENST00000473916 C11orf72Q8NBR9 251 aa13.1□□□□□ -0.31
VARS2-206ENST00000473916 NXT2Q9NPJ8 142 aaKnown RBP13.1□□□□□ -0.31
VARS2-206ENST00000473916 LINC01546A6NGU7 62 aa13.1□□□□□ -0.31
VARS2-206ENST00000473916 SYS1-DBNDD2H3BUS1 97 aa13.1□□□□□ -0.31
VARS2-206ENST00000473916 CRYGDP07320 174 aa13.1□□□□□ -0.31
VARS2-206ENST00000473916 ZNF747Q9BV97 191 aa13.1□□□□□ -0.31
VARS2-206ENST00000473916 PKIAP61925 76 aa13.09□□□□□ -0.31
VARS2-206ENST00000473916 MAJINQ3KP22 176 aa13.09□□□□□ -0.31
VARS2-206ENST00000473916 DEFB125Q8N687 156 aa13.09□□□□□ -0.31
VARS2-206ENST00000473916 SYT8Q8NBV8 401 aa13.09□□□□□ -0.31
VARS2-206ENST00000473916 PAM16Q9Y3D7 125 aa13.09□□□□□ -0.31
VARS2-206ENST00000473916 F5H697 171 aa13.08□□□□□ -0.31
VARS2-206ENST00000473916 HBDP02042 147 aa13.08□□□□□ -0.31
VARS2-206ENST00000473916 TMEM208Q9BTX3 173 aa13.08□□□□□ -0.31
VARS2-206ENST00000473916 PRSS47A8MTI9 375 aa13.08□□□□□ -0.32
VARS2-206ENST00000473916 NEGR1Q7Z3B1 354 aa13.08□□□□□ -0.32
VARS2-206ENST00000473916 DEFB104AQ8WTQ1 72 aa13.08□□□□□ -0.32
VARS2-206ENST00000473916 PMCHL2Q9BQD1 86 aa13.08□□□□□ -0.32
VARS2-206ENST00000473916 SMIM2Q9BVW6 85 aa13.08□□□□□ -0.32
VARS2-206ENST00000473916 HSPB8Q9UJY1 196 aa13.08□□□□□ -0.32
VARS2-206ENST00000473916 SUMO2P61956 95 aaKnown RBP13.07□□□□□ -0.32
VARS2-206ENST00000473916 FAM110AQ9BQ89 295 aa13.07□□□□□ -0.32
VARS2-206ENST00000473916 IGHV3-73A0A0B4J1V6 119 aa13.06□□□□□ -0.32
VARS2-206ENST00000473916 ZNF415Q09FC8 603 aa13.06□□□□□ -0.32
VARS2-206ENST00000473916 ZNF56Q15929 161 aa13.06□□□□□ -0.32
VARS2-206ENST00000473916 KRTAP24-1Q3LI83 254 aa13.06□□□□□ -0.32
VARS2-206ENST00000473916 C20orf144Q9BQM9 153 aa13.06□□□□□ -0.32
VARS2-206ENST00000473916 CMC4P56277 68 aaPredicted RBP13.06□□□□□ -0.32
VARS2-206ENST00000473916 TMEM158Q8WZ71 300 aa13.06□□□□□ -0.32
VARS2-206ENST00000473916 C18orf15Q96N68 181 aa13.06□□□□□ -0.32
VARS2-206ENST00000473916 LINC00467Q9BRT7 94 aa13.06□□□□□ -0.32
VARS2-206ENST00000473916 MAP1LC3CQ9BXW4 147 aa13.06□□□□□ -0.32
VARS2-206ENST00000473916 NUTF2P61970 127 aaKnown RBP13.05□□□□□ -0.32
VARS2-206ENST00000473916 MORN3Q6PF18 240 aaPredicted RBP13.05□□□□□ -0.32
VARS2-206ENST00000473916 VAMP8Q9BV40 100 aa13.05□□□□□ -0.32
VARS2-206ENST00000473916 MRPL16Q9NX20 251 aaKnown RBP13.05□□□□□ -0.32
VARS2-206ENST00000473916 KIR2DL5BA0A0G2JN68 375 aa13.05□□□□□ -0.32
VARS2-206ENST00000473916 KIR2DL5BA0A0G2JPC4 375 aa13.05□□□□□ -0.32
VARS2-206ENST00000473916 TSTD3H0UI37 97 aa13.05□□□□□ -0.32
VARS2-206ENST00000473916 KIR2DL5AQ8N109 375 aa13.05□□□□□ -0.32
VARS2-206ENST00000473916 M0R2P5 195 aa13.04□□□□□ -0.32
VARS2-206ENST00000473916 FCER1GP30273 86 aa13.04□□□□□ -0.32
VARS2-206ENST00000473916 C20orf78Q9BR46 151 aa13.03□□□□□ -0.32
VARS2-206ENST00000473916 CSTL1Q9H114 145 aa13.03□□□□□ -0.32
VARS2-206ENST00000473916 LAGE3Q14657 143 aa13.03□□□□□ -0.32
VARS2-206ENST00000473916 C9orf66Q5T8R8 295 aa13.03□□□□□ -0.32
VARS2-206ENST00000473916 STAB1Q9NY15 2570 aa13.03□□□□□ -0.32
VARS2-206ENST00000473916 M0QY20 66 aa13.02□□□□□ -0.33
VARS2-206ENST00000473916 DDTP30046 118 aa13.01□□□□□ -0.33
VARS2-206ENST00000473916 RNASE8Q8TDE3 154 aaKnown RBP13.01□□□□□ -0.33
VARS2-206ENST00000473916 IFI27L1Q96BM0 104 aa13.01□□□□□ -0.33
VARS2-206ENST00000473916 P0DMU3 169 aa13.01□□□□□ -0.33
VARS2-206ENST00000473916 FAM231AP0DMU4 169 aa13.01□□□□□ -0.33
VARS2-206ENST00000473916 FAM231CP0DMU5 169 aa13.01□□□□□ -0.33
VARS2-206ENST00000473916 IGLL1P15814 213 aa13.01□□□□□ -0.33
VARS2-206ENST00000473916 SPATA45Q537H7 98 aa13.01□□□□□ -0.33
VARS2-206ENST00000473916 PET117Q6UWS5 81 aa13.01□□□□□ -0.33
VARS2-206ENST00000473916 CSNK1G2-AS1Q8NCQ2 148 aa13.01□□□□□ -0.33
VARS2-206ENST00000473916 ST20Q9HBF5 79 aa13.01□□□□□ -0.33
VARS2-206ENST00000473916 INSL3P51460 131 aa13□□□□□ -0.33
VARS2-206ENST00000473916 LINC01545Q5VT33 79 aa13□□□□□ -0.33
VARS2-206ENST00000473916 UFSP1Q6NVU6 142 aa13□□□□□ -0.33
VARS2-206ENST00000473916 Q6ZSN1 163 aa13□□□□□ -0.33
VARS2-206ENST00000473916 Q9UF83 564 aa13□□□□□ -0.33
VARS2-206ENST00000473916 CFAP126Q5VTH2 177 aa13□□□□□ -0.33
VARS2-206ENST00000473916 GTSCR1Q86UQ5 136 aa13□□□□□ -0.33
VARS2-206ENST00000473916 IL17DQ8TAD2 202 aa13□□□□□ -0.33
VARS2-206ENST00000473916 NUDT3O95989 172 aa12.99□□□□□ -0.33
VARS2-206ENST00000473916 POLR2KP53803 58 aaKnown RBP12.99□□□□□ -0.33
VARS2-206ENST00000473916 PRIMA1Q86XR5 153 aa12.99□□□□□ -0.33
VARS2-206ENST00000473916 hDV102S1A0JD36 115 aa12.98□□□□□ -0.33
VARS2-206ENST00000473916 ZNF705AQ6ZN79 300 aaPredicted RBP12.98□□□□□ -0.33
VARS2-206ENST00000473916 NBEAL2Q6ZNJ1 2754 aa12.98□□□□□ -0.33
VARS2-206ENST00000473916 SDHAF1A6NFY7 115 aa12.98□□□□□ -0.33
VARS2-206ENST00000473916 PPP1R17O96001 155 aa12.98□□□□□ -0.33
VARS2-206ENST00000473916 SPXQ9BT56 116 aa12.98□□□□□ -0.33
VARS2-206ENST00000473916 TRAV9-2A0A087WT02 112 aa12.97□□□□□ -0.33
VARS2-206ENST00000473916 C20orf202A1L168 122 aa12.97□□□□□ -0.33
VARS2-206ENST00000473916 GOLT1BQ9Y3E0 138 aa12.97□□□□□ -0.33
VARS2-206ENST00000473916 TRGV1A0A0A0MS02 117 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms