RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 PYGO1Q9Y3Y4 419 aa9.86□□□□□ -0.83
VAMP4-201ENST00000236192 TRBV12-3P01733 135 aa9.86□□□□□ -0.83
VAMP4-201ENST00000236192 ATG2AQ2TAZ0 1938 aa9.86□□□□□ -0.83
VAMP4-201ENST00000236192 WT1P19544 449 aaPredicted RBP9.86□□□□□ -0.83
VAMP4-201ENST00000236192 TMEM131Q92545 1883 aa9.86□□□□□ -0.83
VAMP4-201ENST00000236192 C6orf226Q5I0X4 101 aa9.86□□□□□ -0.83
VAMP4-201ENST00000236192 SDK2Q58EX2 2172 aa9.85□□□□□ -0.83
VAMP4-201ENST00000236192 IGHV1OR15-1A0A075B7D0 117 aa9.85□□□□□ -0.83
VAMP4-201ENST00000236192 IGHG3P01860 377 aa9.85□□□□□ -0.83
VAMP4-201ENST00000236192 LECT2O14960 151 aa9.85□□□□□ -0.83
VAMP4-201ENST00000236192 HIST2H2BCQ6DN03 193 aa9.85□□□□□ -0.83
VAMP4-201ENST00000236192 HIST2H2BDQ6DRA6 164 aa9.85□□□□□ -0.83
VAMP4-201ENST00000236192 IGF2-ASQ6U949 168 aa9.85□□□□□ -0.83
VAMP4-201ENST00000236192 ENHOQ6UWT2 76 aa9.85□□□□□ -0.83
VAMP4-201ENST00000236192 TEX22C9J3V5 150 aa9.85□□□□□ -0.83
VAMP4-201ENST00000236192 FAM27E3Q08E93 113 aa9.85□□□□□ -0.83
VAMP4-201ENST00000236192 FHL3Q13643 280 aa9.85□□□□□ -0.83
VAMP4-201ENST00000236192 PRAC2D3DTV9 90 aa9.84□□□□□ -0.83
VAMP4-201ENST00000236192 SPRNQ5BIV9 151 aa9.84□□□□□ -0.83
VAMP4-201ENST00000236192 NXPH4O95158 308 aa9.84□□□□□ -0.83
VAMP4-201ENST00000236192 LYPD2Q6UXB3 125 aa9.84□□□□□ -0.83
VAMP4-201ENST00000236192 FAM110DQ8TAY7 271 aaPredicted RBP9.84□□□□□ -0.83
VAMP4-201ENST00000236192 SND1-IT1Q9HBX3 110 aa9.84□□□□□ -0.83
VAMP4-201ENST00000236192 A0A0G2JNJ9 132 aa9.84□□□□□ -0.83
VAMP4-201ENST00000236192 NBL1P41271 181 aa9.84□□□□□ -0.83
VAMP4-201ENST00000236192 C9orf47Q6ZRZ4 202 aa9.84□□□□□ -0.83
VAMP4-201ENST00000236192 ZNF71Q9NQZ8 489 aaPredicted RBP9.84□□□□□ -0.83
VAMP4-201ENST00000236192 Q9UFV3 132 aa9.84□□□□□ -0.83
VAMP4-201ENST00000236192 IGHV3-11P01762 117 aa9.83□□□□□ -0.84
VAMP4-201ENST00000236192 BSPH1Q075Z2 132 aa9.83□□□□□ -0.84
VAMP4-201ENST00000236192 ELANEP08246 267 aa9.83□□□□□ -0.84
VAMP4-201ENST00000236192 LOXP28300 417 aaPredicted RBP9.83□□□□□ -0.84
VAMP4-201ENST00000236192 BLCAPP62952 87 aa9.83□□□□□ -0.84
VAMP4-201ENST00000236192 A0A0J9YX75 114 aa9.83□□□□□ -0.84
VAMP4-201ENST00000236192 GAS8-AS1O95177 125 aa9.82□□□□□ -0.84
VAMP4-201ENST00000236192 FUSP35637 526 aaKnown RBP eCLIP9.82□□□□□ -0.84
VAMP4-201ENST00000236192 C20orf203Q8NBC4 194 aa9.82□□□□□ -0.84
VAMP4-201ENST00000236192 CNFNQ9BYD5 112 aa9.82□□□□□ -0.84
VAMP4-201ENST00000236192 PI4KAP42356 2102 aa9.82□□□□□ -0.84
VAMP4-201ENST00000236192 OPRPNQ99935 248 aaPredicted RBP9.82□□□□□ -0.84
VAMP4-201ENST00000236192 RITA1Q96K30 269 aa9.81□□□□□ -0.84
VAMP4-201ENST00000236192 FAM223BA6NKX1 122 aa9.81□□□□□ -0.84
VAMP4-201ENST00000236192 LHBP01229 141 aa9.81□□□□□ -0.84
VAMP4-201ENST00000236192 FAM223AQ8IWN6 122 aa9.81□□□□□ -0.84
VAMP4-201ENST00000236192 TMEM256-PLSCR3K7ERE1 68 aa9.81□□□□□ -0.84
VAMP4-201ENST00000236192 TANC2Q9HCD6 1990 aa9.81□□□□□ -0.84
VAMP4-201ENST00000236192 USF3Q68DE3 2245 aa9.81□□□□□ -0.84
VAMP4-201ENST00000236192 C1orf229Q6ZS94 237 aaPredicted RBP9.81□□□□□ -0.84
VAMP4-201ENST00000236192 NCOA6Q14686 2063 aaPredicted RBP9.81□□□□□ -0.84
VAMP4-201ENST00000236192 FAM186AA6NE01 2351 aa9.8□□□□□ -0.84
VAMP4-201ENST00000236192 CEMP1Q6PRD7 247 aaPredicted RBP9.8□□□□□ -0.84
VAMP4-201ENST00000236192 CCL21O00585 134 aa9.8□□□□□ -0.84
VAMP4-201ENST00000236192 SNURFQ9Y675 71 aa9.8□□□□□ -0.84
VAMP4-201ENST00000236192 RHPN1-AS1Q9BWJ2 59 aa9.79□□□□□ -0.84
VAMP4-201ENST00000236192 INTS1Q8N201 2190 aaKnown RBP9.79□□□□□ -0.84
VAMP4-201ENST00000236192 LINC01546A6NGU7 62 aa9.79□□□□□ -0.84
VAMP4-201ENST00000236192 F8WEM9 126 aa9.79□□□□□ -0.84
VAMP4-201ENST00000236192 MINOS1Q5TGZ0 78 aa9.79□□□□□ -0.84
VAMP4-201ENST00000236192 MINOS1-NBL1R4GNA1 71 aa9.79□□□□□ -0.84
VAMP4-201ENST00000236192 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.78□□□□□ -0.84
VAMP4-201ENST00000236192 IGKV2-29A2NJV5 120 aaPredicted RBP9.78□□□□□ -0.84
VAMP4-201ENST00000236192 RNASE6Q93091 150 aaKnown RBP9.78□□□□□ -0.84
VAMP4-201ENST00000236192 IGLV1-44P01699 117 aa9.78□□□□□ -0.84
VAMP4-201ENST00000236192 PIK3CD-AS1Q5SR53 167 aa9.78□□□□□ -0.84
VAMP4-201ENST00000236192 ARRDC1-AS1Q9H2J1 176 aa9.78□□□□□ -0.84
VAMP4-201ENST00000236192 PIP4P2Q8N4L2 257 aa9.78□□□□□ -0.84
VAMP4-201ENST00000236192 LINC00308Q8TCZ7 52 aa9.78□□□□□ -0.84
VAMP4-201ENST00000236192 KLK9Q9UKQ9 250 aa9.78□□□□□ -0.84
VAMP4-201ENST00000236192 XCL1P47992 114 aa9.77□□□□□ -0.84
VAMP4-201ENST00000236192 XCL2Q9UBD3 114 aa9.77□□□□□ -0.84
VAMP4-201ENST00000236192 IGLV11-55A0A075B6I3 123 aa9.77□□□□□ -0.85
VAMP4-201ENST00000236192 TRAV7A0A075B6U4 112 aa9.77□□□□□ -0.85
VAMP4-201ENST00000236192 PMAIP1Q13794 54 aa9.77□□□□□ -0.85
VAMP4-201ENST00000236192 VMO1Q7Z5L0 202 aa9.77□□□□□ -0.85
VAMP4-201ENST00000236192 C9orf85Q96MD7 179 aa9.77□□□□□ -0.85
VAMP4-201ENST00000236192 IGHV3-38A0A0C4DH36 116 aa9.77□□□□□ -0.85
VAMP4-201ENST00000236192 LINC01548A6NM66 108 aa9.77□□□□□ -0.85
VAMP4-201ENST00000236192 BRI3O95415 125 aa9.77□□□□□ -0.85
VAMP4-201ENST00000236192 ZNF407Q9C0G0 2248 aa9.77□□□□□ -0.85
VAMP4-201ENST00000236192 PATE3B3GLJ2 98 aa9.77□□□□□ -0.85
VAMP4-201ENST00000236192 PRB1P04280 392 aa9.77□□□□□ -0.85
VAMP4-201ENST00000236192 A0A087WVE0 104 aa9.76□□□□□ -0.85
VAMP4-201ENST00000236192 HOXB4P17483 251 aaPredicted RBP9.76□□□□□ -0.85
VAMP4-201ENST00000236192 LY6EQ16553 131 aa9.76□□□□□ -0.85
VAMP4-201ENST00000236192 FAM222AQ5U5X8 452 aa9.76□□□□□ -0.85
VAMP4-201ENST00000236192 H3BQ85 93 aa9.76□□□□□ -0.85
VAMP4-201ENST00000236192 CTSGP08311 255 aa9.76□□□□□ -0.85
VAMP4-201ENST00000236192 ATP1A1-AS1Q5TC04 95 aa9.76□□□□□ -0.85
VAMP4-201ENST00000236192 NCR3O14931 201 aa9.76□□□□□ -0.85
VAMP4-201ENST00000236192 CGB3P0DN86 165 aa9.75□□□□□ -0.85
VAMP4-201ENST00000236192 CGB7P0DN87 165 aa9.75□□□□□ -0.85
VAMP4-201ENST00000236192 EBI3Q14213 229 aa9.75□□□□□ -0.85
VAMP4-201ENST00000236192 SPTSSBQ8NFR3 76 aa9.75□□□□□ -0.85
VAMP4-201ENST00000236192 FER1L5A0AVI2 2057 aa9.75□□□□□ -0.85
VAMP4-201ENST00000236192 WFDC9Q8NEX5 89 aa9.75□□□□□ -0.85
VAMP4-201ENST00000236192 PIP4P1Q86T03 277 aa9.75□□□□□ -0.85
VAMP4-201ENST00000236192 DSCAML1Q8TD84 2053 aa9.74□□□□□ -0.85
VAMP4-201ENST00000236192 IGLV2-18A0A075B6J9 118 aa9.74□□□□□ -0.85
VAMP4-201ENST00000236192 TRGV2A0A075B6R0 118 aa9.74□□□□□ -0.85
VAMP4-201ENST00000236192 PDE6GP18545 87 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms