RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 SHANK2-AS3Q9BTD1 123 aa6.7□□□□□ -1.34
VAPB-201ENST00000265619 RNF7Q9UBF6 113 aa6.7□□□□□ -1.34
VAPB-201ENST00000265619 SETD2Q9BYW2 2564 aaPredicted RBP6.7□□□□□ -1.34
VAPB-201ENST00000265619 HERVK_113P63121 156 aa6.7□□□□□ -1.34
VAPB-201ENST00000265619 GAFA1Q96PS6 74 aa6.7□□□□□ -1.34
VAPB-201ENST00000265619 PRO1854Q9UHT4 67 aa6.7□□□□□ -1.34
VAPB-201ENST00000265619 NAV2Q8IVL1 2488 aa6.69□□□□□ -1.34
VAPB-201ENST00000265619 TRGV11A0A075B6L2 103 aa6.69□□□□□ -1.34
VAPB-201ENST00000265619 E7EQL1 145 aa6.69□□□□□ -1.34
VAPB-201ENST00000265619 H3BRN7 92 aa6.69□□□□□ -1.34
VAPB-201ENST00000265619 LGALS9O00182 355 aa6.69□□□□□ -1.34
VAPB-201ENST00000265619 TMEM126AQ9H061 195 aa6.69□□□□□ -1.34
VAPB-201ENST00000265619 PRAC2D3DTV9 90 aa6.69□□□□□ -1.34
VAPB-201ENST00000265619 NPFFO15130 113 aa6.69□□□□□ -1.34
VAPB-201ENST00000265619 CRYGDP07320 174 aa6.69□□□□□ -1.34
VAPB-201ENST00000265619 Q6ZSV7 163 aa6.69□□□□□ -1.34
VAPB-201ENST00000265619 POM121L12Q8N7R1 296 aa6.69□□□□□ -1.34
VAPB-201ENST00000265619 TMEM101Q96IK0 257 aa6.69□□□□□ -1.34
VAPB-201ENST00000265619 SCGB3A1Q96QR1 104 aa6.69□□□□□ -1.34
VAPB-201ENST00000265619 C11orf86A6NJI1 115 aa6.69□□□□□ -1.34
VAPB-201ENST00000265619 LHBP01229 141 aa6.69□□□□□ -1.34
VAPB-201ENST00000265619 IGHV3-33P01772 117 aa6.69□□□□□ -1.34
VAPB-201ENST00000265619 TIRAPP58753 221 aa6.69□□□□□ -1.34
VAPB-201ENST00000265619 ADORA2A-AS1P86434 159 aa6.69□□□□□ -1.34
VAPB-201ENST00000265619 LINC01620Q4KN68 170 aa6.69□□□□□ -1.34
VAPB-201ENST00000265619 IL17RELQ6ZVW7 336 aa6.69□□□□□ -1.34
VAPB-201ENST00000265619 OR4C13Q8NGP0 309 aa6.69□□□□□ -1.34
VAPB-201ENST00000265619 LYPD2Q6UXB3 125 aa6.68□□□□□ -1.34
VAPB-201ENST00000265619 ZNF491Q8N8L2 437 aa6.68□□□□□ -1.34
VAPB-201ENST00000265619 RPL39LQ96EH5 51 aaKnown RBP6.68□□□□□ -1.34
VAPB-201ENST00000265619 IGKV3D-20A0A0C4DH25 116 aa6.68□□□□□ -1.34
VAPB-201ENST00000265619 C17orf100A8MU93 164 aa6.68□□□□□ -1.34
VAPB-201ENST00000265619 PVRIGQ6DKI7 326 aa6.68□□□□□ -1.34
VAPB-201ENST00000265619 CNFNQ9BYD5 112 aa6.68□□□□□ -1.34
VAPB-201ENST00000265619 TRAV12-1A0A0B4J245 112 aa6.68□□□□□ -1.34
VAPB-201ENST00000265619 I3L2K1 104 aa6.68□□□□□ -1.34
VAPB-201ENST00000265619 OXTP01178 125 aa6.68□□□□□ -1.34
VAPB-201ENST00000265619 TMEM263Q8WUH6 116 aaKnown RBP6.68□□□□□ -1.34
VAPB-201ENST00000265619 AMELXQ99217 191 aa6.68□□□□□ -1.34
VAPB-201ENST00000265619 TEX22C9J3V5 150 aa6.67□□□□□ -1.34
VAPB-201ENST00000265619 J3QLI3 93 aa6.67□□□□□ -1.34
VAPB-201ENST00000265619 NDUFA7O95182 113 aa6.67□□□□□ -1.34
VAPB-201ENST00000265619 PLGLAQ15195 96 aa6.67□□□□□ -1.34
VAPB-201ENST00000265619 C9orf153Q5TBE3 101 aa6.67□□□□□ -1.34
VAPB-201ENST00000265619 CELSR1Q9NYQ6 3014 aa6.67□□□□□ -1.34
VAPB-201ENST00000265619 DOPEY1Q5JWR5 2465 aa6.67□□□□□ -1.34
VAPB-201ENST00000265619 IGLV4-69A0A075B6H9 119 aa6.67□□□□□ -1.34
VAPB-201ENST00000265619 IGHV3-35A0A0C4DH35 117 aa6.67□□□□□ -1.34
VAPB-201ENST00000265619 TSHBP01222 138 aa6.67□□□□□ -1.34
VAPB-201ENST00000265619 COX7A1P24310 79 aa6.67□□□□□ -1.34
VAPB-201ENST00000265619 KIR2DL5BQ8NHK3 375 aa6.67□□□□□ -1.34
VAPB-201ENST00000265619 SMCR5Q8TEV8 140 aa6.67□□□□□ -1.34
VAPB-201ENST00000265619 H3BMM0 161 aa6.67□□□□□ -1.34
VAPB-201ENST00000265619 M0R2P5 195 aa6.67□□□□□ -1.34
VAPB-201ENST00000265619 EBI3Q14213 229 aa6.67□□□□□ -1.34
VAPB-201ENST00000265619 LYRM7Q5U5X0 104 aa6.67□□□□□ -1.34
VAPB-201ENST00000265619 DYNAPQ8N1N2 210 aa6.67□□□□□ -1.34
VAPB-201ENST00000265619 RNASE6Q93091 150 aaKnown RBP6.67□□□□□ -1.34
VAPB-201ENST00000265619 EEF1AKMT3Q96AZ1 226 aa6.67□□□□□ -1.34
VAPB-201ENST00000265619 UBE2WQ96B02 151 aa6.67□□□□□ -1.34
VAPB-201ENST00000265619 TIMD4Q96H15 378 aa6.67□□□□□ -1.34
VAPB-201ENST00000265619 RNF223E7ERA6 249 aa6.66□□□□□ -1.34
VAPB-201ENST00000265619 RPL27AP46776 148 aaKnown RBP6.66□□□□□ -1.34
VAPB-201ENST00000265619 ZNF580Q9UK33 172 aa6.66□□□□□ -1.34
VAPB-201ENST00000265619 ANKRD17O75179 2603 aaKnown RBP6.66□□□□□ -1.34
VAPB-201ENST00000265619 H7C423 109 aa6.66□□□□□ -1.34
VAPB-201ENST00000265619 TRIAP1O43715 76 aa6.66□□□□□ -1.34
VAPB-201ENST00000265619 RPL13AP40429 203 aaKnown RBP6.66□□□□□ -1.34
VAPB-201ENST00000265619 RNF182Q8N6D2 247 aa6.66□□□□□ -1.34
VAPB-201ENST00000265619 TOMM6Q96B49 74 aa6.66□□□□□ -1.34
VAPB-201ENST00000265619 PMVKQ15126 192 aa6.65□□□□□ -1.34
VAPB-201ENST00000265619 C4orf26Q17RF5 130 aa6.65□□□□□ -1.34
VAPB-201ENST00000265619 SLC25A29Q8N8R3 303 aa6.65□□□□□ -1.34
VAPB-201ENST00000265619 SMAD5-AS1Q9Y6J3 95 aa6.65□□□□□ -1.34
VAPB-201ENST00000265619 CREBBPQ92793 2442 aa6.65□□□□□ -1.34
VAPB-201ENST00000265619 IGHV7-4-1A0A0J9YVY3 117 aa6.65□□□□□ -1.34
VAPB-201ENST00000265619 IGHV3-23P01764 117 aa6.65□□□□□ -1.34
VAPB-201ENST00000265619 CLEC2BQ92478 149 aa6.65□□□□□ -1.34
VAPB-201ENST00000265619 IGHV3-64A0A075B6Q5 118 aa6.65□□□□□ -1.35
VAPB-201ENST00000265619 TRAV41A0A0B4J266 112 aa6.65□□□□□ -1.35
VAPB-201ENST00000265619 K7EIM0 57 aa6.65□□□□□ -1.35
VAPB-201ENST00000265619 ZNF561-AS1K7EIQ3 104 aa6.65□□□□□ -1.35
VAPB-201ENST00000265619 CRYGBP07316 175 aa6.65□□□□□ -1.35
VAPB-201ENST00000265619 C2orf66Q6UXQ4 117 aa6.65□□□□□ -1.35
VAPB-201ENST00000265619 SMIM2Q9BVW6 85 aa6.65□□□□□ -1.35
VAPB-201ENST00000265619 MUSTN1Q8IVN3 82 aa6.64□□□□□ -1.35
VAPB-201ENST00000265619 C3orf22Q8N5N4 141 aa6.64□□□□□ -1.35
VAPB-201ENST00000265619 LINC00574Q9H8X3 128 aa6.64□□□□□ -1.35
VAPB-201ENST00000265619 LINC00527Q9UJ94 153 aa6.64□□□□□ -1.35
VAPB-201ENST00000265619 CELSR2Q9HCU4 2923 aa6.64□□□□□ -1.35
VAPB-201ENST00000265619 IGLV3-9A0A075B6K5 115 aa6.64□□□□□ -1.35
VAPB-201ENST00000265619 C19orf84I3L1E1 186 aa6.64□□□□□ -1.35
VAPB-201ENST00000265619 NDUFB3O43676 98 aa6.64□□□□□ -1.35
VAPB-201ENST00000265619 Q1RN00 199 aa6.64□□□□□ -1.35
VAPB-201ENST00000265619 LINC01559Q495D7 138 aa6.64□□□□□ -1.35
VAPB-201ENST00000265619 C2orf82Q6UX34 121 aa6.64□□□□□ -1.35
VAPB-201ENST00000265619 LYPD1Q8N2G4 141 aa6.64□□□□□ -1.35
VAPB-201ENST00000265619 ZNRF2Q8NHG8 242 aa6.64□□□□□ -1.35
VAPB-201ENST00000265619 SIGLEC9Q9Y336 463 aa6.64□□□□□ -1.35
VAPB-201ENST00000265619 TRBV7-7A0A0K0K1E9 115 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms