RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 LINC00173Q6ZV60 143 aa12.73□□□□□ -0.37
SSBP3-203ENST00000371319 PTH2Q96A98 100 aa12.73□□□□□ -0.37
SSBP3-203ENST00000371319 ZNF747Q9BV97 191 aa12.73□□□□□ -0.37
SSBP3-203ENST00000371319 NXT2Q9NPJ8 142 aaKnown RBP12.73□□□□□ -0.37
SSBP3-203ENST00000371319 AZU1P20160 251 aa12.73□□□□□ -0.37
SSBP3-203ENST00000371319 ZNF876PQ49A33 203 aa12.73□□□□□ -0.37
SSBP3-203ENST00000371319 Q8N8P6 123 aa12.73□□□□□ -0.37
SSBP3-203ENST00000371319 RPL39LQ96EH5 51 aaKnown RBP12.73□□□□□ -0.37
SSBP3-203ENST00000371319 MCRIP2Q9BUT9 160 aaKnown RBP12.73□□□□□ -0.37
SSBP3-203ENST00000371319 M0R2P5 195 aa12.72□□□□□ -0.37
SSBP3-203ENST00000371319 SUMO4Q6EEV6 95 aa12.72□□□□□ -0.37
SSBP3-203ENST00000371319 MORN3Q6PF18 240 aaPredicted RBP12.72□□□□□ -0.37
SSBP3-203ENST00000371319 TMEM208Q9BTX3 173 aa12.72□□□□□ -0.37
SSBP3-203ENST00000371319 LEPROTL1O95214 131 aa12.71□□□□□ -0.37
SSBP3-203ENST00000371319 GTSCR1Q86UQ5 136 aa12.71□□□□□ -0.37
SSBP3-203ENST00000371319 TENM1Q9UKZ4 2725 aa12.7□□□□□ -0.38
SSBP3-203ENST00000371319 IGHV3OR16-12A0A075B7B8 117 aa12.7□□□□□ -0.38
SSBP3-203ENST00000371319 IGLL1P15814 213 aa12.7□□□□□ -0.38
SSBP3-203ENST00000371319 PIK3CD-AS1Q5SR53 167 aa12.7□□□□□ -0.38
SSBP3-203ENST00000371319 CSNK1G2-AS1Q8NCQ2 148 aa12.7□□□□□ -0.38
SSBP3-203ENST00000371319 IL17DQ8TAD2 202 aa12.7□□□□□ -0.38
SSBP3-203ENST00000371319 C20orf78Q9BR46 151 aa12.7□□□□□ -0.38
SSBP3-203ENST00000371319 SPXQ9BT56 116 aa12.7□□□□□ -0.38
SSBP3-203ENST00000371319 NIPBLQ6KC79 2804 aaeCLIP12.7□□□□□ -0.38
SSBP3-203ENST00000371319 SMIM2Q9BVW6 85 aa12.69□□□□□ -0.38
SSBP3-203ENST00000371319 PCP4L1A6NKN8 68 aa12.69□□□□□ -0.38
SSBP3-203ENST00000371319 WIPF1O43516 503 aa12.69□□□□□ -0.38
SSBP3-203ENST00000371319 BTF3P20290 206 aaKnown RBP12.69□□□□□ -0.38
SSBP3-203ENST00000371319 SUMO2P61956 95 aaKnown RBP12.69□□□□□ -0.38
SSBP3-203ENST00000371319 FAM74A4Q5TZK3 123 aa12.69□□□□□ -0.38
SSBP3-203ENST00000371319 SPATA12Q7Z6I5 190 aa12.69□□□□□ -0.38
SSBP3-203ENST00000371319 C1QTNF4Q9BXJ3 329 aa12.69□□□□□ -0.38
SSBP3-203ENST00000371319 GOLT1BQ9Y3E0 138 aa12.69□□□□□ -0.38
SSBP3-203ENST00000371319 PPP1R17O96001 155 aa12.68□□□□□ -0.38
SSBP3-203ENST00000371319 HBDP02042 147 aa12.68□□□□□ -0.38
SSBP3-203ENST00000371319 UFSP1Q6NVU6 142 aa12.68□□□□□ -0.38
SSBP3-203ENST00000371319 TEX43Q6ZNM6 134 aa12.68□□□□□ -0.38
SSBP3-203ENST00000371319 RNASE8Q8TDE3 154 aaKnown RBP12.68□□□□□ -0.38
SSBP3-203ENST00000371319 HSPB8Q9UJY1 196 aa12.68□□□□□ -0.38
SSBP3-203ENST00000371319 TEP1Q99973 2627 aaKnown RBP12.68□□□□□ -0.38
SSBP3-203ENST00000371319 F5H697 171 aa12.67□□□□□ -0.38
SSBP3-203ENST00000371319 MRPL16Q9NX20 251 aaKnown RBP12.67□□□□□ -0.38
SSBP3-203ENST00000371319 ZNF56Q15929 161 aa12.66□□□□□ -0.38
SSBP3-203ENST00000371319 TMEM70Q9BUB7 260 aa12.66□□□□□ -0.38
SSBP3-203ENST00000371319 A8MWV9 139 aa12.65□□□□□ -0.38
SSBP3-203ENST00000371319 SYS1-DBNDD2H3BUS1 97 aa12.65□□□□□ -0.38
SSBP3-203ENST00000371319 M0QY20 66 aa12.65□□□□□ -0.38
SSBP3-203ENST00000371319 TCAPO15273 167 aa12.65□□□□□ -0.38
SSBP3-203ENST00000371319 FCER1GP30273 86 aa12.65□□□□□ -0.38
SSBP3-203ENST00000371319 RPL32P62910 135 aaKnown RBP12.65□□□□□ -0.38
SSBP3-203ENST00000371319 S100A12P80511 92 aa12.65□□□□□ -0.38
SSBP3-203ENST00000371319 ZNF705AQ6ZN79 300 aaPredicted RBP12.65□□□□□ -0.38
SSBP3-203ENST00000371319 TMEM263Q8WUH6 116 aaKnown RBP12.65□□□□□ -0.38
SSBP3-203ENST00000371319 JMJD1CQ15652 2540 aa12.65□□□□□ -0.38
SSBP3-203ENST00000371319 LAGE3Q14657 143 aa12.64□□□□□ -0.39
SSBP3-203ENST00000371319 C3orf56Q8N813 242 aa12.64□□□□□ -0.39
SSBP3-203ENST00000371319 CSTL1Q9H114 145 aa12.64□□□□□ -0.39
SSBP3-203ENST00000371319 NACAE9PAV3 2078 aa12.64□□□□□ -0.39
SSBP3-203ENST00000371319 TRBV6-5A0A0K0K1A5 114 aa12.64□□□□□ -0.39
SSBP3-203ENST00000371319 RS1O15537 224 aa12.64□□□□□ -0.39
SSBP3-203ENST00000371319 CFAP126Q5VTH2 177 aa12.64□□□□□ -0.39
SSBP3-203ENST00000371319 SHISA2Q6UWI4 295 aa12.64□□□□□ -0.39
SSBP3-203ENST00000371319 ZNF664Q8N3J9 261 aa12.64□□□□□ -0.39
SSBP3-203ENST00000371319 TMEM158Q8WZ71 300 aa12.64□□□□□ -0.39
SSBP3-203ENST00000371319 MAP1LC3CQ9BXW4 147 aa12.64□□□□□ -0.39
SSBP3-203ENST00000371319 ST20Q9HBF5 79 aa12.64□□□□□ -0.39
SSBP3-203ENST00000371319 VWFP04275 2813 aa12.63□□□□□ -0.39
SSBP3-203ENST00000371319 ATRQ13535 2644 aa12.63□□□□□ -0.39
SSBP3-203ENST00000371319 PLAC8L1A1L4L8 177 aa12.63□□□□□ -0.39
SSBP3-203ENST00000371319 POLR2KP53803 58 aaKnown RBP12.63□□□□□ -0.39
SSBP3-203ENST00000371319 NDUFAF3Q9BU61 184 aa12.63□□□□□ -0.39
SSBP3-203ENST00000371319 EDA2RQ9HAV5 297 aa12.63□□□□□ -0.39
SSBP3-203ENST00000371319 IGHV3-73A0A0B4J1V6 119 aa12.62□□□□□ -0.39
SSBP3-203ENST00000371319 PET117Q6UWS5 81 aa12.62□□□□□ -0.39
SSBP3-203ENST00000371319 C12orf54Q6X4T0 127 aa12.62□□□□□ -0.39
SSBP3-203ENST00000371319 C16orf74Q96GX8 76 aa12.62□□□□□ -0.39
SSBP3-203ENST00000371319 PKIAP61925 76 aa12.61□□□□□ -0.39
SSBP3-203ENST00000371319 PRO1933Q9H354 126 aa12.61□□□□□ -0.39
SSBP3-203ENST00000371319 K7EMI3 77 aa12.6□□□□□ -0.39
SSBP3-203ENST00000371319 NEGR1Q7Z3B1 354 aa12.6□□□□□ -0.39
SSBP3-203ENST00000371319 TRGV1A0A0A0MS02 117 aa12.6□□□□□ -0.39
SSBP3-203ENST00000371319 RHODO00212 210 aa12.6□□□□□ -0.39
SSBP3-203ENST00000371319 DAZ2Q13117 558 aaKnown RBP12.6□□□□□ -0.39
SSBP3-203ENST00000371319 ORMDL2Q53FV1 153 aa12.6□□□□□ -0.39
SSBP3-203ENST00000371319 Q6ZSN1 163 aa12.6□□□□□ -0.39
SSBP3-203ENST00000371319 IFI27L1Q96BM0 104 aa12.6□□□□□ -0.39
SSBP3-203ENST00000371319 FBN1P35555 2871 aaKnown RBP12.59□□□□□ -0.39
SSBP3-203ENST00000371319 SDHAF1A6NFY7 115 aa12.59□□□□□ -0.39
SSBP3-203ENST00000371319 RRN3P1Q2M238 152 aa12.59□□□□□ -0.39
SSBP3-203ENST00000371319 Q6ZTI0 123 aa12.59□□□□□ -0.39
SSBP3-203ENST00000371319 KIR2DL5BA0A0G2JN68 375 aa12.58□□□□□ -0.4
SSBP3-203ENST00000371319 KIR2DL5BA0A0G2JPC4 375 aa12.58□□□□□ -0.4
SSBP3-203ENST00000371319 TRBV27A0A0K0K1C4 114 aa12.58□□□□□ -0.4
SSBP3-203ENST00000371319 VCYO14598 125 aa12.58□□□□□ -0.4
SSBP3-203ENST00000371319 NUDT3O95989 172 aa12.58□□□□□ -0.4
SSBP3-203ENST00000371319 LGALS9BQ3B8N2 356 aa12.58□□□□□ -0.4
SSBP3-203ENST00000371319 LINC01545Q5VT33 79 aa12.58□□□□□ -0.4
SSBP3-203ENST00000371319 ATOH7Q8N100 152 aa12.58□□□□□ -0.4
SSBP3-203ENST00000371319 KIR2DL5AQ8N109 375 aa12.58□□□□□ -0.4
SSBP3-203ENST00000371319 VAMP8Q9BV40 100 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms