RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 PRSS3P2Q8NHM4 247 aa11.21□□□□□ -0.61
COPS3-201ENST00000268717 KIF25-AS1Q9Y6Z4 181 aa11.21□□□□□ -0.61
COPS3-201ENST00000268717 SMKR1H3BMG3 65 aa11.2□□□□□ -0.62
COPS3-201ENST00000268717 TNFRSF6BO95407 300 aa11.2□□□□□ -0.62
COPS3-201ENST00000268717 NCR2O95944 276 aa11.2□□□□□ -0.62
COPS3-201ENST00000268717 PPP1R17O96001 155 aa11.2□□□□□ -0.62
COPS3-201ENST00000268717 IGLL1P15814 213 aa11.2□□□□□ -0.62
COPS3-201ENST00000268717 ZNF415Q09FC8 603 aa11.2□□□□□ -0.62
COPS3-201ENST00000268717 NDUFAF3Q9BU61 184 aa11.2□□□□□ -0.62
COPS3-201ENST00000268717 NXT2Q9NPJ8 142 aaKnown RBP11.2□□□□□ -0.62
COPS3-201ENST00000268717 IGHV1-24A0A0C4DH33 117 aa11.2□□□□□ -0.62
COPS3-201ENST00000268717 SMIM17P0DL12 118 aa11.2□□□□□ -0.62
COPS3-201ENST00000268717 FAM19A2Q8N3H0 131 aa11.2□□□□□ -0.62
COPS3-201ENST00000268717 C14orf178Q8N769 122 aaPredicted RBP11.2□□□□□ -0.62
COPS3-201ENST00000268717 NRACQ8N912 160 aa11.2□□□□□ -0.62
COPS3-201ENST00000268717 C1QTNF4Q9BXJ3 329 aa11.2□□□□□ -0.62
COPS3-201ENST00000268717 TGP01266 2768 aa11.19□□□□□ -0.62
COPS3-201ENST00000268717 LINC01587Q99440 93 aa11.19□□□□□ -0.62
COPS3-201ENST00000268717 NIT2Q9NQR4 276 aa11.19□□□□□ -0.62
COPS3-201ENST00000268717 IFI27P40305 119 aaPredicted RBP11.18□□□□□ -0.62
COPS3-201ENST00000268717 LINC00315P59091 139 aa11.18□□□□□ -0.62
COPS3-201ENST00000268717 GTSCR1Q86UQ5 136 aa11.18□□□□□ -0.62
COPS3-201ENST00000268717 C20orf78Q9BR46 151 aa11.18□□□□□ -0.62
COPS3-201ENST00000268717 SPXQ9BT56 116 aa11.18□□□□□ -0.62
COPS3-201ENST00000268717 SPRY2O43597 315 aa11.17□□□□□ -0.62
COPS3-201ENST00000268717 C1orf158Q8N1D5 194 aa11.17□□□□□ -0.62
COPS3-201ENST00000268717 XCL2Q9UBD3 114 aa11.17□□□□□ -0.62
COPS3-201ENST00000268717 M0R2P5 195 aa11.17□□□□□ -0.62
COPS3-201ENST00000268717 ZNF876PQ49A33 203 aa11.17□□□□□ -0.62
COPS3-201ENST00000268717 Q8N8P6 123 aa11.17□□□□□ -0.62
COPS3-201ENST00000268717 C11orf72Q8NBR9 251 aa11.17□□□□□ -0.62
COPS3-201ENST00000268717 LOC389332A0A1B0GUA5 103 aa11.16□□□□□ -0.62
COPS3-201ENST00000268717 GAS8-AS1O95177 125 aa11.16□□□□□ -0.62
COPS3-201ENST00000268717 LEPROTL1O95214 131 aa11.16□□□□□ -0.62
COPS3-201ENST00000268717 PRB2P02812 416 aaPredicted RBP11.16□□□□□ -0.62
COPS3-201ENST00000268717 GIG44P09565 113 aaPredicted RBP11.16□□□□□ -0.62
COPS3-201ENST00000268717 RPL32P62910 135 aaKnown RBP11.16□□□□□ -0.62
COPS3-201ENST00000268717 IGLV2-18A0A075B6J9 118 aa11.15□□□□□ -0.62
COPS3-201ENST00000268717 TRAV26-2A0A0B4J265 109 aa11.15□□□□□ -0.62
COPS3-201ENST00000268717 K7EMI3 77 aa11.15□□□□□ -0.62
COPS3-201ENST00000268717 MGPP08493 103 aa11.15□□□□□ -0.62
COPS3-201ENST00000268717 GATA1P15976 413 aaPredicted RBP11.15□□□□□ -0.62
COPS3-201ENST00000268717 RASL10AQ92737 203 aa11.15□□□□□ -0.62
COPS3-201ENST00000268717 TMEM208Q9BTX3 173 aa11.15□□□□□ -0.62
COPS3-201ENST00000268717 WFDC10AQ9H1F0 79 aa11.15□□□□□ -0.62
COPS3-201ENST00000268717 EDA2RQ9HAV5 297 aa11.15□□□□□ -0.62
COPS3-201ENST00000268717 HSPB8Q9UJY1 196 aa11.15□□□□□ -0.62
COPS3-201ENST00000268717 GOLT1BQ9Y3E0 138 aa11.15□□□□□ -0.62
COPS3-201ENST00000268717 MUC4Q99102 2169 aa11.15□□□□□ -0.62
COPS3-201ENST00000268717 CRYGDP07320 174 aa11.14□□□□□ -0.63
COPS3-201ENST00000268717 C3orf79P0CE67 100 aa11.14□□□□□ -0.63
COPS3-201ENST00000268717 IL17DQ8TAD2 202 aa11.14□□□□□ -0.63
COPS3-201ENST00000268717 A8MWV9 139 aa11.13□□□□□ -0.63
COPS3-201ENST00000268717 SCGB1D1O95968 90 aa11.13□□□□□ -0.63
COPS3-201ENST00000268717 KRTDAPP60985 99 aa11.13□□□□□ -0.63
COPS3-201ENST00000268717 SUMO2P61956 95 aaKnown RBP11.13□□□□□ -0.63
COPS3-201ENST00000268717 SMIM2Q9BVW6 85 aa11.13□□□□□ -0.63
COPS3-201ENST00000268717 A0A096LNJ9 63 aa11.13□□□□□ -0.63
COPS3-201ENST00000268717 HBDP02042 147 aa11.13□□□□□ -0.63
COPS3-201ENST00000268717 HTN1P15515 57 aa11.13□□□□□ -0.63
COPS3-201ENST00000268717 BTF3P20290 206 aaKnown RBP11.13□□□□□ -0.63
COPS3-201ENST00000268717 S100A12P80511 92 aa11.13□□□□□ -0.63
COPS3-201ENST00000268717 CSNK1G2-AS1Q8NCQ2 148 aa11.13□□□□□ -0.63
COPS3-201ENST00000268717 RNASE8Q8TDE3 154 aaKnown RBP11.13□□□□□ -0.63
COPS3-201ENST00000268717 TMEM263Q8WUH6 116 aaKnown RBP11.13□□□□□ -0.63
COPS3-201ENST00000268717 JPT2Q9H910 190 aa11.13□□□□□ -0.63
COPS3-201ENST00000268717 TRBV6-5A0A0K0K1A5 114 aa11.12□□□□□ -0.63
COPS3-201ENST00000268717 EGFEM1PQ0D2K5 195 aa11.12□□□□□ -0.63
COPS3-201ENST00000268717 PMCHL1Q16048 86 aa11.12□□□□□ -0.63
COPS3-201ENST00000268717 SUMO4Q6EEV6 95 aa11.12□□□□□ -0.63
COPS3-201ENST00000268717 CDPF1Q6NVV7 123 aa11.12□□□□□ -0.63
COPS3-201ENST00000268717 TMEM70Q9BUB7 260 aa11.12□□□□□ -0.63
COPS3-201ENST00000268717 A0A087WWL8 130 aa11.11□□□□□ -0.63
COPS3-201ENST00000268717 KRTAP10-11P60412 298 aa11.11□□□□□ -0.63
COPS3-201ENST00000268717 ZNF705AQ6ZN79 300 aaPredicted RBP11.11□□□□□ -0.63
COPS3-201ENST00000268717 TEX43Q6ZNM6 134 aa11.11□□□□□ -0.63
COPS3-201ENST00000268717 Q8N976 141 aa11.11□□□□□ -0.63
COPS3-201ENST00000268717 RHODO00212 210 aa11.1□□□□□ -0.63
COPS3-201ENST00000268717 RPL35AP18077 110 aaKnown RBP11.1□□□□□ -0.63
COPS3-201ENST00000268717 FCER1GP30273 86 aa11.1□□□□□ -0.63
COPS3-201ENST00000268717 UFSP1Q6NVU6 142 aa11.1□□□□□ -0.63
COPS3-201ENST00000268717 C16orf74Q96GX8 76 aa11.1□□□□□ -0.63
COPS3-201ENST00000268717 CSTL1Q9H114 145 aa11.1□□□□□ -0.63
COPS3-201ENST00000268717 PRM2P04554 102 aa11.09□□□□□ -0.63
COPS3-201ENST00000268717 LAGE3Q14657 143 aa11.09□□□□□ -0.63
COPS3-201ENST00000268717 SPATA12Q7Z6I5 190 aa11.09□□□□□ -0.63
COPS3-201ENST00000268717 RPL39LQ96EH5 51 aaKnown RBP11.09□□□□□ -0.63
COPS3-201ENST00000268717 MAP1LC3CQ9BXW4 147 aa11.09□□□□□ -0.63
COPS3-201ENST00000268717 H7C1H1 209 aa11.09□□□□□ -0.63
COPS3-201ENST00000268717 M0QY20 66 aa11.09□□□□□ -0.63
COPS3-201ENST00000268717 AZU1P20160 251 aa11.09□□□□□ -0.63
COPS3-201ENST00000268717 DAZ2Q13117 558 aaKnown RBP11.09□□□□□ -0.63
COPS3-201ENST00000268717 ZNF56Q15929 161 aa11.09□□□□□ -0.63
COPS3-201ENST00000268717 LGALS9BQ3B8N2 356 aa11.09□□□□□ -0.63
COPS3-201ENST00000268717 ORMDL2Q53FV1 153 aa11.09□□□□□ -0.63
COPS3-201ENST00000268717 FAM74A4Q5TZK3 123 aa11.09□□□□□ -0.63
COPS3-201ENST00000268717 PET117Q6UWS5 81 aa11.09□□□□□ -0.63
COPS3-201ENST00000268717 MRAPQ8TCY5 172 aa11.09□□□□□ -0.63
COPS3-201ENST00000268717 ST20Q9HBF5 79 aa11.09□□□□□ -0.63
COPS3-201ENST00000268717 KIR2DL5BA0A0G2JN68 375 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms