RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 SLAQ13239 276 aa8.91□□□□□ -0.98
USE1-209ENST00000601592 CENPWQ5EE01 88 aa8.91□□□□□ -0.98
USE1-209ENST00000601592 ZNF506Q5JVG8 444 aa8.91□□□□□ -0.98
USE1-209ENST00000601592 COX8CQ7Z4L0 72 aa8.91□□□□□ -0.98
USE1-209ENST00000601592 MED9Q9NWA0 146 aa8.91□□□□□ -0.98
USE1-209ENST00000601592 DNAH6Q9C0G6 4158 aa8.9□□□□□ -0.98
USE1-209ENST00000601592 A0A096LPF7 62 aa8.9□□□□□ -0.98
USE1-209ENST00000601592 PGPEP1LA6NFU8 196 aa8.9□□□□□ -0.98
USE1-209ENST00000601592 TAGLN2P37802 199 aaKnown RBP8.9□□□□□ -0.98
USE1-209ENST00000601592 LINC01559Q495D7 138 aa8.9□□□□□ -0.98
USE1-209ENST00000601592 PCNPQ8WW12 178 aaKnown RBP8.9□□□□□ -0.98
USE1-209ENST00000601592 LINC00588Q9Y4M8 146 aa8.9□□□□□ -0.98
USE1-209ENST00000601592 IGHV3-73A0A0B4J1V6 119 aa8.89□□□□□ -0.99
USE1-209ENST00000601592 RAB19A4D1S5 217 aa8.89□□□□□ -0.99
USE1-209ENST00000601592 ARMS2P0C7Q2 107 aa8.89□□□□□ -0.99
USE1-209ENST00000601592 GNG4P50150 75 aa8.89□□□□□ -0.99
USE1-209ENST00000601592 RPL19P84098 196 aaKnown RBP8.89□□□□□ -0.99
USE1-209ENST00000601592 IL36BQ9NZH7 164 aa8.89□□□□□ -0.99
USE1-209ENST00000601592 RS1O15537 224 aa8.88□□□□□ -0.99
USE1-209ENST00000601592 GYPEP15421 78 aa8.88□□□□□ -0.99
USE1-209ENST00000601592 FAM3BP58499 235 aaPredicted RBP8.88□□□□□ -0.99
USE1-209ENST00000601592 MRPL23Q16540 153 aaKnown RBP8.88□□□□□ -0.99
USE1-209ENST00000601592 ESRGQ1W209 222 aa8.88□□□□□ -0.99
USE1-209ENST00000601592 CFAP126Q5VTH2 177 aa8.88□□□□□ -0.99
USE1-209ENST00000601592 SYT8Q8NBV8 401 aa8.88□□□□□ -0.99
USE1-209ENST00000601592 MLST8Q9BVC4 326 aa8.88□□□□□ -0.99
USE1-209ENST00000601592 PHLDA3Q9Y5J5 127 aa8.88□□□□□ -0.99
USE1-209ENST00000601592 RBFOX3A6NFN3 312 aa8.87□□□□□ -0.99
USE1-209ENST00000601592 M0R381 172 aa8.87□□□□□ -0.99
USE1-209ENST00000601592 SRIP30626 198 aa8.87□□□□□ -0.99
USE1-209ENST00000601592 CEBPGP53567 150 aa8.87□□□□□ -0.99
USE1-209ENST00000601592 ZNRF2Q8NHG8 242 aa8.87□□□□□ -0.99
USE1-209ENST00000601592 DAZAP1Q96EP5 407 aaKnown RBP8.87□□□□□ -0.99
USE1-209ENST00000601592 LOC100131303A0A0U1RQF7 123 aa8.86□□□□□ -0.99
USE1-209ENST00000601592 A8MWV9 139 aa8.86□□□□□ -0.99
USE1-209ENST00000601592 K7EQD1 137 aa8.86□□□□□ -0.99
USE1-209ENST00000601592 GATA1P15976 413 aaPredicted RBP8.86□□□□□ -0.99
USE1-209ENST00000601592 TOR2AQ5JU69 321 aa8.86□□□□□ -0.99
USE1-209ENST00000601592 DNLZQ5SXM8 178 aa8.86□□□□□ -0.99
USE1-209ENST00000601592 DMRTA1Q5VZB9 504 aa8.86□□□□□ -0.99
USE1-209ENST00000601592 PTH2Q96A98 100 aa8.86□□□□□ -0.99
USE1-209ENST00000601592 IGLV2-8P01709 118 aa8.85□□□□□ -0.99
USE1-209ENST00000601592 FAM74A4Q5TZK3 123 aa8.85□□□□□ -0.99
USE1-209ENST00000601592 NEGR1Q7Z3B1 354 aa8.85□□□□□ -0.99
USE1-209ENST00000601592 ZFP82Q8N141 532 aa8.85□□□□□ -0.99
USE1-209ENST00000601592 SLC25A29Q8N8R3 303 aa8.85□□□□□ -0.99
USE1-209ENST00000601592 PRADC1Q9BSG0 188 aa8.85□□□□□ -0.99
USE1-209ENST00000601592 EIF5A2Q9GZV4 153 aaKnown RBP8.85□□□□□ -0.99
USE1-209ENST00000601592 PARLQ9H300 379 aa8.85□□□□□ -0.99
USE1-209ENST00000601592 JPT2Q9H910 190 aa8.85□□□□□ -0.99
USE1-209ENST00000601592 MRPS16Q9Y3D3 137 aaKnown RBP8.85□□□□□ -0.99
USE1-209ENST00000601592 TRBV20OR9-2A0A075B6H5 130 aa8.84□□□□□ -0.99
USE1-209ENST00000601592 CIDEAO60543 219 aa8.84□□□□□ -0.99
USE1-209ENST00000601592 SSTP61278 116 aa8.84□□□□□ -0.99
USE1-209ENST00000601592 RHOHQ15669 191 aa8.84□□□□□ -0.99
USE1-209ENST00000601592 PIK3CD-AS1Q5SR53 167 aa8.84□□□□□ -0.99
USE1-209ENST00000601592 OR2D3Q8NGH3 330 aa8.84□□□□□ -0.99
USE1-209ENST00000601592 LYPD6BQ8NI32 183 aa8.84□□□□□ -0.99
USE1-209ENST00000601592 SMIM12Q96EX1 92 aa8.84□□□□□ -0.99
USE1-209ENST00000601592 TPPP3Q9BW30 176 aa8.84□□□□□ -0.99
USE1-209ENST00000601592 Q9H8V8 135 aa8.84□□□□□ -0.99
USE1-209ENST00000601592 BIN3Q9NQY0 253 aa8.84□□□□□ -0.99
USE1-209ENST00000601592 A0A087WWL8 130 aa8.83□□□□□ -1
USE1-209ENST00000601592 MUC21A0A0G2JKD1 596 aa8.83□□□□□ -1
USE1-209ENST00000601592 NBDYA0A0U1RRE5 68 aa8.83□□□□□ -1
USE1-209ENST00000601592 MUC21A0A140T8X8 626 aa8.83□□□□□ -1
USE1-209ENST00000601592 NXPH4O95158 308 aa8.83□□□□□ -1
USE1-209ENST00000601592 P01737 135 aa8.83□□□□□ -1
USE1-209ENST00000601592 CXCL1P09341 107 aa8.83□□□□□ -1
USE1-209ENST00000601592 MED14OSP0DP75 135 aa8.83□□□□□ -1
USE1-209ENST00000601592 GZMBP10144 247 aa8.83□□□□□ -1
USE1-209ENST00000601592 ZNF575Q86XF7 245 aa8.83□□□□□ -1
USE1-209ENST00000601592 SAMD10Q9BYL1 202 aa8.83□□□□□ -1
USE1-209ENST00000601592 SCRT2Q9NQ03 307 aa8.83□□□□□ -1
USE1-209ENST00000601592 TRBV6-4A0A1B0GX49 114 aa8.82□□□□□ -1
USE1-209ENST00000601592 TMEM250H0YL14 139 aa8.82□□□□□ -1
USE1-209ENST00000601592 RHODO00212 210 aa8.82□□□□□ -1
USE1-209ENST00000601592 SPANXN1Q5VSR9 72 aa8.82□□□□□ -1
USE1-209ENST00000601592 TEX261Q6UWH6 196 aa8.82□□□□□ -1
USE1-209ENST00000601592 LYPD5Q6UWN5 251 aa8.82□□□□□ -1
USE1-209ENST00000601592 ZFP2Q6ZN57 461 aa8.82□□□□□ -1
USE1-209ENST00000601592 Q6ZR54 194 aa8.82□□□□□ -1
USE1-209ENST00000601592 OR10AG1Q8NH19 301 aa8.82□□□□□ -1
USE1-209ENST00000601592 FAM210AQ96ND0 272 aa8.82□□□□□ -1
USE1-209ENST00000601592 UPK3BQ9BT76 320 aa8.82□□□□□ -1
USE1-209ENST00000601592 SIVA1O15304 175 aa8.81□□□□□ -1
USE1-209ENST00000601592 RPS20P60866 119 aaKnown RBP8.81□□□□□ -1
USE1-209ENST00000601592 SOHLH1Q5JUK2 328 aa8.81□□□□□ -1
USE1-209ENST00000601592 C1orf134Q5TEV5 83 aa8.81□□□□□ -1
USE1-209ENST00000601592 SH2D6Q7Z4S9 175 aa8.81□□□□□ -1
USE1-209ENST00000601592 SFRP2Q96HF1 295 aa8.81□□□□□ -1
USE1-209ENST00000601592 DNAH10Q8IVF4 4471 aa8.81□□□□□ -1
USE1-209ENST00000601592 XKRY2A2RUG3 117 aa8.8□□□□□ -1
USE1-209ENST00000601592 C19orf71A6NCJ1 209 aa8.8□□□□□ -1
USE1-209ENST00000601592 OR5AL1P0C617 328 aa8.8□□□□□ -1
USE1-209ENST00000601592 TTC32Q5I0X7 151 aa8.8□□□□□ -1
USE1-209ENST00000601592 Q6ZSN1 163 aa8.8□□□□□ -1
USE1-209ENST00000601592 C14orf178Q8N769 122 aaPredicted RBP8.8□□□□□ -1
USE1-209ENST00000601592 FER1L6-AS1Q8NA97 138 aa8.8□□□□□ -1
USE1-209ENST00000601592 OCC1Q8TAD7 63 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms