RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 SMCO4Q9NRQ5 59 aa10.07□□□□□ -0.8
IRF3-223ENST00000599223 RPH3ALQ9UNE2 315 aa10.07□□□□□ -0.8
IRF3-223ENST00000599223 KLF12Q9Y4X4 402 aa10.07□□□□□ -0.8
IRF3-223ENST00000599223 LY96Q9Y6Y9 160 aa10.07□□□□□ -0.8
IRF3-223ENST00000599223 TRGV1A0A0A0MS02 117 aa10.06□□□□□ -0.8
IRF3-223ENST00000599223 SERTM2A0A1B0GWG4 89 aa10.06□□□□□ -0.8
IRF3-223ENST00000599223 ZNF324O75467 553 aaPredicted RBP10.06□□□□□ -0.8
IRF3-223ENST00000599223 SCO1O75880 301 aa10.06□□□□□ -0.8
IRF3-223ENST00000599223 ATRAIDQ6UW56 229 aa10.06□□□□□ -0.8
IRF3-223ENST00000599223 EXOC3-AS1Q8N2X6 119 aa10.06□□□□□ -0.8
IRF3-223ENST00000599223 ARL6IP6Q8N6S5 226 aa10.06□□□□□ -0.8
IRF3-223ENST00000599223 MRPL53Q96EL3 112 aaKnown RBP10.06□□□□□ -0.8
IRF3-223ENST00000599223 FMC1Q96HJ9 113 aa10.06□□□□□ -0.8
IRF3-223ENST00000599223 C18orf15Q96N68 181 aa10.06□□□□□ -0.8
IRF3-223ENST00000599223 CTDSP1Q9GZU7 261 aa10.06□□□□□ -0.8
IRF3-223ENST00000599223 AGPAT4-IT1Q9H0P7 198 aa10.06□□□□□ -0.8
IRF3-223ENST00000599223 TRGV2A0A075B6R0 118 aa10.05□□□□□ -0.8
IRF3-223ENST00000599223 IGKV2-40A0A087WW87 121 aaPredicted RBP10.05□□□□□ -0.8
IRF3-223ENST00000599223 A0A087WWC5 75 aa10.05□□□□□ -0.8
IRF3-223ENST00000599223 IGKV2D-40P01614 121 aaPredicted RBP10.05□□□□□ -0.8
IRF3-223ENST00000599223 ZFAND2AQ8N6M9 145 aa10.05□□□□□ -0.8
IRF3-223ENST00000599223 BIN3Q9NQY0 253 aa10.05□□□□□ -0.8
IRF3-223ENST00000599223 TP53TG3Q9ULZ0 132 aa10.05□□□□□ -0.8
IRF3-223ENST00000599223 FBLL1A6NHQ2 334 aaKnown RBP10.04□□□□□ -0.8
IRF3-223ENST00000599223 PPP1R2P9O14990 202 aa10.04□□□□□ -0.8
IRF3-223ENST00000599223 SPINK4O60575 86 aa10.04□□□□□ -0.8
IRF3-223ENST00000599223 TCRAP04437 139 aa10.04□□□□□ -0.8
IRF3-223ENST00000599223 TCL1AP56279 114 aa10.04□□□□□ -0.8
IRF3-223ENST00000599223 RPL23P62829 140 aaKnown RBP10.04□□□□□ -0.8
IRF3-223ENST00000599223 CENPWQ5EE01 88 aa10.04□□□□□ -0.8
IRF3-223ENST00000599223 LINC00467Q9BRT7 94 aa10.04□□□□□ -0.8
IRF3-223ENST00000599223 DERL1Q9BUN8 251 aa10.04□□□□□ -0.8
IRF3-223ENST00000599223 NXPH4O95158 308 aa10.03□□□□□ -0.8
IRF3-223ENST00000599223 IGHV3-53P01767 116 aa10.03□□□□□ -0.8
IRF3-223ENST00000599223 CRISP2P16562 243 aa10.03□□□□□ -0.8
IRF3-223ENST00000599223 RNASE4P34096 147 aaKnown RBP10.03□□□□□ -0.8
IRF3-223ENST00000599223 TMEM183BQ1AE95 376 aa10.03□□□□□ -0.8
IRF3-223ENST00000599223 ANXA2RQ3ZCQ2 193 aa10.03□□□□□ -0.8
IRF3-223ENST00000599223 LINC01551Q86U37 167 aa10.03□□□□□ -0.8
IRF3-223ENST00000599223 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.03□□□□□ -0.8
IRF3-223ENST00000599223 ANAPC16Q96DE5 110 aa10.03□□□□□ -0.8
IRF3-223ENST00000599223 SMIM12Q96EX1 92 aa10.03□□□□□ -0.8
IRF3-223ENST00000599223 VGLL1Q99990 258 aa10.03□□□□□ -0.8
IRF3-223ENST00000599223 MRPL16Q9NX20 251 aaKnown RBP10.03□□□□□ -0.8
IRF3-223ENST00000599223 TNFRSF18Q9Y5U5 241 aa10.03□□□□□ -0.8
IRF3-223ENST00000599223 GNG5P63218 68 aa10.02□□□□□ -0.81
IRF3-223ENST00000599223 C9orf47Q6ZRZ4 202 aa10.02□□□□□ -0.81
IRF3-223ENST00000599223 GOLT1AQ6ZVE7 132 aa10.02□□□□□ -0.81
IRF3-223ENST00000599223 BAGE2Q86Y30 109 aa10.02□□□□□ -0.81
IRF3-223ENST00000599223 C15orf54Q8N8G6 183 aa10.02□□□□□ -0.81
IRF3-223ENST00000599223 Q8TAT8 98 aa10.02□□□□□ -0.81
IRF3-223ENST00000599223 TMEM242Q9NWH2 141 aa10.02□□□□□ -0.81
IRF3-223ENST00000599223 SIVA1O15304 175 aa10.01□□□□□ -0.81
IRF3-223ENST00000599223 MGST1P10620 155 aaKnown RBP10.01□□□□□ -0.81
IRF3-223ENST00000599223 S100PP25815 95 aa10.01□□□□□ -0.81
IRF3-223ENST00000599223 TMEM75Q8N9X5 138 aa10.01□□□□□ -0.81
IRF3-223ENST00000599223 VPS13BQ7Z7G8 4022 aa10.01□□□□□ -0.81
IRF3-223ENST00000599223 DIRC3C9JPN6 131 aa10□□□□□ -0.81
IRF3-223ENST00000599223 PAX4O43316 350 aa10□□□□□ -0.81
IRF3-223ENST00000599223 GPX1P07203 203 aa10□□□□□ -0.81
IRF3-223ENST00000599223 DNAH10OSP0CZ25 163 aa10□□□□□ -0.81
IRF3-223ENST00000599223 IBA57Q5T440 356 aaKnown RBP10□□□□□ -0.81
IRF3-223ENST00000599223 CBLN2Q8IUK8 224 aa10□□□□□ -0.81
IRF3-223ENST00000599223 OCC1Q8TAD7 63 aa10□□□□□ -0.81
IRF3-223ENST00000599223 ISOC2Q96AB3 205 aa10□□□□□ -0.81
IRF3-223ENST00000599223 SFRP2Q96HF1 295 aa10□□□□□ -0.81
IRF3-223ENST00000599223 LINC00477Q96M19 166 aa10□□□□□ -0.81
IRF3-223ENST00000599223 ICOSQ9Y6W8 199 aa10□□□□□ -0.81
IRF3-223ENST00000599223 MYCBP2O75592 4640 aa10□□□□□ -0.81
IRF3-223ENST00000599223 TRBV20OR9-2A0A075B6H5 130 aa9.99□□□□□ -0.81
IRF3-223ENST00000599223 TRAV34A0A0B4J273 112 aa9.99□□□□□ -0.81
IRF3-223ENST00000599223 TRBV6-1A0A0K0K1D8 114 aa9.99□□□□□ -0.81
IRF3-223ENST00000599223 CRYBA4P53673 196 aa9.99□□□□□ -0.81
IRF3-223ENST00000599223 ERVFC1-1P60608 527 aa9.99□□□□□ -0.81
IRF3-223ENST00000599223 FLI1Q01543 452 aaPredicted RBP9.99□□□□□ -0.81
IRF3-223ENST00000599223 KCNIP4Q6PIL6 250 aa9.99□□□□□ -0.81
IRF3-223ENST00000599223 OR10G8Q8NGN5 311 aa9.99□□□□□ -0.81
IRF3-223ENST00000599223 C8orf49Q96NF6 230 aa9.99□□□□□ -0.81
IRF3-223ENST00000599223 NDFIP1Q9BT67 221 aa9.99□□□□□ -0.81
IRF3-223ENST00000599223 ZFP30Q9Y2G7 519 aa9.99□□□□□ -0.81
IRF3-223ENST00000599223 IGHV1OR15-1A0A075B7D0 117 aa9.98□□□□□ -0.81
IRF3-223ENST00000599223 PGPEP1LA6NFU8 196 aa9.98□□□□□ -0.81
IRF3-223ENST00000599223 FHL2Q14192 279 aa9.98□□□□□ -0.81
IRF3-223ENST00000599223 PRNTQ86SH4 94 aa9.98□□□□□ -0.81
IRF3-223ENST00000599223 DAZAP1Q96EP5 407 aaKnown RBP9.98□□□□□ -0.81
IRF3-223ENST00000599223 BTF3L4Q96K17 158 aa9.98□□□□□ -0.81
IRF3-223ENST00000599223 LINC00479Q96M42 142 aa9.98□□□□□ -0.81
IRF3-223ENST00000599223 ZNF492Q9P255 531 aa9.98□□□□□ -0.81
IRF3-223ENST00000599223 DMBT1Q9UGM3 2413 aaPredicted RBP9.98□□□□□ -0.81
IRF3-223ENST00000599223 RBAKDNA6NC62 111 aa9.97□□□□□ -0.81
IRF3-223ENST00000599223 GCGP01275 180 aa9.97□□□□□ -0.81
IRF3-223ENST00000599223 LTAP01374 205 aa9.97□□□□□ -0.81
IRF3-223ENST00000599223 XGP55808 180 aa9.97□□□□□ -0.81
IRF3-223ENST00000599223 RPL19P84098 196 aaKnown RBP9.97□□□□□ -0.81
IRF3-223ENST00000599223 MUC21Q5SSG8 566 aa9.97□□□□□ -0.81
IRF3-223ENST00000599223 SAPCD1Q5SSQ6 148 aa9.97□□□□□ -0.81
IRF3-223ENST00000599223 TMEM78Q5T7P6 136 aa9.97□□□□□ -0.81
IRF3-223ENST00000599223 LYPD5Q6UWN5 251 aa9.97□□□□□ -0.81
IRF3-223ENST00000599223 Q86TA4 180 aa9.97□□□□□ -0.81
IRF3-223ENST00000599223 PRO0255Q9UI72 69 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms