RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 Q8N976 141 aa11.36□□□□□ -0.59
LAPTM4A-201ENST00000175091 RASL10AQ92737 203 aa11.36□□□□□ -0.59
LAPTM4A-201ENST00000175091 LEPROTL1O95214 131 aa11.36□□□□□ -0.59
LAPTM4A-201ENST00000175091 PRM2P04554 102 aa11.36□□□□□ -0.59
LAPTM4A-201ENST00000175091 ZNF876PQ49A33 203 aa11.36□□□□□ -0.59
LAPTM4A-201ENST00000175091 A0A087WWL8 130 aa11.35□□□□□ -0.59
LAPTM4A-201ENST00000175091 Q8N8P6 123 aa11.35□□□□□ -0.59
LAPTM4A-201ENST00000175091 NOTCH3Q9UM47 2321 aa11.34□□□□□ -0.59
LAPTM4A-201ENST00000175091 PIK3CD-AS1Q5SR53 167 aa11.34□□□□□ -0.59
LAPTM4A-201ENST00000175091 PTH2Q96A98 100 aa11.34□□□□□ -0.59
LAPTM4A-201ENST00000175091 TMEM208Q9BTX3 173 aa11.34□□□□□ -0.59
LAPTM4A-201ENST00000175091 FBN1P35555 2871 aaKnown RBP11.34□□□□□ -0.59
LAPTM4A-201ENST00000175091 MAST4O15021 2626 aa11.34□□□□□ -0.59
LAPTM4A-201ENST00000175091 CRYGDP07320 174 aa11.33□□□□□ -0.59
LAPTM4A-201ENST00000175091 RPL35AP18077 110 aaKnown RBP11.33□□□□□ -0.59
LAPTM4A-201ENST00000175091 SUMO4Q6EEV6 95 aa11.33□□□□□ -0.59
LAPTM4A-201ENST00000175091 MORN3Q6PF18 240 aaPredicted RBP11.33□□□□□ -0.59
LAPTM4A-201ENST00000175091 LINC00173Q6ZV60 143 aa11.33□□□□□ -0.59
LAPTM4A-201ENST00000175091 GTSCR1Q86UQ5 136 aa11.33□□□□□ -0.59
LAPTM4A-201ENST00000175091 WFDC9Q8NEX5 89 aa11.33□□□□□ -0.59
LAPTM4A-201ENST00000175091 RPL39LQ96EH5 51 aaKnown RBP11.33□□□□□ -0.59
LAPTM4A-201ENST00000175091 C20orf78Q9BR46 151 aa11.33□□□□□ -0.59
LAPTM4A-201ENST00000175091 MCRIP2Q9BUT9 160 aaKnown RBP11.33□□□□□ -0.59
LAPTM4A-201ENST00000175091 SMIM2Q9BVW6 85 aa11.33□□□□□ -0.59
LAPTM4A-201ENST00000175091 NACAE9PAV3 2078 aa11.33□□□□□ -0.59
LAPTM4A-201ENST00000175091 M0R2P5 195 aa11.33□□□□□ -0.6
LAPTM4A-201ENST00000175091 HBDP02042 147 aa11.33□□□□□ -0.6
LAPTM4A-201ENST00000175091 BTF3P20290 206 aaKnown RBP11.33□□□□□ -0.6
LAPTM4A-201ENST00000175091 SUMO2P61956 95 aaKnown RBP11.33□□□□□ -0.6
LAPTM4A-201ENST00000175091 FAM74A4Q5TZK3 123 aa11.33□□□□□ -0.6
LAPTM4A-201ENST00000175091 TEX43Q6ZNM6 134 aa11.33□□□□□ -0.6
LAPTM4A-201ENST00000175091 IL17DQ8TAD2 202 aa11.33□□□□□ -0.6
LAPTM4A-201ENST00000175091 C1QTNF4Q9BXJ3 329 aa11.33□□□□□ -0.6
LAPTM4A-201ENST00000175091 PCP4L1A6NKN8 68 aa11.32□□□□□ -0.6
LAPTM4A-201ENST00000175091 WIPF1O43516 503 aa11.32□□□□□ -0.6
LAPTM4A-201ENST00000175091 PPP1R17O96001 155 aa11.32□□□□□ -0.6
LAPTM4A-201ENST00000175091 RNASE8Q8TDE3 154 aaKnown RBP11.32□□□□□ -0.6
LAPTM4A-201ENST00000175091 SPXQ9BT56 116 aa11.32□□□□□ -0.6
LAPTM4A-201ENST00000175091 TMEM70Q9BUB7 260 aa11.32□□□□□ -0.6
LAPTM4A-201ENST00000175091 ZNF747Q9BV97 191 aa11.32□□□□□ -0.6
LAPTM4A-201ENST00000175091 HSPB8Q9UJY1 196 aa11.32□□□□□ -0.6
LAPTM4A-201ENST00000175091 IGHV3OR16-12A0A075B7B8 117 aa11.31□□□□□ -0.6
LAPTM4A-201ENST00000175091 S100A12P80511 92 aa11.31□□□□□ -0.6
LAPTM4A-201ENST00000175091 CSNK1G2-AS1Q8NCQ2 148 aa11.31□□□□□ -0.6
LAPTM4A-201ENST00000175091 AZU1P20160 251 aa11.31□□□□□ -0.6
LAPTM4A-201ENST00000175091 PRIMA1Q86XR5 153 aa11.31□□□□□ -0.6
LAPTM4A-201ENST00000175091 TMEM263Q8WUH6 116 aaKnown RBP11.31□□□□□ -0.6
LAPTM4A-201ENST00000175091 SYS1-DBNDD2H3BUS1 97 aa11.3□□□□□ -0.6
LAPTM4A-201ENST00000175091 ZNF56Q15929 161 aa11.3□□□□□ -0.6
LAPTM4A-201ENST00000175091 GOLT1BQ9Y3E0 138 aa11.3□□□□□ -0.6
LAPTM4A-201ENST00000175091 A8MWV9 139 aa11.29□□□□□ -0.6
LAPTM4A-201ENST00000175091 F5H697 171 aa11.29□□□□□ -0.6
LAPTM4A-201ENST00000175091 SPATA12Q7Z6I5 190 aa11.29□□□□□ -0.6
LAPTM4A-201ENST00000175091 NDUFAF3Q9BU61 184 aa11.29□□□□□ -0.6
LAPTM4A-201ENST00000175091 M0QY20 66 aa11.28□□□□□ -0.6
LAPTM4A-201ENST00000175091 IGLL1P15814 213 aa11.28□□□□□ -0.6
LAPTM4A-201ENST00000175091 FCER1GP30273 86 aa11.28□□□□□ -0.6
LAPTM4A-201ENST00000175091 RPL32P62910 135 aaKnown RBP11.28□□□□□ -0.6
LAPTM4A-201ENST00000175091 UFSP1Q6NVU6 142 aa11.28□□□□□ -0.6
LAPTM4A-201ENST00000175091 ZNF705AQ6ZN79 300 aaPredicted RBP11.28□□□□□ -0.6
LAPTM4A-201ENST00000175091 MAP1LC3CQ9BXW4 147 aa11.28□□□□□ -0.6
LAPTM4A-201ENST00000175091 EDA2RQ9HAV5 297 aa11.28□□□□□ -0.6
LAPTM4A-201ENST00000175091 STAB1Q9NY15 2570 aa11.28□□□□□ -0.6
LAPTM4A-201ENST00000175091 LAGE3Q14657 143 aa11.28□□□□□ -0.6
LAPTM4A-201ENST00000175091 ZNF664Q8N3J9 261 aa11.28□□□□□ -0.6
LAPTM4A-201ENST00000175091 TRBV6-5A0A0K0K1A5 114 aa11.27□□□□□ -0.61
LAPTM4A-201ENST00000175091 K7EMI3 77 aa11.27□□□□□ -0.61
LAPTM4A-201ENST00000175091 TCAPO15273 167 aa11.27□□□□□ -0.61
LAPTM4A-201ENST00000175091 MRPL16Q9NX20 251 aaKnown RBP11.27□□□□□ -0.61
LAPTM4A-201ENST00000175091 PKIAP61925 76 aa11.26□□□□□ -0.61
LAPTM4A-201ENST00000175091 CFAP126Q5VTH2 177 aa11.26□□□□□ -0.61
LAPTM4A-201ENST00000175091 PET117Q6UWS5 81 aa11.26□□□□□ -0.61
LAPTM4A-201ENST00000175091 TMEM158Q8WZ71 300 aa11.26□□□□□ -0.61
LAPTM4A-201ENST00000175091 ST20Q9HBF5 79 aa11.26□□□□□ -0.61
LAPTM4A-201ENST00000175091 KIR2DL5BA0A0G2JN68 375 aa11.26□□□□□ -0.61
LAPTM4A-201ENST00000175091 KIR2DL5BA0A0G2JPC4 375 aa11.26□□□□□ -0.61
LAPTM4A-201ENST00000175091 POLR2KP53803 58 aaKnown RBP11.26□□□□□ -0.61
LAPTM4A-201ENST00000175091 KIR2DL5AQ8N109 375 aa11.26□□□□□ -0.61
LAPTM4A-201ENST00000175091 C16orf74Q96GX8 76 aa11.26□□□□□ -0.61
LAPTM4A-201ENST00000175091 CSTL1Q9H114 145 aa11.26□□□□□ -0.61
LAPTM4A-201ENST00000175091 CMYA5Q8N3K9 4069 aa11.25□□□□□ -0.61
LAPTM4A-201ENST00000175091 PLAC8L1A1L4L8 177 aa11.25□□□□□ -0.61
LAPTM4A-201ENST00000175091 TSTD3H0UI37 97 aa11.25□□□□□ -0.61
LAPTM4A-201ENST00000175091 RHODO00212 210 aa11.25□□□□□ -0.61
LAPTM4A-201ENST00000175091 ORMDL2Q53FV1 153 aa11.25□□□□□ -0.61
LAPTM4A-201ENST00000175091 SHISA2Q6UWI4 295 aa11.25□□□□□ -0.61
LAPTM4A-201ENST00000175091 C3orf56Q8N813 242 aa11.25□□□□□ -0.61
LAPTM4A-201ENST00000175091 VAMP8Q9BV40 100 aa11.25□□□□□ -0.61
LAPTM4A-201ENST00000175091 C20orf202A1L168 122 aa11.24□□□□□ -0.61
LAPTM4A-201ENST00000175091 SDHAF1A6NFY7 115 aa11.24□□□□□ -0.61
LAPTM4A-201ENST00000175091 RS1O15537 224 aa11.24□□□□□ -0.61
LAPTM4A-201ENST00000175091 PRO1933Q9H354 126 aa11.24□□□□□ -0.61
LAPTM4A-201ENST00000175091 TRBV27A0A0K0K1C4 114 aa11.23□□□□□ -0.61
LAPTM4A-201ENST00000175091 H7C1H1 209 aa11.23□□□□□ -0.61
LAPTM4A-201ENST00000175091 DAZ2Q13117 558 aaKnown RBP11.23□□□□□ -0.61
LAPTM4A-201ENST00000175091 LINC01545Q5VT33 79 aa11.23□□□□□ -0.61
LAPTM4A-201ENST00000175091 IFI27L1Q96BM0 104 aa11.23□□□□□ -0.61
LAPTM4A-201ENST00000175091 IGHV3-73A0A0B4J1V6 119 aa11.23□□□□□ -0.61
LAPTM4A-201ENST00000175091 RRN3P1Q2M238 152 aa11.23□□□□□ -0.61
LAPTM4A-201ENST00000175091 LGALS9BQ3B8N2 356 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms