RNA–Protein interactions for RNA: ENST00000444118.5

CCDC197-202, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-202ENST00000444118 CCL24O00175 119 aa12.77□□□□□ -0.37
CCDC197-202ENST00000444118 IGKV3-20P01619 116 aa12.77□□□□□ -0.37
CCDC197-202ENST00000444118 HNRNPA3P51991 378 aaKnown RBP12.77□□□□□ -0.37
CCDC197-202ENST00000444118 CITED2Q99967 270 aaPredicted RBP12.77□□□□□ -0.37
CCDC197-202ENST00000444118 TRAV12-2A0A075B6T6 113 aa12.76□□□□□ -0.37
CCDC197-202ENST00000444118 TRAV9-2A0A087WT02 112 aa12.76□□□□□ -0.37
CCDC197-202ENST00000444118 NDUFA7O95182 113 aa12.76□□□□□ -0.37
CCDC197-202ENST00000444118 IGLC3P0DOY3 106 aa12.76□□□□□ -0.37
CCDC197-202ENST00000444118 DEFB131AP59861 70 aa12.76□□□□□ -0.37
CCDC197-202ENST00000444118 LINC01545Q5VT33 79 aa12.76□□□□□ -0.37
CCDC197-202ENST00000444118 ATOH7Q8N100 152 aa12.76□□□□□ -0.37
CCDC197-202ENST00000444118 POM121L12Q8N7R1 296 aa12.76□□□□□ -0.37
CCDC197-202ENST00000444118 Q8N8P6 123 aa12.76□□□□□ -0.37
CCDC197-202ENST00000444118 SMR3AQ99954 134 aa12.76□□□□□ -0.37
CCDC197-202ENST00000444118 TRAV26-2A0A0B4J265 109 aa12.76□□□□□ -0.37
CCDC197-202ENST00000444118 OR4C46A6NHA9 309 aa12.76□□□□□ -0.37
CCDC197-202ENST00000444118 SPRY2O43597 315 aa12.76□□□□□ -0.37
CCDC197-202ENST00000444118 CD7P09564 240 aa12.76□□□□□ -0.37
CCDC197-202ENST00000444118 C11orf44Q8N8P7 122 aa12.76□□□□□ -0.37
CCDC197-202ENST00000444118 C9orf85Q96MD7 179 aa12.76□□□□□ -0.37
CCDC197-202ENST00000444118 SPAG8Q99932 426 aaPredicted RBP12.76□□□□□ -0.37
CCDC197-202ENST00000444118 NSD1Q96L73 2696 aaPredicted RBP12.75□□□□□ -0.37
CCDC197-202ENST00000444118 TRAV25A0A0B4J276 109 aa12.75□□□□□ -0.37
CCDC197-202ENST00000444118 IGHV3-16A0A0C4DH30 117 aa12.75□□□□□ -0.37
CCDC197-202ENST00000444118 H3BMM0 161 aa12.75□□□□□ -0.37
CCDC197-202ENST00000444118 CD300EQ496F6 205 aaPredicted RBP12.75□□□□□ -0.37
CCDC197-202ENST00000444118 MAP6D1Q9H9H5 199 aa12.75□□□□□ -0.37
CCDC197-202ENST00000444118 ZNF256Q9Y2P7 627 aaPredicted RBP12.75□□□□□ -0.37
CCDC197-202ENST00000444118 KIF25-AS1Q9Y6Z4 181 aa12.74□□□□□ -0.37
CCDC197-202ENST00000444118 IGHV1OR15-1A0A075B7D0 117 aa12.74□□□□□ -0.37
CCDC197-202ENST00000444118 A0A1W2PRX2 142 aa12.74□□□□□ -0.37
CCDC197-202ENST00000444118 KNCNA6PVL3 124 aa12.74□□□□□ -0.37
CCDC197-202ENST00000444118 C14orf178Q8N769 122 aaPredicted RBP12.74□□□□□ -0.37
CCDC197-202ENST00000444118 LY6G6DO95868 133 aa12.73□□□□□ -0.37
CCDC197-202ENST00000444118 Q8N1Y9 231 aa12.73□□□□□ -0.37
CCDC197-202ENST00000444118 JMJD8Q96S16 334 aa12.73□□□□□ -0.37
CCDC197-202ENST00000444118 FCER1GP30273 86 aa12.72□□□□□ -0.37
CCDC197-202ENST00000444118 LINC00315P59091 139 aa12.72□□□□□ -0.37
CCDC197-202ENST00000444118 RBMY1BA6NDE4 496 aaKnown RBP12.72□□□□□ -0.37
CCDC197-202ENST00000444118 RBMY1EA6NEQ0 496 aaKnown RBP12.72□□□□□ -0.37
CCDC197-202ENST00000444118 RBMY1DP0C7P1 496 aaKnown RBP12.72□□□□□ -0.37
CCDC197-202ENST00000444118 PROK1P58294 105 aa12.72□□□□□ -0.37
CCDC197-202ENST00000444118 Q6ZN92 141 aa12.72□□□□□ -0.37
CCDC197-202ENST00000444118 RASL10AQ92737 203 aa12.72□□□□□ -0.37
CCDC197-202ENST00000444118 TEP1Q99973 2627 aaKnown RBP12.71□□□□□ -0.37
CCDC197-202ENST00000444118 IGLL1P15814 213 aa12.71□□□□□ -0.37
CCDC197-202ENST00000444118 FXYD7P58549 80 aa12.71□□□□□ -0.37
CCDC197-202ENST00000444118 C20orf78Q9BR46 151 aa12.71□□□□□ -0.37
CCDC197-202ENST00000444118 SMIM2Q9BVW6 85 aa12.71□□□□□ -0.37
CCDC197-202ENST00000444118 RBMY1A1P0DJD3 496 aaKnown RBP12.7□□□□□ -0.38
CCDC197-202ENST00000444118 RBMY1CP0DJD4 496 aa12.7□□□□□ -0.38
CCDC197-202ENST00000444118 RBMY1FQ15415 496 aaKnown RBP12.7□□□□□ -0.38
CCDC197-202ENST00000444118 CLUHP3Q96NS8 147 aa12.7□□□□□ -0.38
CCDC197-202ENST00000444118 MDFICQ9P1T7 246 aa12.7□□□□□ -0.38
CCDC197-202ENST00000444118 SUMO2P61956 95 aaKnown RBP12.7□□□□□ -0.38
CCDC197-202ENST00000444118 LGALS9BQ3B8N2 356 aa12.7□□□□□ -0.38
CCDC197-202ENST00000444118 LGALS9CQ6DKI2 356 aa12.7□□□□□ -0.38
CCDC197-202ENST00000444118 IFI27L1Q96BM0 104 aa12.7□□□□□ -0.38
CCDC197-202ENST00000444118 TRGV11A0A075B6L2 103 aa12.69□□□□□ -0.38
CCDC197-202ENST00000444118 A0A1B0GV72 72 aa12.69□□□□□ -0.38
CCDC197-202ENST00000444118 ADARB2-AS1A8MUL3 147 aa12.69□□□□□ -0.38
CCDC197-202ENST00000444118 PPP1R17O96001 155 aa12.69□□□□□ -0.38
CCDC197-202ENST00000444118 ST20Q9HBF5 79 aa12.69□□□□□ -0.38
CCDC197-202ENST00000444118 K7EMI3 77 aa12.68□□□□□ -0.38
CCDC197-202ENST00000444118 MGPP08493 103 aa12.68□□□□□ -0.38
CCDC197-202ENST00000444118 LAGE3Q14657 143 aa12.68□□□□□ -0.38
CCDC197-202ENST00000444118 VAMP3Q15836 100 aa12.68□□□□□ -0.38
CCDC197-202ENST00000444118 ODF3L2Q3SX64 289 aa12.68□□□□□ -0.38
CCDC197-202ENST00000444118 H0Y8G0 127 aa12.68□□□□□ -0.38
CCDC197-202ENST00000444118 SYT8Q8NBV8 401 aa12.68□□□□□ -0.38
CCDC197-202ENST00000444118 TMEM158Q8WZ71 300 aa12.68□□□□□ -0.38
CCDC197-202ENST00000444118 MCRIP2Q9BUT9 160 aaKnown RBP12.68□□□□□ -0.38
CCDC197-202ENST00000444118 SMIM17P0DL12 118 aa12.67□□□□□ -0.38
CCDC197-202ENST00000444118 RPL39LQ96EH5 51 aaKnown RBP12.67□□□□□ -0.38
CCDC197-202ENST00000444118 JPT2Q9H910 190 aa12.66□□□□□ -0.38
CCDC197-202ENST00000444118 NIPBLQ6KC79 2804 aaeCLIP12.66□□□□□ -0.38
CCDC197-202ENST00000444118 hDV102S1A0JD36 115 aa12.66□□□□□ -0.38
CCDC197-202ENST00000444118 RPL32P62910 135 aaKnown RBP12.66□□□□□ -0.38
CCDC197-202ENST00000444118 PMCHL2Q9BQD1 86 aa12.66□□□□□ -0.38
CCDC197-202ENST00000444118 C2CD3Q4AC94 2353 aa12.65□□□□□ -0.38
CCDC197-202ENST00000444118 LINC00467Q9BRT7 94 aa12.65□□□□□ -0.38
CCDC197-202ENST00000444118 NACAE9PAV3 2078 aa12.64□□□□□ -0.39
CCDC197-202ENST00000444118 SUMO4Q6EEV6 95 aa12.64□□□□□ -0.39
CCDC197-202ENST00000444118 JMJD1CQ15652 2540 aa12.64□□□□□ -0.39
CCDC197-202ENST00000444118 ORMDL2Q53FV1 153 aa12.64□□□□□ -0.39
CCDC197-202ENST00000444118 FN1P02751 2386 aaKnown RBP12.64□□□□□ -0.39
CCDC197-202ENST00000444118 A0A087WWL8 130 aa12.63□□□□□ -0.39
CCDC197-202ENST00000444118 CRYGDP07320 174 aa12.63□□□□□ -0.39
CCDC197-202ENST00000444118 C18orf15Q96N68 181 aa12.63□□□□□ -0.39
CCDC197-202ENST00000444118 ATP5LO75964 103 aa12.62□□□□□ -0.39
CCDC197-202ENST00000444118 HINT1P49773 126 aaPredicted RBP12.62□□□□□ -0.39
CCDC197-202ENST00000444118 OR11H12B2RN74 326 aa12.62□□□□□ -0.39
CCDC197-202ENST00000444118 IGLV1-51P01701 117 aa12.62□□□□□ -0.39
CCDC197-202ENST00000444118 ZNF876PQ49A33 203 aa12.62□□□□□ -0.39
CCDC197-202ENST00000444118 PIK3CD-AS1Q5SR53 167 aa12.62□□□□□ -0.39
CCDC197-202ENST00000444118 TRBV6-5A0A0K0K1A5 114 aa12.61□□□□□ -0.39
CCDC197-202ENST00000444118 INSP01308 110 aa12.61□□□□□ -0.39
CCDC197-202ENST00000444118 FAM110AQ9BQ89 295 aa12.61□□□□□ -0.39
CCDC197-202ENST00000444118 INAFM1C9JVW0 142 aa12.6□□□□□ -0.39
CCDC197-202ENST00000444118 POLR2KP53803 58 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms