RNA–Protein interactions for RNA: ENST00000400564.5

SAMSN1-202, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-202ENST00000400564 FLG2Q5D862 2391 aaPredicted RBP1.38□□□□□ -2.19
SAMSN1-202ENST00000400564 PTPRMP28827 1452 aa1.38□□□□□ -2.19
SAMSN1-202ENST00000400564 SMG6Q86US8 1419 aaKnown RBP1.38□□□□□ -2.19
SAMSN1-202ENST00000400564 TRAV12-3A0A0B4J271 114 aa1.37□□□□□ -2.19
SAMSN1-202ENST00000400564 SPAARA0A1B0GVQ0 90 aa1.37□□□□□ -2.19
SAMSN1-202ENST00000400564 SNAPC5O75971 98 aa1.37□□□□□ -2.19
SAMSN1-202ENST00000400564 IFNGP01579 166 aa1.37□□□□□ -2.19
SAMSN1-202ENST00000400564 ARL14EPLP0DKL9 152 aa1.37□□□□□ -2.19
SAMSN1-202ENST00000400564 C9orf116Q5BN46 136 aaPredicted RBP1.37□□□□□ -2.19
SAMSN1-202ENST00000400564 C5orf56Q8N8D9 126 aa1.37□□□□□ -2.19
SAMSN1-202ENST00000400564 SCN3BQ9NY72 215 aa1.37□□□□□ -2.19
SAMSN1-202ENST00000400564 ABCA4P78363 2273 aa1.37□□□□□ -2.19
SAMSN1-202ENST00000400564 TEX49A0A1B0GTD5 131 aa1.36□□□□□ -2.19
SAMSN1-202ENST00000400564 F6UZH7 168 aa1.36□□□□□ -2.19
SAMSN1-202ENST00000400564 BTG2P78543 158 aa1.36□□□□□ -2.19
SAMSN1-202ENST00000400564 WHAMMP3Q1A5X7 153 aa1.36□□□□□ -2.19
SAMSN1-202ENST00000400564 Q6ZS92 163 aa1.36□□□□□ -2.19
SAMSN1-202ENST00000400564 DEFB132Q7Z7B7 95 aa1.36□□□□□ -2.19
SAMSN1-202ENST00000400564 SPTSSBQ8NFR3 76 aa1.36□□□□□ -2.19
SAMSN1-202ENST00000400564 PP6455Q8WZ26 134 aa1.36□□□□□ -2.19
SAMSN1-202ENST00000400564 CGREF1Q99674 301 aa1.36□□□□□ -2.19
SAMSN1-202ENST00000400564 SERP1Q9Y6X1 66 aa1.36□□□□□ -2.19
SAMSN1-202ENST00000400564 ASCC3Q8N3C0 2202 aaKnown RBP1.36□□□□□ -2.19
SAMSN1-202ENST00000400564 NALCNQ8IZF0 1738 aa1.36□□□□□ -2.19
SAMSN1-202ENST00000400564 FBN3Q75N90 2809 aa1.36□□□□□ -2.19
SAMSN1-202ENST00000400564 CFTRP13569 1480 aa1.35□□□□□ -2.19
SAMSN1-202ENST00000400564 BCL9LQ86UU0 1499 aa1.35□□□□□ -2.19
SAMSN1-202ENST00000400564 MIF4GDA9UHW6 222 aaKnown RBP1.35□□□□□ -2.19
SAMSN1-202ENST00000400564 MCRIP1C9JLW8 97 aa1.35□□□□□ -2.19
SAMSN1-202ENST00000400564 S100A1P23297 94 aa1.35□□□□□ -2.19
SAMSN1-202ENST00000400564 CBLN1P23435 193 aa1.35□□□□□ -2.19
SAMSN1-202ENST00000400564 NPC2P61916 151 aa1.35□□□□□ -2.19
SAMSN1-202ENST00000400564 ZNF56Q15929 161 aa1.35□□□□□ -2.19
SAMSN1-202ENST00000400564 C10orf82Q8WW14 230 aa1.35□□□□□ -2.19
SAMSN1-202ENST00000400564 LSM10Q969L4 123 aaKnown RBP1.35□□□□□ -2.19
SAMSN1-202ENST00000400564 SPAG17Q6Q759 2223 aa1.35□□□□□ -2.19
SAMSN1-202ENST00000400564 A0A1W2PPM0 123 aa1.34□□□□□ -2.19
SAMSN1-202ENST00000400564 Q56UQ5 140 aa1.34□□□□□ -2.19
SAMSN1-202ENST00000400564 RREB1Q92766 1687 aa1.34□□□□□ -2.19
SAMSN1-202ENST00000400564 ZNF518AQ6AHZ1 1483 aa1.34□□□□□ -2.2
SAMSN1-202ENST00000400564 DAPK1P53355 1430 aa1.34□□□□□ -2.2
SAMSN1-202ENST00000400564 CORTO00230 105 aa1.34□□□□□ -2.2
SAMSN1-202ENST00000400564 IFNA17P01571 189 aa1.34□□□□□ -2.2
SAMSN1-202ENST00000400564 MRPS10P82664 201 aaKnown RBP1.34□□□□□ -2.2
SAMSN1-202ENST00000400564 Q6AWC8 147 aa1.34□□□□□ -2.2
SAMSN1-202ENST00000400564 PPP1R1CQ8WVI7 109 aa1.34□□□□□ -2.2
SAMSN1-202ENST00000400564 COA4Q9NYJ1 87 aa1.34□□□□□ -2.2
SAMSN1-202ENST00000400564 DLEC1Q9Y238 1755 aa1.33□□□□□ -2.2
SAMSN1-202ENST00000400564 ESPL1Q14674 2120 aa1.33□□□□□ -2.2
SAMSN1-202ENST00000400564 PIGBOS1A0A0B4J2F0 54 aa1.33□□□□□ -2.2
SAMSN1-202ENST00000400564 APOC4-APOC2K7ER74 178 aa1.33□□□□□ -2.2
SAMSN1-202ENST00000400564 APOC2P02655 101 aa1.33□□□□□ -2.2
SAMSN1-202ENST00000400564 KRTAP10-4P60372 401 aaPredicted RBP1.33□□□□□ -2.2
SAMSN1-202ENST00000400564 RBM3P98179 157 aaKnown RBP1.33□□□□□ -2.2
SAMSN1-202ENST00000400564 EIF4G3O43432 1585 aaKnown RBP1.32□□□□□ -2.2
SAMSN1-202ENST00000400564 S100PP25815 95 aa1.32□□□□□ -2.2
SAMSN1-202ENST00000400564 TPPP2P59282 170 aa1.32□□□□□ -2.2
SAMSN1-202ENST00000400564 CATR1Q13166 79 aa1.32□□□□□ -2.2
SAMSN1-202ENST00000400564 C12orf73Q69YU5 71 aa1.32□□□□□ -2.2
SAMSN1-202ENST00000400564 MRPL54Q6P161 138 aaKnown RBP1.32□□□□□ -2.2
SAMSN1-202ENST00000400564 C20orf197Q8N268 126 aa1.32□□□□□ -2.2
SAMSN1-202ENST00000400564 BET1LQ9NYM9 111 aa1.32□□□□□ -2.2
SAMSN1-202ENST00000400564 MED12Q93074 2177 aa1.32□□□□□ -2.2
SAMSN1-202ENST00000400564 BLMP54132 1417 aaPredicted RBP1.31□□□□□ -2.2
SAMSN1-202ENST00000400564 COL6A6A6NMZ7 2263 aa1.31□□□□□ -2.2
SAMSN1-202ENST00000400564 GNG4P50150 75 aa1.31□□□□□ -2.2
SAMSN1-202ENST00000400564 KLKP1Q107X0 134 aa1.31□□□□□ -2.2
SAMSN1-202ENST00000400564 Q8N6K4 173 aa1.31□□□□□ -2.2
SAMSN1-202ENST00000400564 RIMS1Q86UR5 1692 aaKnown RBP1.31□□□□□ -2.2
SAMSN1-202ENST00000400564 MUC22E2RYF6 1773 aaPredicted RBP1.31□□□□□ -2.2
SAMSN1-202ENST00000400564 AFDNP55196 1824 aaKnown RBP1.3□□□□□ -2.2
SAMSN1-202ENST00000400564 KTN1Q86UP2 1357 aaKnown RBP1.3□□□□□ -2.2
SAMSN1-202ENST00000400564 TRBV10-3A0A0K0K1G6 114 aa1.3□□□□□ -2.2
SAMSN1-202ENST00000400564 INSL4Q14641 139 aa1.3□□□□□ -2.2
SAMSN1-202ENST00000400564 PPP3R1P63098 170 aa1.29□□□□□ -2.2
SAMSN1-202ENST00000400564 C9orf153Q5TBE3 101 aa1.29□□□□□ -2.2
SAMSN1-202ENST00000400564 C10orf99Q6UWK7 81 aa1.29□□□□□ -2.2
SAMSN1-202ENST00000400564 C4orf33Q8N1A6 199 aa1.29□□□□□ -2.2
SAMSN1-202ENST00000400564 Q8N8P6 123 aa1.29□□□□□ -2.2
SAMSN1-202ENST00000400564 PLAC4Q8WY50 150 aa1.29□□□□□ -2.2
SAMSN1-202ENST00000400564 PPP3R2Q96LZ3 170 aa1.29□□□□□ -2.2
SAMSN1-202ENST00000400564 TMEM14BQ9NUH8 114 aa1.29□□□□□ -2.2
SAMSN1-202ENST00000400564 RBBP6Q7Z6E9 1792 aaKnown RBP1.29□□□□□ -2.2
SAMSN1-202ENST00000400564 C20orf202A1L168 122 aa1.28□□□□□ -2.2
SAMSN1-202ENST00000400564 RBAKDNA6NC62 111 aa1.28□□□□□ -2.2
SAMSN1-202ENST00000400564 TNFP01375 233 aa1.28□□□□□ -2.2
SAMSN1-202ENST00000400564 CCL3L1P16619 93 aa1.28□□□□□ -2.2
SAMSN1-202ENST00000400564 UBE2D1P51668 147 aa1.28□□□□□ -2.2
SAMSN1-202ENST00000400564 ELOF1P60002 83 aaKnown RBP1.28□□□□□ -2.2
SAMSN1-202ENST00000400564 SSBP1Q04837 148 aaKnown RBP1.28□□□□□ -2.2
SAMSN1-202ENST00000400564 FAM74A4Q5TZK3 123 aa1.28□□□□□ -2.2
SAMSN1-202ENST00000400564 COX7B2Q8TF08 81 aa1.28□□□□□ -2.2
SAMSN1-202ENST00000400564 LAMB1P07942 1786 aa1.28□□□□□ -2.2
SAMSN1-202ENST00000400564 ZNF142P52746 1687 aaPredicted RBP1.28□□□□□ -2.2
SAMSN1-202ENST00000400564 A2ML1A8K2U0 1454 aa1.27□□□□□ -2.21
SAMSN1-202ENST00000400564 MYOM2P54296 1465 aa1.27□□□□□ -2.21
SAMSN1-202ENST00000400564 FAM135AQ9P2D6 1515 aa1.27□□□□□ -2.21
SAMSN1-202ENST00000400564 TENM1Q9UKZ4 2725 aa1.27□□□□□ -2.21
SAMSN1-202ENST00000400564 LY6G6CO95867 125 aa1.27□□□□□ -2.21
SAMSN1-202ENST00000400564 SPINT3P49223 89 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 228.8 ms