RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 PYY3Q5JQD4 70 aa12.7□□□□□ -0.38
MBD4-202ENST00000393278 FA2HQ7L5A8 372 aa12.7□□□□□ -0.38
MBD4-202ENST00000393278 NRACQ8N912 160 aa12.7□□□□□ -0.38
MBD4-202ENST00000393278 MAP1LC3AQ9H492 121 aa12.7□□□□□ -0.38
MBD4-202ENST00000393278 GOLT1BQ9Y3E0 138 aa12.7□□□□□ -0.38
MBD4-202ENST00000393278 TRRAPQ9Y4A5 3859 aa12.7□□□□□ -0.38
MBD4-202ENST00000393278 M0R2P5 195 aa12.7□□□□□ -0.38
MBD4-202ENST00000393278 CSNK1G2-AS1Q8NCQ2 148 aa12.7□□□□□ -0.38
MBD4-202ENST00000393278 PTH2Q96A98 100 aa12.7□□□□□ -0.38
MBD4-202ENST00000393278 NOTCH3Q9UM47 2321 aa12.69□□□□□ -0.38
MBD4-202ENST00000393278 A0A087WWL8 130 aa12.69□□□□□ -0.38
MBD4-202ENST00000393278 AZU1P20160 251 aa12.69□□□□□ -0.38
MBD4-202ENST00000393278 PIK3CD-AS1Q5SR53 167 aa12.69□□□□□ -0.38
MBD4-202ENST00000393278 Q6ZWC4 215 aa12.69□□□□□ -0.38
MBD4-202ENST00000393278 C12orf57Q99622 126 aa12.69□□□□□ -0.38
MBD4-202ENST00000393278 SPXQ9BT56 116 aa12.69□□□□□ -0.38
MBD4-202ENST00000393278 AP5S1Q9NUS5 200 aa12.69□□□□□ -0.38
MBD4-202ENST00000393278 IGHV1-24A0A0C4DH33 117 aa12.68□□□□□ -0.38
MBD4-202ENST00000393278 PRSS47A8MTI9 375 aa12.67□□□□□ -0.38
MBD4-202ENST00000393278 CRYGDP07320 174 aa12.67□□□□□ -0.38
MBD4-202ENST00000393278 JOSD1Q15040 202 aaPredicted RBP12.67□□□□□ -0.38
MBD4-202ENST00000393278 RNASE8Q8TDE3 154 aaKnown RBP12.67□□□□□ -0.38
MBD4-202ENST00000393278 CSTL1Q9H114 145 aa12.67□□□□□ -0.38
MBD4-202ENST00000393278 PMCHL1Q16048 86 aa12.67□□□□□ -0.38
MBD4-202ENST00000393278 IL17DQ8TAD2 202 aa12.67□□□□□ -0.38
MBD4-202ENST00000393278 RASL10AQ92737 203 aa12.67□□□□□ -0.38
MBD4-202ENST00000393278 FAM74A4Q5TZK3 123 aa12.66□□□□□ -0.38
MBD4-202ENST00000393278 ZNF705AQ6ZN79 300 aaPredicted RBP12.66□□□□□ -0.38
MBD4-202ENST00000393278 TMEM263Q8WUH6 116 aaKnown RBP12.66□□□□□ -0.38
MBD4-202ENST00000393278 NXT2Q9NPJ8 142 aaKnown RBP12.66□□□□□ -0.38
MBD4-202ENST00000393278 RIPPLY3P57055 190 aa12.65□□□□□ -0.38
MBD4-202ENST00000393278 SUMO4Q6EEV6 95 aa12.65□□□□□ -0.38
MBD4-202ENST00000393278 IGLV2-18A0A075B6J9 118 aa12.64□□□□□ -0.39
MBD4-202ENST00000393278 LINC01546A6NGU7 62 aa12.64□□□□□ -0.39
MBD4-202ENST00000393278 PPP1R17O96001 155 aa12.64□□□□□ -0.39
MBD4-202ENST00000393278 A8MWV9 139 aa12.64□□□□□ -0.39
MBD4-202ENST00000393278 Q8N8P6 123 aa12.64□□□□□ -0.39
MBD4-202ENST00000393278 RPL39LQ96EH5 51 aaKnown RBP12.64□□□□□ -0.39
MBD4-202ENST00000393278 C20orf78Q9BR46 151 aa12.64□□□□□ -0.39
MBD4-202ENST00000393278 NDUFAF3Q9BU61 184 aa12.64□□□□□ -0.39
MBD4-202ENST00000393278 F5H697 171 aa12.63□□□□□ -0.39
MBD4-202ENST00000393278 ZNF56Q15929 161 aa12.63□□□□□ -0.39
MBD4-202ENST00000393278 OXLD1Q5BKU9 147 aa12.63□□□□□ -0.39
MBD4-202ENST00000393278 C16orf74Q96GX8 76 aa12.63□□□□□ -0.39
MBD4-202ENST00000393278 MRPL16Q9NX20 251 aaKnown RBP12.63□□□□□ -0.39
MBD4-202ENST00000393278 SUMO2P61956 95 aaKnown RBP12.62□□□□□ -0.39
MBD4-202ENST00000393278 RRN3P1Q2M238 152 aa12.61□□□□□ -0.39
MBD4-202ENST00000393278 UFSP1Q6NVU6 142 aa12.61□□□□□ -0.39
MBD4-202ENST00000393278 CDPF1Q6NVV7 123 aa12.61□□□□□ -0.39
MBD4-202ENST00000393278 SMIM2Q9BVW6 85 aa12.61□□□□□ -0.39
MBD4-202ENST00000393278 A0A096LNJ9 63 aa12.61□□□□□ -0.39
MBD4-202ENST00000393278 KIR2DL5BA0A0G2JN68 375 aa12.61□□□□□ -0.39
MBD4-202ENST00000393278 KIR2DL5BA0A0G2JPC4 375 aa12.61□□□□□ -0.39
MBD4-202ENST00000393278 PLAC8L1A1L4L8 177 aa12.61□□□□□ -0.39
MBD4-202ENST00000393278 LEPROTL1O95214 131 aa12.61□□□□□ -0.39
MBD4-202ENST00000393278 KRTDAPP60985 99 aa12.61□□□□□ -0.39
MBD4-202ENST00000393278 KIR2DL5AQ8N109 375 aa12.61□□□□□ -0.39
MBD4-202ENST00000393278 KIR2DL5BQ8NHK3 375 aa12.61□□□□□ -0.39
MBD4-202ENST00000393278 NIT2Q9NQR4 276 aa12.61□□□□□ -0.39
MBD4-202ENST00000393278 M0QY20 66 aa12.6□□□□□ -0.39
MBD4-202ENST00000393278 C3orf79P0CE67 100 aa12.6□□□□□ -0.39
MBD4-202ENST00000393278 DAZ2Q13117 558 aaKnown RBP12.6□□□□□ -0.39
MBD4-202ENST00000393278 CFAP126Q5VTH2 177 aa12.6□□□□□ -0.39
MBD4-202ENST00000393278 STAB1Q9NY15 2570 aa12.59□□□□□ -0.39
MBD4-202ENST00000393278 RS1O15537 224 aa12.59□□□□□ -0.39
MBD4-202ENST00000393278 APOC4P55056 127 aa12.59□□□□□ -0.39
MBD4-202ENST00000393278 EGFEM1PQ0D2K5 195 aa12.59□□□□□ -0.39
MBD4-202ENST00000393278 EDA2RQ9HAV5 297 aa12.59□□□□□ -0.39
MBD4-202ENST00000393278 TRGV1A0A0A0MS02 117 aa12.58□□□□□ -0.4
MBD4-202ENST00000393278 RHODO00212 210 aa12.58□□□□□ -0.4
MBD4-202ENST00000393278 SCGB1D1O95968 90 aa12.58□□□□□ -0.4
MBD4-202ENST00000393278 HBDP02042 147 aa12.58□□□□□ -0.4
MBD4-202ENST00000393278 RPL32P62910 135 aaKnown RBP12.58□□□□□ -0.4
MBD4-202ENST00000393278 LGALS9BQ3B8N2 356 aa12.58□□□□□ -0.4
MBD4-202ENST00000393278 LINC00173Q6ZV60 143 aa12.58□□□□□ -0.4
MBD4-202ENST00000393278 ST20Q9HBF5 79 aa12.58□□□□□ -0.4
MBD4-202ENST00000393278 HSPB8Q9UJY1 196 aa12.58□□□□□ -0.4
MBD4-202ENST00000393278 TRBV6-5A0A0K0K1A5 114 aa12.57□□□□□ -0.4
MBD4-202ENST00000393278 KRTAP10-11P60412 298 aa12.57□□□□□ -0.4
MBD4-202ENST00000393278 NOP10Q9NPE3 64 aaKnown RBP12.57□□□□□ -0.4
MBD4-202ENST00000393278 CMYA5Q8N3K9 4069 aa12.57□□□□□ -0.4
MBD4-202ENST00000393278 IGHV3-73A0A0B4J1V6 119 aa12.57□□□□□ -0.4
MBD4-202ENST00000393278 IGHV4-30-4P0DP06 118 aa12.57□□□□□ -0.4
MBD4-202ENST00000393278 Q6ZTI0 123 aa12.57□□□□□ -0.4
MBD4-202ENST00000393278 TCAPO15273 167 aa12.56□□□□□ -0.4
MBD4-202ENST00000393278 BTF3P20290 206 aaKnown RBP12.56□□□□□ -0.4
MBD4-202ENST00000393278 FCER1GP30273 86 aa12.56□□□□□ -0.4
MBD4-202ENST00000393278 LAGE3Q14657 143 aa12.56□□□□□ -0.4
MBD4-202ENST00000393278 Q8N976 141 aa12.56□□□□□ -0.4
MBD4-202ENST00000393278 OVOL2Q9BRP0 275 aa12.56□□□□□ -0.4
MBD4-202ENST00000393278 TMEM70Q9BUB7 260 aa12.56□□□□□ -0.4
MBD4-202ENST00000393278 NACAE9PAV3 2078 aa12.55□□□□□ -0.4
MBD4-202ENST00000393278 H7C1H1 209 aa12.55□□□□□ -0.4
MBD4-202ENST00000393278 K7EMI3 77 aa12.55□□□□□ -0.4
MBD4-202ENST00000393278 POLR2KP53803 58 aaKnown RBP12.55□□□□□ -0.4
MBD4-202ENST00000393278 ZFP2Q6ZN57 461 aa12.55□□□□□ -0.4
MBD4-202ENST00000393278 ZMAT5Q9UDW3 170 aaKnown RBP12.55□□□□□ -0.4
MBD4-202ENST00000393278 X6R8D5 127 aa12.55□□□□□ -0.4
MBD4-202ENST00000393278 SMIM9A6NGZ8 99 aa12.54□□□□□ -0.4
MBD4-202ENST00000393278 OR4C5Q8NGB2 326 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms