RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 PKHD1P08F94 4074 aa10.6□□□□□ -0.71
UBXN1-218ENST00000616865 RYR1P21817 5038 aa10.6□□□□□ -0.71
UBXN1-218ENST00000616865 IGKV3D-20A0A0C4DH25 116 aa10.59□□□□□ -0.71
UBXN1-218ENST00000616865 RPL19P84098 196 aaKnown RBP10.59□□□□□ -0.71
UBXN1-218ENST00000616865 RNASE8Q8TDE3 154 aaKnown RBP10.59□□□□□ -0.71
UBXN1-218ENST00000616865 ISOC2Q96AB3 205 aa10.59□□□□□ -0.71
UBXN1-218ENST00000616865 DYNC1H1Q14204 4646 aaKnown RBP10.59□□□□□ -0.71
UBXN1-218ENST00000616865 DNAH17Q9UFH2 4485 aa10.58□□□□□ -0.72
UBXN1-218ENST00000616865 IGHV3-16A0A0C4DH30 117 aa10.58□□□□□ -0.72
UBXN1-218ENST00000616865 FAM231DQ6ZW35 169 aa10.58□□□□□ -0.72
UBXN1-218ENST00000616865 OR10G8Q8NGN5 311 aa10.58□□□□□ -0.72
UBXN1-218ENST00000616865 SFRP2Q96HF1 295 aa10.58□□□□□ -0.72
UBXN1-218ENST00000616865 SPXQ9BT56 116 aa10.58□□□□□ -0.72
UBXN1-218ENST00000616865 NOP10Q9NPE3 64 aaKnown RBP10.58□□□□□ -0.72
UBXN1-218ENST00000616865 OSTCQ9NRP0 149 aa10.58□□□□□ -0.72
UBXN1-218ENST00000616865 MDFICQ9P1T7 246 aa10.58□□□□□ -0.72
UBXN1-218ENST00000616865 TEX48A0A1B0GUV7 120 aa10.57□□□□□ -0.72
UBXN1-218ENST00000616865 SPART-AS1P0CW21 52 aa10.57□□□□□ -0.72
UBXN1-218ENST00000616865 TCL1AP56279 114 aa10.57□□□□□ -0.72
UBXN1-218ENST00000616865 LINC00336Q6ZUF6 198 aa10.57□□□□□ -0.72
UBXN1-218ENST00000616865 IGHV4-4A0A075B6R2 117 aa10.56□□□□□ -0.72
UBXN1-218ENST00000616865 TRAV10A0A0B4J240 114 aa10.56□□□□□ -0.72
UBXN1-218ENST00000616865 LYRM9A8MSI8 78 aa10.56□□□□□ -0.72
UBXN1-218ENST00000616865 A8MWL6 223 aa10.56□□□□□ -0.72
UBXN1-218ENST00000616865 H3BVH4 76 aa10.56□□□□□ -0.72
UBXN1-218ENST00000616865 CXCL1P09341 107 aa10.56□□□□□ -0.72
UBXN1-218ENST00000616865 ADCYAP1P18509 176 aa10.56□□□□□ -0.72
UBXN1-218ENST00000616865 FAM222AQ5U5X8 452 aa10.56□□□□□ -0.72
UBXN1-218ENST00000616865 Q6ZTC4 211 aa10.56□□□□□ -0.72
UBXN1-218ENST00000616865 C11orf72Q8NBR9 251 aa10.56□□□□□ -0.72
UBXN1-218ENST00000616865 TPPP3Q9BW30 176 aa10.56□□□□□ -0.72
UBXN1-218ENST00000616865 DNAH11Q96DT5 4516 aa10.55□□□□□ -0.72
UBXN1-218ENST00000616865 TRGV1A0A0A0MS02 117 aa10.55□□□□□ -0.72
UBXN1-218ENST00000616865 A0A1B0GVY2 172 aa10.55□□□□□ -0.72
UBXN1-218ENST00000616865 PPP1R2P9O14990 202 aa10.55□□□□□ -0.72
UBXN1-218ENST00000616865 MT-ND4LP03901 98 aa10.55□□□□□ -0.72
UBXN1-218ENST00000616865 GZMBP10144 247 aa10.55□□□□□ -0.72
UBXN1-218ENST00000616865 DAZ2Q13117 558 aaKnown RBP10.55□□□□□ -0.72
UBXN1-218ENST00000616865 PHLDA3Q9Y5J5 127 aa10.55□□□□□ -0.72
UBXN1-218ENST00000616865 PLAC8L1A1L4L8 177 aa10.54□□□□□ -0.72
UBXN1-218ENST00000616865 M0R2P5 195 aa10.54□□□□□ -0.72
UBXN1-218ENST00000616865 ARMS2P0C7Q2 107 aa10.54□□□□□ -0.72
UBXN1-218ENST00000616865 DEFB130BP0DP73 79 aa10.54□□□□□ -0.72
UBXN1-218ENST00000616865 DEFB130AP0DP74 79 aa10.54□□□□□ -0.72
UBXN1-218ENST00000616865 DAD1P61803 113 aa10.54□□□□□ -0.72
UBXN1-218ENST00000616865 DNLZQ5SXM8 178 aa10.54□□□□□ -0.72
UBXN1-218ENST00000616865 FER1L6-AS1Q8NA97 138 aa10.54□□□□□ -0.72
UBXN1-218ENST00000616865 SYT8Q8NBV8 401 aa10.54□□□□□ -0.72
UBXN1-218ENST00000616865 IL36BQ9NZH7 164 aa10.54□□□□□ -0.72
UBXN1-218ENST00000616865 DKK2Q9UBU2 259 aa10.54□□□□□ -0.72
UBXN1-218ENST00000616865 CARHSP1Q9Y2V2 147 aaKnown RBP10.54□□□□□ -0.72
UBXN1-218ENST00000616865 A0A1W2PPQ1 181 aa10.53□□□□□ -0.72
UBXN1-218ENST00000616865 GAGE12BA1L429 117 aa10.53□□□□□ -0.72
UBXN1-218ENST00000616865 GAGE7O76087 117 aa10.53□□□□□ -0.72
UBXN1-218ENST00000616865 APOC3P02656 99 aa10.53□□□□□ -0.72
UBXN1-218ENST00000616865 GAGE12FP0CL80 117 aa10.53□□□□□ -0.72
UBXN1-218ENST00000616865 GAGE12GP0CL81 117 aa10.53□□□□□ -0.72
UBXN1-218ENST00000616865 GAGE12IP0CL82 117 aa10.53□□□□□ -0.72
UBXN1-218ENST00000616865 MED14OSP0DP75 135 aa10.53□□□□□ -0.72
UBXN1-218ENST00000616865 RNASE3P12724 160 aaKnown RBP10.53□□□□□ -0.72
UBXN1-218ENST00000616865 CT83Q5H943 113 aa10.53□□□□□ -0.72
UBXN1-218ENST00000616865 C10orf91Q5T1B1 145 aa10.53□□□□□ -0.72
UBXN1-218ENST00000616865 C9orf85Q96MD7 179 aa10.53□□□□□ -0.72
UBXN1-218ENST00000616865 MRPL16Q9NX20 251 aaKnown RBP10.53□□□□□ -0.72
UBXN1-218ENST00000616865 CELA1Q9UNI1 258 aa10.53□□□□□ -0.72
UBXN1-218ENST00000616865 ABCA13Q86UQ4 5058 aa10.52□□□□□ -0.73
UBXN1-218ENST00000616865 TRGV2A0A075B6R0 118 aa10.52□□□□□ -0.73
UBXN1-218ENST00000616865 LGALS9BQ3B8N2 356 aa10.52□□□□□ -0.73
UBXN1-218ENST00000616865 RNF212Q495C1 297 aa10.52□□□□□ -0.73
UBXN1-218ENST00000616865 ZNF876PQ49A33 203 aa10.52□□□□□ -0.73
UBXN1-218ENST00000616865 SPANXN1Q5VSR9 72 aa10.52□□□□□ -0.73
UBXN1-218ENST00000616865 TSKUQ8WUA8 353 aa10.52□□□□□ -0.73
UBXN1-218ENST00000616865 BORCS7Q96B45 105 aa10.52□□□□□ -0.73
UBXN1-218ENST00000616865 ANAPC16Q96DE5 110 aa10.52□□□□□ -0.73
UBXN1-218ENST00000616865 V9GYV3 84 aa10.52□□□□□ -0.73
UBXN1-218ENST00000616865 PKD1P98161 4303 aa10.52□□□□□ -0.73
UBXN1-218ENST00000616865 F2Z2F3 143 aa10.51□□□□□ -0.73
UBXN1-218ENST00000616865 M0R381 172 aa10.51□□□□□ -0.73
UBXN1-218ENST00000616865 SPINK4O60575 86 aa10.51□□□□□ -0.73
UBXN1-218ENST00000616865 SSTP61278 116 aa10.51□□□□□ -0.73
UBXN1-218ENST00000616865 Q6ZTI0 123 aa10.51□□□□□ -0.73
UBXN1-218ENST00000616865 ZFP82Q8N141 532 aa10.51□□□□□ -0.73
UBXN1-218ENST00000616865 SVBPQ8N300 66 aa10.51□□□□□ -0.73
UBXN1-218ENST00000616865 MUC21A0A0G2JKD1 596 aa10.5□□□□□ -0.73
UBXN1-218ENST00000616865 MUC21A0A140T8X8 626 aa10.5□□□□□ -0.73
UBXN1-218ENST00000616865 SNAPINO95295 136 aa10.5□□□□□ -0.73
UBXN1-218ENST00000616865 OR5AL1P0C617 328 aa10.5□□□□□ -0.73
UBXN1-218ENST00000616865 LYZL1Q6UWQ5 148 aa10.5□□□□□ -0.73
UBXN1-218ENST00000616865 PGLYRP4Q96LB8 373 aa10.5□□□□□ -0.73
UBXN1-218ENST00000616865 DEFB131BA0A096LNP1 70 aa10.49□□□□□ -0.73
UBXN1-218ENST00000616865 PRSS29PA6NIE9 313 aa10.49□□□□□ -0.73
UBXN1-218ENST00000616865 SNAI2O43623 268 aa10.49□□□□□ -0.73
UBXN1-218ENST00000616865 IGLC6P0CF74 106 aa10.49□□□□□ -0.73
UBXN1-218ENST00000616865 P0DMU3 169 aa10.49□□□□□ -0.73
UBXN1-218ENST00000616865 FAM231AP0DMU4 169 aa10.49□□□□□ -0.73
UBXN1-218ENST00000616865 FAM231CP0DMU5 169 aa10.49□□□□□ -0.73
UBXN1-218ENST00000616865 HTN3P15516 51 aa10.49□□□□□ -0.73
UBXN1-218ENST00000616865 CACNG7P62955 275 aa10.49□□□□□ -0.73
UBXN1-218ENST00000616865 RHEBQ15382 184 aa10.49□□□□□ -0.73
UBXN1-218ENST00000616865 POM121L12Q8N7R1 296 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms