RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 IGLV2-18A0A075B6J9 118 aa11.69□□□□□ -0.54
TRIM28-215ENST00000601150 PGPEP1LA6NFU8 196 aa11.69□□□□□ -0.54
TRIM28-215ENST00000601150 LINC01559Q495D7 138 aa11.69□□□□□ -0.54
TRIM28-215ENST00000601150 ZNF506Q5JVG8 444 aa11.69□□□□□ -0.54
TRIM28-215ENST00000601150 DNLZQ5SXM8 178 aa11.69□□□□□ -0.54
TRIM28-215ENST00000601150 DERL1Q9BUN8 251 aa11.69□□□□□ -0.54
TRIM28-215ENST00000601150 IL36BQ9NZH7 164 aa11.69□□□□□ -0.54
TRIM28-215ENST00000601150 DNAH6Q9C0G6 4158 aa11.68□□□□□ -0.54
TRIM28-215ENST00000601150 M0R2N4 97 aa11.68□□□□□ -0.54
TRIM28-215ENST00000601150 RS1O15537 224 aa11.68□□□□□ -0.54
TRIM28-215ENST00000601150 CIDEAO60543 219 aa11.68□□□□□ -0.54
TRIM28-215ENST00000601150 ESRGQ1W209 222 aa11.68□□□□□ -0.54
TRIM28-215ENST00000601150 ZNRF2Q8NHG8 242 aa11.68□□□□□ -0.54
TRIM28-215ENST00000601150 GRIFINA4D1Z8 144 aa11.67□□□□□ -0.54
TRIM28-215ENST00000601150 H3BVH4 76 aa11.67□□□□□ -0.54
TRIM28-215ENST00000601150 MRPL23Q16540 153 aaKnown RBP11.67□□□□□ -0.54
TRIM28-215ENST00000601150 CENPWQ5EE01 88 aa11.67□□□□□ -0.54
TRIM28-215ENST00000601150 PIK3CD-AS1Q5SR53 167 aa11.67□□□□□ -0.54
TRIM28-215ENST00000601150 CFAP126Q5VTH2 177 aa11.67□□□□□ -0.54
TRIM28-215ENST00000601150 TMSB15BA0A087X1C1 80 aa11.66□□□□□ -0.54
TRIM28-215ENST00000601150 ARMS2P0C7Q2 107 aa11.66□□□□□ -0.54
TRIM28-215ENST00000601150 PRR27Q6MZM9 219 aa11.66□□□□□ -0.54
TRIM28-215ENST00000601150 PCNPQ8WW12 178 aaKnown RBP11.66□□□□□ -0.54
TRIM28-215ENST00000601150 MED9Q9NWA0 146 aa11.66□□□□□ -0.54
TRIM28-215ENST00000601150 A8MWV9 139 aa11.65□□□□□ -0.54
TRIM28-215ENST00000601150 GATA1P15976 413 aaPredicted RBP11.65□□□□□ -0.54
TRIM28-215ENST00000601150 Q6ZR54 194 aa11.65□□□□□ -0.54
TRIM28-215ENST00000601150 ZNF575Q86XF7 245 aa11.65□□□□□ -0.54
TRIM28-215ENST00000601150 SYT8Q8NBV8 401 aa11.65□□□□□ -0.54
TRIM28-215ENST00000601150 LYPD6BQ8NI32 183 aa11.65□□□□□ -0.54
TRIM28-215ENST00000601150 MRPS16Q9Y3D3 137 aaKnown RBP11.65□□□□□ -0.54
TRIM28-215ENST00000601150 RAB19A4D1S5 217 aa11.64□□□□□ -0.55
TRIM28-215ENST00000601150 CXCL1P09341 107 aa11.64□□□□□ -0.55
TRIM28-215ENST00000601150 GYPEP15421 78 aa11.64□□□□□ -0.55
TRIM28-215ENST00000601150 GNG4P50150 75 aa11.64□□□□□ -0.55
TRIM28-215ENST00000601150 SMIM12Q96EX1 92 aa11.64□□□□□ -0.55
TRIM28-215ENST00000601150 UPK3BQ9BT76 320 aa11.64□□□□□ -0.55
TRIM28-215ENST00000601150 PHLDA3Q9Y5J5 127 aa11.64□□□□□ -0.55
TRIM28-215ENST00000601150 IGHV3-73A0A0B4J1V6 119 aa11.63□□□□□ -0.55
TRIM28-215ENST00000601150 K7EQD1 137 aa11.63□□□□□ -0.55
TRIM28-215ENST00000601150 SRIP30626 198 aa11.63□□□□□ -0.55
TRIM28-215ENST00000601150 RPL19P84098 196 aaKnown RBP11.63□□□□□ -0.55
TRIM28-215ENST00000601150 NEGR1Q7Z3B1 354 aa11.63□□□□□ -0.55
TRIM28-215ENST00000601150 PARLQ9H300 379 aa11.63□□□□□ -0.55
TRIM28-215ENST00000601150 Q9H8V8 135 aa11.63□□□□□ -0.55
TRIM28-215ENST00000601150 SCRT2Q9NQ03 307 aa11.63□□□□□ -0.55
TRIM28-215ENST00000601150 NBDYA0A0U1RRE5 68 aa11.62□□□□□ -0.55
TRIM28-215ENST00000601150 RBFOX3A6NFN3 312 aa11.62□□□□□ -0.55
TRIM28-215ENST00000601150 IGLV2-8P01709 118 aa11.62□□□□□ -0.55
TRIM28-215ENST00000601150 MED14OSP0DP75 135 aa11.62□□□□□ -0.55
TRIM28-215ENST00000601150 MGST1P10620 155 aaKnown RBP11.62□□□□□ -0.55
TRIM28-215ENST00000601150 DMRTA1Q5VZB9 504 aa11.62□□□□□ -0.55
TRIM28-215ENST00000601150 ZFP2Q6ZN57 461 aa11.62□□□□□ -0.55
TRIM28-215ENST00000601150 TRBV6-4A0A1B0GX49 114 aa11.61□□□□□ -0.55
TRIM28-215ENST00000601150 RHOHQ15669 191 aa11.61□□□□□ -0.55
TRIM28-215ENST00000601150 ZFP82Q8N141 532 aa11.61□□□□□ -0.55
TRIM28-215ENST00000601150 SLC25A29Q8N8R3 303 aa11.61□□□□□ -0.55
TRIM28-215ENST00000601150 DAZAP1Q96EP5 407 aaKnown RBP11.61□□□□□ -0.55
TRIM28-215ENST00000601150 PRADC1Q9BSG0 188 aa11.61□□□□□ -0.55
TRIM28-215ENST00000601150 TRBV20OR9-2A0A075B6H5 130 aa11.6□□□□□ -0.55
TRIM28-215ENST00000601150 LOC100131303A0A0U1RQF7 123 aa11.6□□□□□ -0.55
TRIM28-215ENST00000601150 M0R381 172 aa11.6□□□□□ -0.55
TRIM28-215ENST00000601150 LYPD5Q6UWN5 251 aa11.6□□□□□ -0.55
TRIM28-215ENST00000601150 SH2D6Q7Z4S9 175 aa11.6□□□□□ -0.55
TRIM28-215ENST00000601150 BIN3Q9NQY0 253 aa11.6□□□□□ -0.55
TRIM28-215ENST00000601150 TMEM250H0YL14 139 aa11.59□□□□□ -0.55
TRIM28-215ENST00000601150 RHODO00212 210 aa11.59□□□□□ -0.55
TRIM28-215ENST00000601150 SOHLH1Q5JUK2 328 aa11.59□□□□□ -0.55
TRIM28-215ENST00000601150 LINC00336Q6ZUF6 198 aa11.59□□□□□ -0.55
TRIM28-215ENST00000601150 JPT2Q9H910 190 aa11.59□□□□□ -0.55
TRIM28-215ENST00000601150 C19orf71A6NCJ1 209 aa11.58□□□□□ -0.56
TRIM28-215ENST00000601150 RTL8CO15255 209 aa11.58□□□□□ -0.56
TRIM28-215ENST00000601150 TTC32Q5I0X7 151 aa11.58□□□□□ -0.56
TRIM28-215ENST00000601150 TOR2AQ5JU69 321 aa11.58□□□□□ -0.56
TRIM28-215ENST00000601150 C1orf134Q5TEV5 83 aa11.58□□□□□ -0.56
TRIM28-215ENST00000601150 UFSP1Q6NVU6 142 aa11.58□□□□□ -0.56
TRIM28-215ENST00000601150 SFRP2Q96HF1 295 aa11.58□□□□□ -0.56
TRIM28-215ENST00000601150 SAMD10Q9BYL1 202 aa11.58□□□□□ -0.56
TRIM28-215ENST00000601150 DNAH10Q8IVF4 4471 aa11.57□□□□□ -0.56
TRIM28-215ENST00000601150 SNAI2O43623 268 aa11.57□□□□□ -0.56
TRIM28-215ENST00000601150 NXPH4O95158 308 aa11.57□□□□□ -0.56
TRIM28-215ENST00000601150 OR5AL1P0C617 328 aa11.57□□□□□ -0.56
TRIM28-215ENST00000601150 RPS20P60866 119 aaKnown RBP11.57□□□□□ -0.56
TRIM28-215ENST00000601150 Q6ZSN1 163 aa11.57□□□□□ -0.56
TRIM28-215ENST00000601150 OR2D3Q8NGH3 330 aa11.57□□□□□ -0.56
TRIM28-215ENST00000601150 OR10AG1Q8NH19 301 aa11.57□□□□□ -0.56
TRIM28-215ENST00000601150 SSBP4Q9BWG4 385 aaPredicted RBP11.57□□□□□ -0.56
TRIM28-215ENST00000601150 EIF5A2Q9GZV4 153 aaKnown RBP11.57□□□□□ -0.56
TRIM28-215ENST00000601150 SIVA1O15304 175 aa11.56□□□□□ -0.56
TRIM28-215ENST00000601150 P01737 135 aa11.56□□□□□ -0.56
TRIM28-215ENST00000601150 FAM74A4Q5TZK3 123 aa11.56□□□□□ -0.56
TRIM28-215ENST00000601150 TEX261Q6UWH6 196 aa11.56□□□□□ -0.56
TRIM28-215ENST00000601150 FAM210AQ96ND0 272 aa11.56□□□□□ -0.56
TRIM28-215ENST00000601150 A0A087WWL8 130 aa11.55□□□□□ -0.56
TRIM28-215ENST00000601150 A0A1W2PPQ1 181 aa11.55□□□□□ -0.56
TRIM28-215ENST00000601150 NDUFS6O75380 124 aaKnown RBP11.55□□□□□ -0.56
TRIM28-215ENST00000601150 TIRAPP58753 221 aa11.55□□□□□ -0.56
TRIM28-215ENST00000601150 SPANXN1Q5VSR9 72 aa11.55□□□□□ -0.56
TRIM28-215ENST00000601150 EPPK1P58107 5090 aaKnown RBP11.54□□□□□ -0.56
TRIM28-215ENST00000601150 XKRY2A2RUG3 117 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms