RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 LINC01356Q8N9X3 169 aa8.41□□□□□ -1.06
RPL28-201ENST00000344063 NDUFA12Q9UI09 145 aa8.41□□□□□ -1.06
RPL28-201ENST00000344063 I3L3M4 83 aa8.41□□□□□ -1.06
RPL28-201ENST00000344063 Q6ZUT4 128 aa8.41□□□□□ -1.06
RPL28-201ENST00000344063 C22orf34Q6ZV56 151 aa8.41□□□□□ -1.06
RPL28-201ENST00000344063 PRIMA1Q86XR5 153 aa8.41□□□□□ -1.06
RPL28-201ENST00000344063 CMC4P56277 68 aaPredicted RBP8.41□□□□□ -1.06
RPL28-201ENST00000344063 RPL39P62891 51 aaKnown RBP8.41□□□□□ -1.06
RPL28-201ENST00000344063 E9PLD3 99 aa8.41□□□□□ -1.06
RPL28-201ENST00000344063 INSP01308 110 aa8.41□□□□□ -1.06
RPL28-201ENST00000344063 IGHV3-53P01767 116 aa8.41□□□□□ -1.06
RPL28-201ENST00000344063 DEFB131AP59861 70 aa8.41□□□□□ -1.06
RPL28-201ENST00000344063 RASL10AQ92737 203 aa8.41□□□□□ -1.06
RPL28-201ENST00000344063 IGHV3-38A0A0C4DH36 116 aa8.4□□□□□ -1.06
RPL28-201ENST00000344063 CRPP02741 224 aa8.4□□□□□ -1.06
RPL28-201ENST00000344063 LAMTOR3Q9UHA4 124 aa8.4□□□□□ -1.06
RPL28-201ENST00000344063 CRYGBP07316 175 aa8.4□□□□□ -1.07
RPL28-201ENST00000344063 C16orf54Q6UWD8 224 aa8.39□□□□□ -1.07
RPL28-201ENST00000344063 FSTL3O95633 263 aa8.39□□□□□ -1.07
RPL28-201ENST00000344063 RBM3P98179 157 aaKnown RBP8.39□□□□□ -1.07
RPL28-201ENST00000344063 C11orf44Q8N8P7 122 aa8.39□□□□□ -1.07
RPL28-201ENST00000344063 TRGV4A0A0C4DH28 118 aa8.39□□□□□ -1.07
RPL28-201ENST00000344063 IGHV3-16A0A0C4DH30 117 aa8.39□□□□□ -1.07
RPL28-201ENST00000344063 C9orf47Q6ZRZ4 202 aa8.39□□□□□ -1.07
RPL28-201ENST00000344063 Q8NA96 180 aa8.39□□□□□ -1.07
RPL28-201ENST00000344063 PAX4O43316 350 aa8.39□□□□□ -1.07
RPL28-201ENST00000344063 CRIP1P50238 77 aa8.39□□□□□ -1.07
RPL28-201ENST00000344063 MUSTN1Q8IVN3 82 aa8.39□□□□□ -1.07
RPL28-201ENST00000344063 TMEM126AQ9H061 195 aa8.39□□□□□ -1.07
RPL28-201ENST00000344063 TRGV1A0A0A0MS02 117 aa8.38□□□□□ -1.07
RPL28-201ENST00000344063 TCL1BO95988 128 aa8.38□□□□□ -1.07
RPL28-201ENST00000344063 ARHGAP32A7KAX9 2087 aa8.38□□□□□ -1.07
RPL28-201ENST00000344063 C11orf86A6NJI1 115 aa8.38□□□□□ -1.07
RPL28-201ENST00000344063 TMEM86BQ8N661 226 aa8.38□□□□□ -1.07
RPL28-201ENST00000344063 HERV-K104P63124 156 aa8.38□□□□□ -1.07
RPL28-201ENST00000344063 J3QKU1 62 aa8.38□□□□□ -1.07
RPL28-201ENST00000344063 CFAP161Q6P656 301 aa8.38□□□□□ -1.07
RPL28-201ENST00000344063 Q71RC1 249 aaPredicted RBP8.38□□□□□ -1.07
RPL28-201ENST00000344063 RHOHQ15669 191 aa8.37□□□□□ -1.07
RPL28-201ENST00000344063 BAALCQ8WXS3 180 aa8.37□□□□□ -1.07
RPL28-201ENST00000344063 A0A0J9YXV3 536 aa8.37□□□□□ -1.07
RPL28-201ENST00000344063 GAS8-AS1O95177 125 aa8.37□□□□□ -1.07
RPL28-201ENST00000344063 LINC01620Q4KN68 170 aa8.37□□□□□ -1.07
RPL28-201ENST00000344063 TRAV12-1A0A0B4J245 112 aa8.37□□□□□ -1.07
RPL28-201ENST00000344063 MRPL23Q16540 153 aaKnown RBP8.37□□□□□ -1.07
RPL28-201ENST00000344063 C5orf56Q8N8D9 126 aa8.37□□□□□ -1.07
RPL28-201ENST00000344063 C5orf42Q9H799 3197 aa8.36□□□□□ -1.07
RPL28-201ENST00000344063 INAFM2P0DMQ5 153 aa8.36□□□□□ -1.07
RPL28-201ENST00000344063 DAND5Q8N907 189 aa8.36□□□□□ -1.07
RPL28-201ENST00000344063 CHCHD5Q9BSY4 110 aa8.36□□□□□ -1.07
RPL28-201ENST00000344063 UFSP1Q6NVU6 142 aa8.36□□□□□ -1.07
RPL28-201ENST00000344063 TM2D2Q9BX73 214 aa8.36□□□□□ -1.07
RPL28-201ENST00000344063 JPT2Q9H910 190 aa8.36□□□□□ -1.07
RPL28-201ENST00000344063 ODF3BA8MYP8 253 aa8.36□□□□□ -1.07
RPL28-201ENST00000344063 IGLC6P0CF74 106 aa8.36□□□□□ -1.07
RPL28-201ENST00000344063 ADORA2A-AS1P86434 159 aa8.36□□□□□ -1.07
RPL28-201ENST00000344063 TCTEX1D4Q5JR98 221 aa8.36□□□□□ -1.07
RPL28-201ENST00000344063 DPH3Q96FX2 82 aa8.36□□□□□ -1.07
RPL28-201ENST00000344063 FAM236AA0A1B0GUQ0 79 aa8.35□□□□□ -1.07
RPL28-201ENST00000344063 FAM236BA0A1B0GV22 79 aa8.35□□□□□ -1.07
RPL28-201ENST00000344063 MED14OSP0DP75 135 aa8.35□□□□□ -1.07
RPL28-201ENST00000344063 SIRPDQ9H106 197 aa8.35□□□□□ -1.07
RPL28-201ENST00000344063 ELANEP08246 267 aa8.35□□□□□ -1.07
RPL28-201ENST00000344063 DNAJC30Q96LL9 226 aa8.35□□□□□ -1.07
RPL28-201ENST00000344063 OPRPNQ99935 248 aaPredicted RBP8.35□□□□□ -1.07
RPL28-201ENST00000344063 RNF223E7ERA6 249 aa8.35□□□□□ -1.07
RPL28-201ENST00000344063 ZFP36P26651 326 aaKnown RBP8.35□□□□□ -1.07
RPL28-201ENST00000344063 TMEM258P61165 79 aa8.35□□□□□ -1.07
RPL28-201ENST00000344063 NSUN5P1Q3KNT7 163 aa8.35□□□□□ -1.07
RPL28-201ENST00000344063 J3QLI3 93 aa8.35□□□□□ -1.07
RPL28-201ENST00000344063 NDUFA11Q86Y39 141 aa8.34□□□□□ -1.07
RPL28-201ENST00000344063 CLEC2BQ92478 149 aa8.34□□□□□ -1.07
RPL28-201ENST00000344063 LY6LH3BQJ8 138 aa8.34□□□□□ -1.07
RPL28-201ENST00000344063 LEPROTO15243 131 aa8.34□□□□□ -1.07
RPL28-201ENST00000344063 UBE2E2Q96LR5 201 aa8.34□□□□□ -1.07
RPL28-201ENST00000344063 SPANXDQ9BXN6 97 aa8.34□□□□□ -1.07
RPL28-201ENST00000344063 LINC01619G3V211 115 aa8.33□□□□□ -1.08
RPL28-201ENST00000344063 SOCS3O14543 225 aa8.33□□□□□ -1.08
RPL28-201ENST00000344063 IGLV2-11P01706 119 aa8.33□□□□□ -1.08
RPL28-201ENST00000344063 HTN3P15516 51 aa8.33□□□□□ -1.08
RPL28-201ENST00000344063 XGP55808 180 aa8.33□□□□□ -1.08
RPL28-201ENST00000344063 AJUBAQ96IF1 538 aa8.33□□□□□ -1.08
RPL28-201ENST00000344063 TINCRA0A1B0GVN0 87 aa8.33□□□□□ -1.08
RPL28-201ENST00000344063 HAMPP81172 84 aa8.33□□□□□ -1.08
RPL28-201ENST00000344063 SUMO4Q6EEV6 95 aa8.33□□□□□ -1.08
RPL28-201ENST00000344063 IGHV4-61A0A0C4DH41 118 aa8.32□□□□□ -1.08
RPL28-201ENST00000344063 TEX49A0A1B0GTD5 131 aa8.32□□□□□ -1.08
RPL28-201ENST00000344063 TOMM6Q96B49 74 aa8.32□□□□□ -1.08
RPL28-201ENST00000344063 HOXD3P31249 432 aaPredicted RBP8.32□□□□□ -1.08
RPL28-201ENST00000344063 PFN2P35080 140 aa8.32□□□□□ -1.08
RPL28-201ENST00000344063 MYO9AB2RTY4 2548 aa8.31□□□□□ -1.08
RPL28-201ENST00000344063 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.31□□□□□ -1.08
RPL28-201ENST00000344063 IGKV2-29A2NJV5 120 aaPredicted RBP8.31□□□□□ -1.08
RPL28-201ENST00000344063 NDUFV3P56181 108 aaKnown RBP8.31□□□□□ -1.08
RPL28-201ENST00000344063 ATP6V0E2Q8NHE4 81 aa8.31□□□□□ -1.08
RPL28-201ENST00000344063 SPANXCQ9NY87 97 aa8.31□□□□□ -1.08
RPL28-201ENST00000344063 TLN1Q9Y490 2541 aaKnown RBP8.31□□□□□ -1.08
RPL28-201ENST00000344063 K7EMT4 169 aa8.31□□□□□ -1.08
RPL28-201ENST00000344063 EBI3Q14213 229 aa8.31□□□□□ -1.08
RPL28-201ENST00000344063 Q8N1Y9 231 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms