RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 ITLN2Q8WWU7 325 aaPredicted RBP12.85□□□□□ -0.35
CDK11B-201ENST00000340677 U3KQK5 164 aa12.85□□□□□ -0.35
CDK11B-201ENST00000340677 SCGB1D4Q6XE38 83 aa12.84□□□□□ -0.35
CDK11B-201ENST00000340677 FMC1Q96HJ9 113 aa12.84□□□□□ -0.35
CDK11B-201ENST00000340677 RBM12B-AS1Q9P1G2 102 aa12.84□□□□□ -0.35
CDK11B-201ENST00000340677 IGF1P05019 195 aa12.84□□□□□ -0.35
CDK11B-201ENST00000340677 P0C879 139 aa12.84□□□□□ -0.35
CDK11B-201ENST00000340677 GNLYP22749 145 aa12.84□□□□□ -0.35
CDK11B-201ENST00000340677 DSCAMO60469 2012 aa12.83□□□□□ -0.35
CDK11B-201ENST00000340677 ARFGEF3Q5TH69 2177 aa12.83□□□□□ -0.35
CDK11B-201ENST00000340677 C17orf98A8MV24 154 aa12.83□□□□□ -0.36
CDK11B-201ENST00000340677 NDUFA3O95167 84 aa12.83□□□□□ -0.36
CDK11B-201ENST00000340677 IGHV3-33P01772 117 aa12.83□□□□□ -0.36
CDK11B-201ENST00000340677 APOC4P55056 127 aa12.83□□□□□ -0.36
CDK11B-201ENST00000340677 SLC50A1Q9BRV3 221 aa12.83□□□□□ -0.36
CDK11B-201ENST00000340677 DSCAML1Q8TD84 2053 aa12.83□□□□□ -0.36
CDK11B-201ENST00000340677 HIVEP3Q5T1R4 2406 aa12.83□□□□□ -0.36
CDK11B-201ENST00000340677 PLAUP00749 431 aa12.83□□□□□ -0.36
CDK11B-201ENST00000340677 TFF1P04155 84 aa12.83□□□□□ -0.36
CDK11B-201ENST00000340677 RIGQ13278 110 aa12.83□□□□□ -0.36
CDK11B-201ENST00000340677 RUSC1-AS1Q66K80 236 aa12.83□□□□□ -0.36
CDK11B-201ENST00000340677 ITPR1Q14643 2758 aa12.82□□□□□ -0.36
CDK11B-201ENST00000340677 FSTL3O95633 263 aa12.82□□□□□ -0.36
CDK11B-201ENST00000340677 LINC00305Q7Z4B0 112 aa12.82□□□□□ -0.36
CDK11B-201ENST00000340677 DYNLRB1Q9NP97 96 aa12.82□□□□□ -0.36
CDK11B-201ENST00000340677 ZNF815PA8K554 130 aa12.81□□□□□ -0.36
CDK11B-201ENST00000340677 H7C2G1 150 aa12.81□□□□□ -0.36
CDK11B-201ENST00000340677 TIMM17BO60830 172 aa12.81□□□□□ -0.36
CDK11B-201ENST00000340677 BRWD1-AS2P59051 145 aa12.81□□□□□ -0.36
CDK11B-201ENST00000340677 ORMDL3Q8N138 153 aa12.81□□□□□ -0.36
CDK11B-201ENST00000340677 IGSF10Q6WRI0 2623 aa12.81□□□□□ -0.36
CDK11B-201ENST00000340677 USF3Q68DE3 2245 aa12.81□□□□□ -0.36
CDK11B-201ENST00000340677 ICE1Q9Y2F5 2266 aa12.81□□□□□ -0.36
CDK11B-201ENST00000340677 PRR20EP86478 221 aa12.81□□□□□ -0.36
CDK11B-201ENST00000340677 PRR20CP86479 221 aa12.81□□□□□ -0.36
CDK11B-201ENST00000340677 PRR20DP86480 221 aa12.81□□□□□ -0.36
CDK11B-201ENST00000340677 PRR20BP86481 221 aa12.81□□□□□ -0.36
CDK11B-201ENST00000340677 PRR20AP86496 221 aa12.81□□□□□ -0.36
CDK11B-201ENST00000340677 ZNF329Q86UD4 541 aa12.81□□□□□ -0.36
CDK11B-201ENST00000340677 J3QKU1 62 aa12.8□□□□□ -0.36
CDK11B-201ENST00000340677 ZNF843Q8N446 348 aa12.8□□□□□ -0.36
CDK11B-201ENST00000340677 GCN1Q92616 2671 aaKnown RBP12.8□□□□□ -0.36
CDK11B-201ENST00000340677 A0A0B4J2C4 111 aa12.8□□□□□ -0.36
CDK11B-201ENST00000340677 LINC01559Q495D7 138 aa12.8□□□□□ -0.36
CDK11B-201ENST00000340677 LYPD5Q6UWN5 251 aa12.8□□□□□ -0.36
CDK11B-201ENST00000340677 ANKHD1Q8IWZ3 2542 aaKnown RBP12.79□□□□□ -0.36
CDK11B-201ENST00000340677 IGHV3-43A0A0B4J1X8 118 aa12.79□□□□□ -0.36
CDK11B-201ENST00000340677 C12orf77C9JDV5 145 aa12.79□□□□□ -0.36
CDK11B-201ENST00000340677 IGHV3-43DP0DP04 118 aa12.79□□□□□ -0.36
CDK11B-201ENST00000340677 PLNP26678 52 aa12.79□□□□□ -0.36
CDK11B-201ENST00000340677 TMEM30BQ3MIR4 351 aa12.79□□□□□ -0.36
CDK11B-201ENST00000340677 FAM223BA6NKX1 122 aa12.78□□□□□ -0.36
CDK11B-201ENST00000340677 EIF4EBP3O60516 100 aaPredicted RBP12.78□□□□□ -0.36
CDK11B-201ENST00000340677 GAFA1Q96PS6 74 aa12.78□□□□□ -0.36
CDK11B-201ENST00000340677 IGHV3-30P01768 117 aa12.78□□□□□ -0.36
CDK11B-201ENST00000340677 IGHV3-30-5P0DP03 117 aa12.78□□□□□ -0.36
CDK11B-201ENST00000340677 VKORC1L1Q8N0U8 176 aa12.78□□□□□ -0.36
CDK11B-201ENST00000340677 DCANP1Q8TF63 244 aa12.77□□□□□ -0.37
CDK11B-201ENST00000340677 MOB4Q9Y3A3 225 aa12.77□□□□□ -0.37
CDK11B-201ENST00000340677 NBEAQ8NFP9 2946 aa12.76□□□□□ -0.37
CDK11B-201ENST00000340677 LINC00473A8K010 186 aa12.76□□□□□ -0.37
CDK11B-201ENST00000340677 USP17L23D6RBM5 183 aa12.76□□□□□ -0.37
CDK11B-201ENST00000340677 CGB3P0DN86 165 aa12.76□□□□□ -0.37
CDK11B-201ENST00000340677 CGB7P0DN87 165 aa12.76□□□□□ -0.37
CDK11B-201ENST00000340677 C11orf44Q8N8P7 122 aa12.76□□□□□ -0.37
CDK11B-201ENST00000340677 LY6G5BQ8NDX9 201 aa12.76□□□□□ -0.37
CDK11B-201ENST00000340677 LINC00574Q9H8X3 128 aa12.76□□□□□ -0.37
CDK11B-201ENST00000340677 KAAG1Q9UBP8 84 aa12.76□□□□□ -0.37
CDK11B-201ENST00000340677 PRB1P04280 392 aa12.76□□□□□ -0.37
CDK11B-201ENST00000340677 C11orf71Q6IPW1 123 aa12.76□□□□□ -0.37
CDK11B-201ENST00000340677 ASH1LQ9NR48 2969 aaKnown RBP12.75□□□□□ -0.37
CDK11B-201ENST00000340677 TMEM263Q8WUH6 116 aaKnown RBP12.75□□□□□ -0.37
CDK11B-201ENST00000340677 NBASA2RRP1 2371 aa12.75□□□□□ -0.37
CDK11B-201ENST00000340677 TET2Q6N021 2002 aaPredicted RBP12.75□□□□□ -0.37
CDK11B-201ENST00000340677 EIF4EBP1Q13541 118 aaPredicted RBP12.75□□□□□ -0.37
CDK11B-201ENST00000340677 NRACQ8N912 160 aa12.75□□□□□ -0.37
CDK11B-201ENST00000340677 ZNRF1Q8ND25 227 aa12.75□□□□□ -0.37
CDK11B-201ENST00000340677 SMKR1H3BMG3 65 aa12.74□□□□□ -0.37
CDK11B-201ENST00000340677 K7EMT4 169 aa12.74□□□□□ -0.37
CDK11B-201ENST00000340677 RBM3P98179 157 aaKnown RBP12.74□□□□□ -0.37
CDK11B-201ENST00000340677 S1PR3Q99500 378 aa12.74□□□□□ -0.37
CDK11B-201ENST00000340677 H7BZZ5 65 aa12.73□□□□□ -0.37
CDK11B-201ENST00000340677 CCKP06307 115 aa12.73□□□□□ -0.37
CDK11B-201ENST00000340677 ZNF134P52741 427 aa12.73□□□□□ -0.37
CDK11B-201ENST00000340677 Q1RN00 199 aa12.73□□□□□ -0.37
CDK11B-201ENST00000340677 MRPL51Q4U2R6 128 aaKnown RBP12.73□□□□□ -0.37
CDK11B-201ENST00000340677 C6orf223Q8N319 242 aa12.73□□□□□ -0.37
CDK11B-201ENST00000340677 A0A0J9YY99 117 aa12.73□□□□□ -0.37
CDK11B-201ENST00000340677 PLAC8L1A1L4L8 177 aa12.73□□□□□ -0.37
CDK11B-201ENST00000340677 LINC01546A6NGU7 62 aa12.72□□□□□ -0.37
CDK11B-201ENST00000340677 COX6B1P14854 86 aa12.72□□□□□ -0.37
CDK11B-201ENST00000340677 MRPS36P82909 103 aaKnown RBP12.72□□□□□ -0.37
CDK11B-201ENST00000340677 CCL13Q99616 98 aa12.72□□□□□ -0.37
CDK11B-201ENST00000340677 TRBV7-6A0A0J9YX20 115 aa12.72□□□□□ -0.37
CDK11B-201ENST00000340677 PRSS2P07478 247 aa12.72□□□□□ -0.37
CDK11B-201ENST00000340677 HOXD3P31249 432 aaPredicted RBP12.72□□□□□ -0.37
CDK11B-201ENST00000340677 CCL17Q92583 94 aa12.72□□□□□ -0.37
CDK11B-201ENST00000340677 DCTN5Q9BTE1 182 aa12.72□□□□□ -0.37
CDK11B-201ENST00000340677 Q9H3A6 140 aa12.72□□□□□ -0.37
CDK11B-201ENST00000340677 TRIAP1O43715 76 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms