RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 GZMBP10144 247 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 HIST1H1EP10412 219 aaKnown RBP0.95□□□□□ -2.26
CCDC39-203ENST00000473854 MGST1P10620 155 aaKnown RBP0.95□□□□□ -2.26
CCDC39-203ENST00000473854 CD99P14209 185 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 COX6B1P14854 86 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 SLC25A16P16260 332 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 PSMB8P28062 276 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 SRP14P37108 136 aaKnown RBP0.95□□□□□ -2.26
CCDC39-203ENST00000473854 CEACAM3P40198 252 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 RPS10P46783 165 aaKnown RBP0.95□□□□□ -2.26
CCDC39-203ENST00000473854 GNG4P50150 75 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 CRIP1P50238 77 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 ZNF80P51504 273 aaPredicted RBP0.95□□□□□ -2.26
CCDC39-203ENST00000473854 AKR1D1P51857 326 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 SUB1P53999 127 aaKnown RBP eCLIP0.95□□□□□ -2.26
CCDC39-203ENST00000473854 ATP5IP56385 69 aaPredicted RBP0.95□□□□□ -2.26
CCDC39-203ENST00000473854 TPPP2P59282 170 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 TAS2R45P59539 299 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 KRTAP12-3P60328 96 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 SELENOTP62341 195 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 RANP62826 216 aaKnown RBP0.95□□□□□ -2.26
CCDC39-203ENST00000473854 BLCAPP62952 87 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 SLC35B1P78383 322 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 LOXL1Q08397 574 aaPredicted RBP0.95□□□□□ -2.26
CCDC39-203ENST00000473854 FABP9Q0Z7S8 132 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 SLAQ13239 276 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 RAB31Q13636 194 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 IQCJQ1A5X6 159 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 TMEM183BQ1AE95 376 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 TMEM241Q24JQ0 296 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 DEFB113Q30KQ7 82 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 DEFB112Q30KQ8 113 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 Q56UQ5 140 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 PYY3Q5JQD4 70 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 COA6Q5JTJ3 125 aaKnown RBP0.95□□□□□ -2.26
CCDC39-203ENST00000473854 IBA57Q5T440 356 aaKnown RBP0.95□□□□□ -2.26
CCDC39-203ENST00000473854 ETFRF1Q6IPR1 90 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 MRPL54Q6P161 138 aaKnown RBP0.95□□□□□ -2.26
CCDC39-203ENST00000473854 UNQ5815/PRO19632Q6UWF5 114 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 TOMM20LQ6UXN7 152 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 CLEC19AQ6UXS0 136 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 ZNF562Q6V9R5 426 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 Q6ZQT7 251 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 TMEM136Q6ZRR5 245 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 GOLT1AQ6ZVE7 132 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 FAM231DQ6ZW35 169 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 SPATA12Q7Z6I5 190 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 TMEM183AQ8IXX5 376 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 TMEM256Q8N2U0 113 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 RNF182Q8N6D2 247 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 Q8N976 141 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 TMEM75Q8N9X5 138 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 C5orf17Q8NAS9 161 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 GATD1Q8NB37 220 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 WFDC11Q8NEX6 87 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 NUP35Q8NFH5 326 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 OR1L6Q8NGR2 347 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 MYOZ3Q8TDC0 251 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 DLX4Q92988 240 aaPredicted RBP0.95□□□□□ -2.26
CCDC39-203ENST00000473854 C9orf85Q96MD7 179 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 RNF2Q99496 336 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 C12orf57Q99622 126 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 HIST1H2BLQ99880 126 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 TXNDC17Q9BRA2 123 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 NDUFAF3Q9BU61 184 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 ZNF702PQ9H963 129 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 BIN3Q9NQY0 253 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 OTORQ9NRC9 128 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 OSTCQ9NRP0 149 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 TMEM242Q9NWH2 141 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 IL36BQ9NZH7 164 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 ZNF492Q9P255 531 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 EPDR1Q9UM22 224 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 HIGD1AQ9Y241 93 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 KLF12Q9Y4X4 402 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 LY96Q9Y6Y9 160 aa0.95□□□□□ -2.26
CCDC39-203ENST00000473854 HERC1Q15751 4861 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 KIAA1109Q2LD37 5005 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 IGLV8-61A0A075B6I0 122 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 TRAV9-1A0A075B6T8 112 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 TMSB15BA0A087X1C1 80 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 A0A096LNJ9 63 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.94□□□□□ -2.26
CCDC39-203ENST00000473854 IGHV1-24A0A0C4DH33 117 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 IGHV7-4-1A0A0J9YVY3 117 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 TRBV7-9A0A0J9YWB2 115 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 IZUMO1RA6ND01 250 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 RBMY1BA6NDE4 496 aaKnown RBP0.94□□□□□ -2.26
CCDC39-203ENST00000473854 PGPA6NDG6 321 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 RBMY1EA6NEQ0 496 aaKnown RBP0.94□□□□□ -2.26
CCDC39-203ENST00000473854 HELTA6NFD8 242 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 FAM223BA6NKX1 122 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 ZNF705GA8MUZ8 300 aaPredicted RBP0.94□□□□□ -2.26
CCDC39-203ENST00000473854 HIGD1CA8MV81 97 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 LINC00587B1AMM8 73 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 B4DSR2 109 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 F6UB75 175 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 H3BUA1 57 aa0.94□□□□□ -2.26
CCDC39-203ENST00000473854 J3QLI3 93 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms