RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 CKS2P33552 79 aa5.31□□□□□ -1.56
EPHA4-210ENST00000463446 TCTAP57738 103 aa5.31□□□□□ -1.56
EPHA4-210ENST00000463446 RAB5BP61020 215 aa5.31□□□□□ -1.56
EPHA4-210ENST00000463446 SMAGPQ0VAQ4 97 aa5.31□□□□□ -1.56
EPHA4-210ENST00000463446 FAM104BQ5XKR9 115 aa5.31□□□□□ -1.56
EPHA4-210ENST00000463446 LINC00612Q8N6U2 182 aa5.31□□□□□ -1.56
EPHA4-210ENST00000463446 GATD1Q8NB37 220 aa5.31□□□□□ -1.56
EPHA4-210ENST00000463446 OR10AG1Q8NH19 301 aa5.31□□□□□ -1.56
EPHA4-210ENST00000463446 KRTAP4-6Q9BYQ5 205 aa5.31□□□□□ -1.56
EPHA4-210ENST00000463446 PRO0255Q9UI72 69 aa5.31□□□□□ -1.56
EPHA4-210ENST00000463446 HHLA3Q9XRX5 114 aa5.31□□□□□ -1.56
EPHA4-210ENST00000463446 TNFRSF18Q9Y5U5 241 aa5.31□□□□□ -1.56
EPHA4-210ENST00000463446 AGRNO00468 2067 aa5.31□□□□□ -1.56
EPHA4-210ENST00000463446 TRAV10A0A0B4J240 114 aa5.3□□□□□ -1.56
EPHA4-210ENST00000463446 A0A1B0GXF2 115 aa5.3□□□□□ -1.56
EPHA4-210ENST00000463446 GAGE12BA1L429 117 aa5.3□□□□□ -1.56
EPHA4-210ENST00000463446 K7EMI3 77 aa5.3□□□□□ -1.56
EPHA4-210ENST00000463446 GAGE7O76087 117 aa5.3□□□□□ -1.56
EPHA4-210ENST00000463446 GAGE12FP0CL80 117 aa5.3□□□□□ -1.56
EPHA4-210ENST00000463446 GAGE12GP0CL81 117 aa5.3□□□□□ -1.56
EPHA4-210ENST00000463446 GAGE12IP0CL82 117 aa5.3□□□□□ -1.56
EPHA4-210ENST00000463446 RAB5AP20339 215 aa5.3□□□□□ -1.56
EPHA4-210ENST00000463446 RPS10P46783 165 aaKnown RBP5.3□□□□□ -1.56
EPHA4-210ENST00000463446 FABP9Q0Z7S8 132 aa5.3□□□□□ -1.56
EPHA4-210ENST00000463446 CFAP126Q5VTH2 177 aa5.3□□□□□ -1.56
EPHA4-210ENST00000463446 MRPL54Q6P161 138 aaKnown RBP5.3□□□□□ -1.56
EPHA4-210ENST00000463446 TMEM88Q6PEY1 159 aa5.3□□□□□ -1.56
EPHA4-210ENST00000463446 ATRAIDQ6UW56 229 aa5.3□□□□□ -1.56
EPHA4-210ENST00000463446 Q6ZQT7 251 aa5.3□□□□□ -1.56
EPHA4-210ENST00000463446 TMEM136Q6ZRR5 245 aa5.3□□□□□ -1.56
EPHA4-210ENST00000463446 ZNF575Q86XF7 245 aa5.3□□□□□ -1.56
EPHA4-210ENST00000463446 ORMDL3Q8N138 153 aa5.3□□□□□ -1.56
EPHA4-210ENST00000463446 C14orf178Q8N769 122 aaPredicted RBP5.3□□□□□ -1.56
EPHA4-210ENST00000463446 C20orf78Q9BR46 151 aa5.3□□□□□ -1.56
EPHA4-210ENST00000463446 EDA2RQ9HAV5 297 aa5.3□□□□□ -1.56
EPHA4-210ENST00000463446 NIT2Q9NQR4 276 aa5.3□□□□□ -1.56
EPHA4-210ENST00000463446 DNHD1Q96M86 4753 aa5.3□□□□□ -1.56
EPHA4-210ENST00000463446 A0A0J9YWU9 116 aa5.29□□□□□ -1.56
EPHA4-210ENST00000463446 PLAC8L1A1L4L8 177 aa5.29□□□□□ -1.56
EPHA4-210ENST00000463446 COLCA2A8K830 154 aa5.29□□□□□ -1.56
EPHA4-210ENST00000463446 VCYO14598 125 aa5.29□□□□□ -1.56
EPHA4-210ENST00000463446 IGHV3-53P01767 116 aa5.29□□□□□ -1.56
EPHA4-210ENST00000463446 CRYGDP07320 174 aa5.29□□□□□ -1.56
EPHA4-210ENST00000463446 RAB4AP20338 218 aa5.29□□□□□ -1.56
EPHA4-210ENST00000463446 EVI2AP22794 236 aa5.29□□□□□ -1.56
EPHA4-210ENST00000463446 LORP23490 312 aaPredicted RBP5.29□□□□□ -1.56
EPHA4-210ENST00000463446 SSTP61278 116 aa5.29□□□□□ -1.56
EPHA4-210ENST00000463446 RPL36AP83881 106 aaKnown RBP5.29□□□□□ -1.56
EPHA4-210ENST00000463446 RHOHQ15669 191 aa5.29□□□□□ -1.56
EPHA4-210ENST00000463446 ZNF56Q15929 161 aa5.29□□□□□ -1.56
EPHA4-210ENST00000463446 FAM74A4Q5TZK3 123 aa5.29□□□□□ -1.56
EPHA4-210ENST00000463446 Q6ZTI0 123 aa5.29□□□□□ -1.56
EPHA4-210ENST00000463446 DAZ4Q86SG3 579 aaKnown RBP5.29□□□□□ -1.56
EPHA4-210ENST00000463446 POM121L12Q8N7R1 296 aa5.29□□□□□ -1.56
EPHA4-210ENST00000463446 RPL36ALQ969Q0 106 aaKnown RBP5.29□□□□□ -1.56
EPHA4-210ENST00000463446 DAZ3Q9NR90 486 aaKnown RBP5.29□□□□□ -1.56
EPHA4-210ENST00000463446 KLK5Q9Y337 293 aaPredicted RBP5.29□□□□□ -1.56
EPHA4-210ENST00000463446 VWFP04275 2813 aa5.28□□□□□ -1.56
EPHA4-210ENST00000463446 TGIF2-C20orf24A0A0A6YYL0 155 aa5.28□□□□□ -1.56
EPHA4-210ENST00000463446 C1orf196B1AJZ1 125 aa5.28□□□□□ -1.56
EPHA4-210ENST00000463446 PAX4O43316 350 aa5.28□□□□□ -1.56
EPHA4-210ENST00000463446 MGPP08493 103 aa5.28□□□□□ -1.56
EPHA4-210ENST00000463446 PKIAP61925 76 aa5.28□□□□□ -1.56
EPHA4-210ENST00000463446 MRPL23Q16540 153 aaKnown RBP5.28□□□□□ -1.56
EPHA4-210ENST00000463446 CBLN2Q8IUK8 224 aa5.28□□□□□ -1.56
EPHA4-210ENST00000463446 C15orf53Q8NAA6 179 aa5.28□□□□□ -1.56
EPHA4-210ENST00000463446 TMEM18Q96B42 140 aa5.28□□□□□ -1.56
EPHA4-210ENST00000463446 KIR2DL4Q99706 377 aa5.28□□□□□ -1.56
EPHA4-210ENST00000463446 MRPL18Q9H0U6 180 aaKnown RBP5.28□□□□□ -1.56
EPHA4-210ENST00000463446 ST20Q9HBF5 79 aa5.28□□□□□ -1.56
EPHA4-210ENST00000463446 NXT2Q9NPJ8 142 aaKnown RBP5.28□□□□□ -1.56
EPHA4-210ENST00000463446 MRPL16Q9NX20 251 aaKnown RBP5.28□□□□□ -1.56
EPHA4-210ENST00000463446 TRBV7-3A0A075B6L6 115 aa5.27□□□□□ -1.57
EPHA4-210ENST00000463446 TRAV26-1A0A087WT03 109 aa5.27□□□□□ -1.57
EPHA4-210ENST00000463446 DEFB131BA0A096LNP1 70 aa5.27□□□□□ -1.57
EPHA4-210ENST00000463446 NUPR2A6NF83 97 aa5.27□□□□□ -1.57
EPHA4-210ENST00000463446 PRSS47A8MTI9 375 aa5.27□□□□□ -1.57
EPHA4-210ENST00000463446 F5H768 121 aa5.27□□□□□ -1.57
EPHA4-210ENST00000463446 PRM2P04554 102 aa5.27□□□□□ -1.57
EPHA4-210ENST00000463446 RPL32P62910 135 aaKnown RBP5.27□□□□□ -1.57
EPHA4-210ENST00000463446 C12orf74Q32Q52 190 aa5.27□□□□□ -1.57
EPHA4-210ENST00000463446 OR10J3Q5JRS4 329 aa5.27□□□□□ -1.57
EPHA4-210ENST00000463446 PRSS3P2Q8NHM4 247 aa5.27□□□□□ -1.57
EPHA4-210ENST00000463446 MSRB1Q9NZV6 116 aa5.27□□□□□ -1.57
EPHA4-210ENST00000463446 A0A087WWL8 130 aa5.26□□□□□ -1.57
EPHA4-210ENST00000463446 MUC21A0A0G2JKD1 596 aa5.26□□□□□ -1.57
EPHA4-210ENST00000463446 TRBV6-5A0A0K0K1A5 114 aa5.26□□□□□ -1.57
EPHA4-210ENST00000463446 MUC21A0A140T8X8 626 aa5.26□□□□□ -1.57
EPHA4-210ENST00000463446 NCR2O95944 276 aa5.26□□□□□ -1.57
EPHA4-210ENST00000463446 GATA1P15976 413 aaPredicted RBP5.26□□□□□ -1.57
EPHA4-210ENST00000463446 PMCHP20382 165 aa5.26□□□□□ -1.57
EPHA4-210ENST00000463446 FHL2Q14192 279 aa5.26□□□□□ -1.57
EPHA4-210ENST00000463446 UFSP1Q6NVU6 142 aa5.26□□□□□ -1.57
EPHA4-210ENST00000463446 AMN1Q8IY45 258 aa5.26□□□□□ -1.57
EPHA4-210ENST00000463446 PRELID3AQ96N28 172 aa5.26□□□□□ -1.57
EPHA4-210ENST00000463446 YPEL4Q96NS1 127 aa5.26□□□□□ -1.57
EPHA4-210ENST00000463446 MAP1LC3AQ9H492 121 aa5.26□□□□□ -1.57
EPHA4-210ENST00000463446 KIF25-AS1Q9Y6Z4 181 aa5.26□□□□□ -1.57
EPHA4-210ENST00000463446 I3L3M4 83 aa5.25□□□□□ -1.57
EPHA4-210ENST00000463446 K7EQD1 137 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms