RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 SMIM6P0DI80 62 aa6.29□□□□□ -1.4
TDP1-203ENST00000393454 MRAP2Q96G30 205 aa6.29□□□□□ -1.4
TDP1-203ENST00000393454 LINC00467Q9BRT7 94 aa6.29□□□□□ -1.4
TDP1-203ENST00000393454 GIG44P09565 113 aaPredicted RBP6.29□□□□□ -1.4
TDP1-203ENST00000393454 AZU1P20160 251 aa6.29□□□□□ -1.4
TDP1-203ENST00000393454 PYY3Q5JQD4 70 aa6.29□□□□□ -1.4
TDP1-203ENST00000393454 LAMTOR2Q9Y2Q5 125 aa6.29□□□□□ -1.4
TDP1-203ENST00000393454 M0R2P5 195 aa6.28□□□□□ -1.4
TDP1-203ENST00000393454 Q6ZWC4 215 aa6.28□□□□□ -1.4
TDP1-203ENST00000393454 CSTL1Q9H114 145 aa6.28□□□□□ -1.4
TDP1-203ENST00000393454 AP5S1Q9NUS5 200 aa6.28□□□□□ -1.4
TDP1-203ENST00000393454 IGHV1-24A0A0C4DH33 117 aa6.27□□□□□ -1.41
TDP1-203ENST00000393454 SCGB1D1O95968 90 aa6.27□□□□□ -1.41
TDP1-203ENST00000393454 KRTDAPP60985 99 aa6.27□□□□□ -1.41
TDP1-203ENST00000393454 ZNF56Q15929 161 aa6.27□□□□□ -1.41
TDP1-203ENST00000393454 NRACQ8N912 160 aa6.27□□□□□ -1.41
TDP1-203ENST00000393454 C11orf72Q8NBR9 251 aa6.27□□□□□ -1.41
TDP1-203ENST00000393454 SPXQ9BT56 116 aa6.27□□□□□ -1.41
TDP1-203ENST00000393454 KIF25-AS1Q9Y6Z4 181 aa6.27□□□□□ -1.41
TDP1-203ENST00000393454 LINC00315P59091 139 aa6.27□□□□□ -1.41
TDP1-203ENST00000393454 SUMO4Q6EEV6 95 aa6.27□□□□□ -1.41
TDP1-203ENST00000393454 RPL39LQ96EH5 51 aaKnown RBP6.27□□□□□ -1.41
TDP1-203ENST00000393454 MRPL16Q9NX20 251 aaKnown RBP6.27□□□□□ -1.41
TDP1-203ENST00000393454 COL6A5A8TX70 2615 aa6.26□□□□□ -1.41
TDP1-203ENST00000393454 IGHV3-73A0A0B4J1V6 119 aa6.26□□□□□ -1.41
TDP1-203ENST00000393454 CRYGDP07320 174 aa6.26□□□□□ -1.41
TDP1-203ENST00000393454 JOSD1Q15040 202 aaPredicted RBP6.26□□□□□ -1.41
TDP1-203ENST00000393454 OXLD1Q5BKU9 147 aa6.26□□□□□ -1.41
TDP1-203ENST00000393454 CSNK1G2-AS1Q8NCQ2 148 aa6.26□□□□□ -1.41
TDP1-203ENST00000393454 RASL10AQ92737 203 aa6.26□□□□□ -1.41
TDP1-203ENST00000393454 NXT2Q9NPJ8 142 aaKnown RBP6.26□□□□□ -1.41
TDP1-203ENST00000393454 NIT2Q9NQR4 276 aa6.26□□□□□ -1.41
TDP1-203ENST00000393454 TRRAPQ9Y4A5 3859 aa6.26□□□□□ -1.41
TDP1-203ENST00000393454 LEPROTL1O95214 131 aa6.26□□□□□ -1.41
TDP1-203ENST00000393454 PPP1R17O96001 155 aa6.26□□□□□ -1.41
TDP1-203ENST00000393454 RRN3P1Q2M238 152 aa6.26□□□□□ -1.41
TDP1-203ENST00000393454 POM121L12Q8N7R1 296 aa6.26□□□□□ -1.41
TDP1-203ENST00000393454 Q8N8P6 123 aa6.26□□□□□ -1.41
TDP1-203ENST00000393454 TMEM263Q8WUH6 116 aaKnown RBP6.26□□□□□ -1.41
TDP1-203ENST00000393454 TRGV1A0A0A0MS02 117 aa6.25□□□□□ -1.41
TDP1-203ENST00000393454 A8MWV9 139 aa6.25□□□□□ -1.41
TDP1-203ENST00000393454 WIPF1O43516 503 aa6.25□□□□□ -1.41
TDP1-203ENST00000393454 SUMO2P61956 95 aaKnown RBP6.25□□□□□ -1.41
TDP1-203ENST00000393454 CDPF1Q6NVV7 123 aa6.25□□□□□ -1.41
TDP1-203ENST00000393454 RNASE8Q8TDE3 154 aaKnown RBP6.25□□□□□ -1.41
TDP1-203ENST00000393454 PTH2Q96A98 100 aa6.24□□□□□ -1.41
TDP1-203ENST00000393454 C16orf74Q96GX8 76 aa6.24□□□□□ -1.41
TDP1-203ENST00000393454 C20orf78Q9BR46 151 aa6.24□□□□□ -1.41
TDP1-203ENST00000393454 ST20Q9HBF5 79 aa6.24□□□□□ -1.41
TDP1-203ENST00000393454 NOP10Q9NPE3 64 aaKnown RBP6.24□□□□□ -1.41
TDP1-203ENST00000393454 PRSS47A8MTI9 375 aa6.24□□□□□ -1.41
TDP1-203ENST00000393454 TCAPO15273 167 aa6.24□□□□□ -1.41
TDP1-203ENST00000393454 C3orf79P0CE67 100 aa6.24□□□□□ -1.41
TDP1-203ENST00000393454 APOC4P55056 127 aa6.24□□□□□ -1.41
TDP1-203ENST00000393454 PIK3CD-AS1Q5SR53 167 aa6.24□□□□□ -1.41
TDP1-203ENST00000393454 CFAP126Q5VTH2 177 aa6.24□□□□□ -1.41
TDP1-203ENST00000393454 ZNF705AQ6ZN79 300 aaPredicted RBP6.24□□□□□ -1.41
TDP1-203ENST00000393454 LINC00173Q6ZV60 143 aa6.24□□□□□ -1.41
TDP1-203ENST00000393454 SMIM2Q9BVW6 85 aa6.24□□□□□ -1.41
TDP1-203ENST00000393454 IGLV2-18A0A075B6J9 118 aa6.23□□□□□ -1.41
TDP1-203ENST00000393454 HBDP02042 147 aa6.23□□□□□ -1.41
TDP1-203ENST00000393454 BTF3P20290 206 aaKnown RBP6.23□□□□□ -1.41
TDP1-203ENST00000393454 EMP1P54849 157 aa6.23□□□□□ -1.41
TDP1-203ENST00000393454 LAGE3Q14657 143 aa6.23□□□□□ -1.41
TDP1-203ENST00000393454 HSPB8Q9UJY1 196 aa6.23□□□□□ -1.41
TDP1-203ENST00000393454 H0Y8G0 127 aa6.22□□□□□ -1.41
TDP1-203ENST00000393454 M0QY20 66 aa6.22□□□□□ -1.41
TDP1-203ENST00000393454 KRTAP10-11P60412 298 aa6.22□□□□□ -1.41
TDP1-203ENST00000393454 Q6ZTI0 123 aa6.22□□□□□ -1.41
TDP1-203ENST00000393454 NEGR1Q7Z3B1 354 aa6.22□□□□□ -1.41
TDP1-203ENST00000393454 OR4C5Q8NGB2 326 aa6.22□□□□□ -1.41
TDP1-203ENST00000393454 IL17DQ8TAD2 202 aa6.22□□□□□ -1.41
TDP1-203ENST00000393454 MAP1LC3CQ9BXW4 147 aa6.22□□□□□ -1.41
TDP1-203ENST00000393454 KIR2DL5BA0A0G2JN68 375 aa6.22□□□□□ -1.41
TDP1-203ENST00000393454 KIR2DL5BA0A0G2JPC4 375 aa6.22□□□□□ -1.41
TDP1-203ENST00000393454 PCP4L1A6NKN8 68 aa6.22□□□□□ -1.41
TDP1-203ENST00000393454 H7C1H1 209 aa6.22□□□□□ -1.41
TDP1-203ENST00000393454 RHODO00212 210 aa6.22□□□□□ -1.41
TDP1-203ENST00000393454 RS1O15537 224 aa6.22□□□□□ -1.41
TDP1-203ENST00000393454 NUDT3O95989 172 aa6.22□□□□□ -1.41
TDP1-203ENST00000393454 IGHV3-53P01767 116 aa6.22□□□□□ -1.41
TDP1-203ENST00000393454 IGHV4-30-4P0DP06 118 aa6.22□□□□□ -1.41
TDP1-203ENST00000393454 FCER1GP30273 86 aa6.22□□□□□ -1.41
TDP1-203ENST00000393454 S100A12P80511 92 aa6.22□□□□□ -1.41
TDP1-203ENST00000393454 DEFB135Q30KP9 77 aa6.22□□□□□ -1.41
TDP1-203ENST00000393454 KIR2DL5AQ8N109 375 aa6.22□□□□□ -1.41
TDP1-203ENST00000393454 KIR2DL5BQ8NHK3 375 aa6.22□□□□□ -1.41
TDP1-203ENST00000393454 DEFB104AQ8WTQ1 72 aa6.22□□□□□ -1.41
TDP1-203ENST00000393454 TMEM70Q9BUB7 260 aa6.22□□□□□ -1.41
TDP1-203ENST00000393454 NACAE9PAV3 2078 aa6.21□□□□□ -1.41
TDP1-203ENST00000393454 A0A096LNJ9 63 aa6.21□□□□□ -1.41
TDP1-203ENST00000393454 SDHAF1A6NFY7 115 aa6.21□□□□□ -1.41
TDP1-203ENST00000393454 LINC01546A6NGU7 62 aa6.21□□□□□ -1.41
TDP1-203ENST00000393454 DAZ2Q13117 558 aaKnown RBP6.21□□□□□ -1.41
TDP1-203ENST00000393454 LGALS9BQ3B8N2 356 aa6.21□□□□□ -1.41
TDP1-203ENST00000393454 ZMAT5Q9UDW3 170 aaKnown RBP6.21□□□□□ -1.41
TDP1-203ENST00000393454 PKD1L1Q8TDX9 2849 aa6.21□□□□□ -1.42
TDP1-203ENST00000393454 TRGV2A0A075B6R0 118 aa6.21□□□□□ -1.42
TDP1-203ENST00000393454 GAGE12BA1L429 117 aa6.21□□□□□ -1.42
TDP1-203ENST00000393454 PLAC8L1A1L4L8 177 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms