RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 SHISA2Q6UWI4 295 aa12.42□□□□□ -0.42
FRMD4A-202ENST00000342409 GTSCR1Q86UQ5 136 aa12.42□□□□□ -0.42
FRMD4A-202ENST00000342409 RASL10AQ92737 203 aa12.42□□□□□ -0.42
FRMD4A-202ENST00000342409 MRAP2Q96G30 205 aa12.42□□□□□ -0.42
FRMD4A-202ENST00000342409 LAMTOR2Q9Y2Q5 125 aa12.42□□□□□ -0.42
FRMD4A-202ENST00000342409 DNAH3Q8TD57 4116 aa12.42□□□□□ -0.42
FRMD4A-202ENST00000342409 ANK2Q01484 3957 aa12.42□□□□□ -0.42
FRMD4A-202ENST00000342409 IGHV3OR16-12A0A075B7B8 117 aa12.42□□□□□ -0.42
FRMD4A-202ENST00000342409 A0A087WWL8 130 aa12.42□□□□□ -0.42
FRMD4A-202ENST00000342409 IGHV1-24A0A0C4DH33 117 aa12.42□□□□□ -0.42
FRMD4A-202ENST00000342409 CRYGDP07320 174 aa12.42□□□□□ -0.42
FRMD4A-202ENST00000342409 ZNF415Q09FC8 603 aa12.42□□□□□ -0.42
FRMD4A-202ENST00000342409 MORN3Q6PF18 240 aaPredicted RBP12.42□□□□□ -0.42
FRMD4A-202ENST00000342409 SYT8Q8NBV8 401 aa12.42□□□□□ -0.42
FRMD4A-202ENST00000342409 IL17DQ8TAD2 202 aa12.42□□□□□ -0.42
FRMD4A-202ENST00000342409 IGLV2-18A0A075B6J9 118 aa12.41□□□□□ -0.42
FRMD4A-202ENST00000342409 MGPP08493 103 aa12.41□□□□□ -0.42
FRMD4A-202ENST00000342409 C12orf54Q6X4T0 127 aa12.41□□□□□ -0.42
FRMD4A-202ENST00000342409 TMEM158Q8WZ71 300 aa12.41□□□□□ -0.42
FRMD4A-202ENST00000342409 TMEM208Q9BTX3 173 aa12.41□□□□□ -0.42
FRMD4A-202ENST00000342409 PRSS47A8MTI9 375 aa12.4□□□□□ -0.42
FRMD4A-202ENST00000342409 JOSD1Q15040 202 aaPredicted RBP12.4□□□□□ -0.42
FRMD4A-202ENST00000342409 PRSS3P2Q8NHM4 247 aa12.4□□□□□ -0.42
FRMD4A-202ENST00000342409 RNASE8Q8TDE3 154 aaKnown RBP12.4□□□□□ -0.42
FRMD4A-202ENST00000342409 PTH2Q96A98 100 aa12.4□□□□□ -0.42
FRMD4A-202ENST00000342409 A0A096LNJ9 63 aa12.4□□□□□ -0.43
FRMD4A-202ENST00000342409 M0R2P5 195 aa12.4□□□□□ -0.43
FRMD4A-202ENST00000342409 RPL39LQ96EH5 51 aaKnown RBP12.4□□□□□ -0.43
FRMD4A-202ENST00000342409 LINC01546A6NGU7 62 aa12.39□□□□□ -0.43
FRMD4A-202ENST00000342409 SUMO4Q6EEV6 95 aa12.39□□□□□ -0.43
FRMD4A-202ENST00000342409 ZNF705AQ6ZN79 300 aaPredicted RBP12.39□□□□□ -0.43
FRMD4A-202ENST00000342409 FA2HQ7L5A8 372 aa12.39□□□□□ -0.43
FRMD4A-202ENST00000342409 MAP1LC3AQ9H492 121 aa12.39□□□□□ -0.43
FRMD4A-202ENST00000342409 AP5S1Q9NUS5 200 aa12.39□□□□□ -0.43
FRMD4A-202ENST00000342409 NBEAL2Q6ZNJ1 2754 aa12.38□□□□□ -0.43
FRMD4A-202ENST00000342409 LINC00173Q6ZV60 143 aa12.38□□□□□ -0.43
FRMD4A-202ENST00000342409 C1QTNF4Q9BXJ3 329 aa12.38□□□□□ -0.43
FRMD4A-202ENST00000342409 PLAC8L1A1L4L8 177 aa12.37□□□□□ -0.43
FRMD4A-202ENST00000342409 SMIM17P0DL12 118 aa12.37□□□□□ -0.43
FRMD4A-202ENST00000342409 OXLD1Q5BKU9 147 aa12.37□□□□□ -0.43
FRMD4A-202ENST00000342409 PIK3CD-AS1Q5SR53 167 aa12.37□□□□□ -0.43
FRMD4A-202ENST00000342409 UFSP1Q6NVU6 142 aa12.37□□□□□ -0.43
FRMD4A-202ENST00000342409 SPXQ9BT56 116 aa12.37□□□□□ -0.43
FRMD4A-202ENST00000342409 CSTL1Q9H114 145 aa12.37□□□□□ -0.43
FRMD4A-202ENST00000342409 GOLT1BQ9Y3E0 138 aa12.37□□□□□ -0.43
FRMD4A-202ENST00000342409 FAM74A4Q5TZK3 123 aa12.37□□□□□ -0.43
FRMD4A-202ENST00000342409 Q8N976 141 aa12.37□□□□□ -0.43
FRMD4A-202ENST00000342409 MRPL16Q9NX20 251 aaKnown RBP12.37□□□□□ -0.43
FRMD4A-202ENST00000342409 Q8N8P6 123 aa12.36□□□□□ -0.43
FRMD4A-202ENST00000342409 TMEM263Q8WUH6 116 aaKnown RBP12.36□□□□□ -0.43
FRMD4A-202ENST00000342409 C3orf79P0CE67 100 aa12.35□□□□□ -0.43
FRMD4A-202ENST00000342409 KRTAP10-11P60412 298 aa12.35□□□□□ -0.43
FRMD4A-202ENST00000342409 NXT2Q9NPJ8 142 aaKnown RBP12.34□□□□□ -0.43
FRMD4A-202ENST00000342409 M0QY20 66 aa12.34□□□□□ -0.43
FRMD4A-202ENST00000342409 CFAP126Q5VTH2 177 aa12.34□□□□□ -0.43
FRMD4A-202ENST00000342409 SMIM2Q9BVW6 85 aa12.34□□□□□ -0.43
FRMD4A-202ENST00000342409 NIT2Q9NQR4 276 aa12.34□□□□□ -0.43
FRMD4A-202ENST00000342409 F5H697 171 aa12.33□□□□□ -0.44
FRMD4A-202ENST00000342409 KRTDAPP60985 99 aa12.33□□□□□ -0.44
FRMD4A-202ENST00000342409 SUMO2P61956 95 aaKnown RBP12.33□□□□□ -0.44
FRMD4A-202ENST00000342409 C20orf78Q9BR46 151 aa12.33□□□□□ -0.44
FRMD4A-202ENST00000342409 A8MWV9 139 aa12.32□□□□□ -0.44
FRMD4A-202ENST00000342409 RS1O15537 224 aa12.32□□□□□ -0.44
FRMD4A-202ENST00000342409 ZNF56Q15929 161 aa12.32□□□□□ -0.44
FRMD4A-202ENST00000342409 Q6ZSN1 163 aa12.32□□□□□ -0.44
FRMD4A-202ENST00000342409 SPATA12Q7Z6I5 190 aa12.32□□□□□ -0.44
FRMD4A-202ENST00000342409 IGHV3-73A0A0B4J1V6 119 aa12.31□□□□□ -0.44
FRMD4A-202ENST00000342409 LEPROTL1O95214 131 aa12.31□□□□□ -0.44
FRMD4A-202ENST00000342409 EGFEM1PQ0D2K5 195 aa12.31□□□□□ -0.44
FRMD4A-202ENST00000342409 Q6ZTI0 123 aa12.31□□□□□ -0.44
FRMD4A-202ENST00000342409 TCAPO15273 167 aa12.31□□□□□ -0.44
FRMD4A-202ENST00000342409 POLR2KP53803 58 aaKnown RBP12.31□□□□□ -0.44
FRMD4A-202ENST00000342409 DAZ2Q13117 558 aaKnown RBP12.31□□□□□ -0.44
FRMD4A-202ENST00000342409 C16orf74Q96GX8 76 aa12.31□□□□□ -0.44
FRMD4A-202ENST00000342409 X6R8D5 127 aa12.31□□□□□ -0.44
FRMD4A-202ENST00000342409 TRBV6-5A0A0K0K1A5 114 aa12.3□□□□□ -0.44
FRMD4A-202ENST00000342409 SCGB1D1O95968 90 aa12.3□□□□□ -0.44
FRMD4A-202ENST00000342409 RRN3P1Q2M238 152 aa12.3□□□□□ -0.44
FRMD4A-202ENST00000342409 EDA2RQ9HAV5 297 aa12.3□□□□□ -0.44
FRMD4A-202ENST00000342409 NOP10Q9NPE3 64 aaKnown RBP12.3□□□□□ -0.44
FRMD4A-202ENST00000342409 TRGV1A0A0A0MS02 117 aa12.29□□□□□ -0.44
FRMD4A-202ENST00000342409 KIR2DL5BA0A0G2JN68 375 aa12.29□□□□□ -0.44
FRMD4A-202ENST00000342409 KIR2DL5BA0A0G2JPC4 375 aa12.29□□□□□ -0.44
FRMD4A-202ENST00000342409 PPP1R17O96001 155 aa12.29□□□□□ -0.44
FRMD4A-202ENST00000342409 HBDP02042 147 aa12.29□□□□□ -0.44
FRMD4A-202ENST00000342409 RPL32P62910 135 aaKnown RBP12.29□□□□□ -0.44
FRMD4A-202ENST00000342409 NEGR1Q7Z3B1 354 aa12.29□□□□□ -0.44
FRMD4A-202ENST00000342409 KIR2DL5AQ8N109 375 aa12.29□□□□□ -0.44
FRMD4A-202ENST00000342409 KIR2DL5BQ8NHK3 375 aa12.29□□□□□ -0.44
FRMD4A-202ENST00000342409 OVOL2Q9BRP0 275 aa12.29□□□□□ -0.44
FRMD4A-202ENST00000342409 NDUFAF3Q9BU61 184 aa12.29□□□□□ -0.44
FRMD4A-202ENST00000342409 Q9UF83 564 aa12.29□□□□□ -0.44
FRMD4A-202ENST00000342409 P0DMU3 169 aa12.28□□□□□ -0.44
FRMD4A-202ENST00000342409 FAM231AP0DMU4 169 aa12.28□□□□□ -0.44
FRMD4A-202ENST00000342409 FAM231CP0DMU5 169 aa12.28□□□□□ -0.44
FRMD4A-202ENST00000342409 IGHV4-30-4P0DP06 118 aa12.28□□□□□ -0.44
FRMD4A-202ENST00000342409 FCER1GP30273 86 aa12.28□□□□□ -0.44
FRMD4A-202ENST00000342409 TMEM70Q9BUB7 260 aa12.28□□□□□ -0.44
FRMD4A-202ENST00000342409 ST20Q9HBF5 79 aa12.28□□□□□ -0.44
FRMD4A-202ENST00000342409 LGALS9BQ3B8N2 356 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms