RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 FAM231AP0DMU4 169 aa9.6□□□□□ -0.87
SHKBP1-207ENST00000595631 FAM231CP0DMU5 169 aa9.6□□□□□ -0.87
SHKBP1-207ENST00000595631 MGST1P10620 155 aaKnown RBP9.6□□□□□ -0.87
SHKBP1-207ENST00000595631 S100A4P26447 101 aaKnown RBP9.6□□□□□ -0.87
SHKBP1-207ENST00000595631 UBE2DNLQ8IWF7 75 aa9.6□□□□□ -0.87
SHKBP1-207ENST00000595631 OR4C5Q8NGB2 326 aa9.6□□□□□ -0.87
SHKBP1-207ENST00000595631 TRGV4A0A0C4DH28 118 aa9.59□□□□□ -0.87
SHKBP1-207ENST00000595631 ARMS2P0C7Q2 107 aa9.59□□□□□ -0.87
SHKBP1-207ENST00000595631 GNG4P50150 75 aa9.59□□□□□ -0.87
SHKBP1-207ENST00000595631 CRYBA4P53673 196 aa9.59□□□□□ -0.87
SHKBP1-207ENST00000595631 IGHV3-73A0A0B4J1V6 119 aa9.58□□□□□ -0.88
SHKBP1-207ENST00000595631 PAX4O43316 350 aa9.58□□□□□ -0.88
SHKBP1-207ENST00000595631 DNLZQ5SXM8 178 aa9.58□□□□□ -0.88
SHKBP1-207ENST00000595631 CFAP126Q5VTH2 177 aa9.58□□□□□ -0.88
SHKBP1-207ENST00000595631 FAM210AQ96ND0 272 aa9.58□□□□□ -0.88
SHKBP1-207ENST00000595631 IL36BQ9NZH7 164 aa9.58□□□□□ -0.88
SHKBP1-207ENST00000595631 HHLA3Q9XRX5 114 aa9.58□□□□□ -0.88
SHKBP1-207ENST00000595631 DNAH6Q9C0G6 4158 aa9.57□□□□□ -0.88
SHKBP1-207ENST00000595631 A0A096LPF7 62 aa9.57□□□□□ -0.88
SHKBP1-207ENST00000595631 H3BNG1 76 aa9.57□□□□□ -0.88
SHKBP1-207ENST00000595631 RS1O15537 224 aa9.57□□□□□ -0.88
SHKBP1-207ENST00000595631 CEBPGP53567 150 aa9.57□□□□□ -0.88
SHKBP1-207ENST00000595631 EIF5A2Q9GZV4 153 aaKnown RBP9.57□□□□□ -0.88
SHKBP1-207ENST00000595631 PARLQ9H300 379 aa9.57□□□□□ -0.88
SHKBP1-207ENST00000595631 JPT2Q9H910 190 aa9.57□□□□□ -0.88
SHKBP1-207ENST00000595631 PRO0255Q9UI72 69 aa9.57□□□□□ -0.88
SHKBP1-207ENST00000595631 KMT2AQ03164 3969 aa9.56□□□□□ -0.88
SHKBP1-207ENST00000595631 LOC100131303A0A0U1RQF7 123 aa9.56□□□□□ -0.88
SHKBP1-207ENST00000595631 DMRTA1Q5VZB9 504 aa9.56□□□□□ -0.88
SHKBP1-207ENST00000595631 PTH2Q96A98 100 aa9.56□□□□□ -0.88
SHKBP1-207ENST00000595631 SCRT2Q9NQ03 307 aa9.56□□□□□ -0.88
SHKBP1-207ENST00000595631 LINC00588Q9Y4M8 146 aa9.56□□□□□ -0.88
SHKBP1-207ENST00000595631 IGLV2-18A0A075B6J9 118 aa9.55□□□□□ -0.88
SHKBP1-207ENST00000595631 MUC21A0A0G2JKD1 596 aa9.55□□□□□ -0.88
SHKBP1-207ENST00000595631 MUC21A0A140T8X8 626 aa9.55□□□□□ -0.88
SHKBP1-207ENST00000595631 C19orf71A6NCJ1 209 aa9.55□□□□□ -0.88
SHKBP1-207ENST00000595631 TMEM250H0YL14 139 aa9.55□□□□□ -0.88
SHKBP1-207ENST00000595631 K7EN84 100 aa9.55□□□□□ -0.88
SHKBP1-207ENST00000595631 M0R381 172 aa9.55□□□□□ -0.88
SHKBP1-207ENST00000595631 GZMBP10144 247 aa9.55□□□□□ -0.88
SHKBP1-207ENST00000595631 ESRGQ1W209 222 aa9.55□□□□□ -0.88
SHKBP1-207ENST00000595631 RNF212Q495C1 297 aa9.55□□□□□ -0.88
SHKBP1-207ENST00000595631 OCC1Q8TAD7 63 aa9.55□□□□□ -0.88
SHKBP1-207ENST00000595631 SMIM12Q96EX1 92 aa9.55□□□□□ -0.88
SHKBP1-207ENST00000595631 SAMD10Q9BYL1 202 aa9.55□□□□□ -0.88
SHKBP1-207ENST00000595631 PHLDA3Q9Y5J5 127 aa9.55□□□□□ -0.88
SHKBP1-207ENST00000595631 M0R2N4 97 aa9.54□□□□□ -0.88
SHKBP1-207ENST00000595631 SRP19P09132 144 aaKnown RBP9.54□□□□□ -0.88
SHKBP1-207ENST00000595631 GATA1P15976 413 aaPredicted RBP9.54□□□□□ -0.88
SHKBP1-207ENST00000595631 OR2D3Q8NGH3 330 aa9.54□□□□□ -0.88
SHKBP1-207ENST00000595631 OR10AG1Q8NH19 301 aa9.54□□□□□ -0.88
SHKBP1-207ENST00000595631 ICOSQ9Y6W8 199 aa9.54□□□□□ -0.88
SHKBP1-207ENST00000595631 C9JQL5 133 aa9.53□□□□□ -0.88
SHKBP1-207ENST00000595631 K7EQD1 137 aa9.53□□□□□ -0.88
SHKBP1-207ENST00000595631 CXCL1P09341 107 aa9.53□□□□□ -0.88
SHKBP1-207ENST00000595631 GYPEP15421 78 aa9.53□□□□□ -0.88
SHKBP1-207ENST00000595631 CCL18P55774 89 aa9.53□□□□□ -0.88
SHKBP1-207ENST00000595631 SSTP61278 116 aa9.53□□□□□ -0.88
SHKBP1-207ENST00000595631 SRSF3P84103 164 aaKnown RBP9.53□□□□□ -0.88
SHKBP1-207ENST00000595631 SLAQ13239 276 aa9.53□□□□□ -0.88
SHKBP1-207ENST00000595631 Q6ZSN1 163 aa9.53□□□□□ -0.88
SHKBP1-207ENST00000595631 SYT8Q8NBV8 401 aa9.53□□□□□ -0.88
SHKBP1-207ENST00000595631 DAZAP1Q96EP5 407 aaKnown RBP9.53□□□□□ -0.88
SHKBP1-207ENST00000595631 A8MWV9 139 aa9.52□□□□□ -0.89
SHKBP1-207ENST00000595631 P01737 135 aa9.52□□□□□ -0.89
SHKBP1-207ENST00000595631 MED14OSP0DP75 135 aa9.52□□□□□ -0.89
SHKBP1-207ENST00000595631 SLC25A29Q8N8R3 303 aa9.52□□□□□ -0.89
SHKBP1-207ENST00000595631 NUDT10Q8NFP7 164 aa9.52□□□□□ -0.89
SHKBP1-207ENST00000595631 NUDT11Q96G61 164 aa9.52□□□□□ -0.89
SHKBP1-207ENST00000595631 RNASE7Q9H1E1 156 aaKnown RBP9.52□□□□□ -0.89
SHKBP1-207ENST00000595631 A0A087WWL8 130 aa9.51□□□□□ -0.89
SHKBP1-207ENST00000595631 SNAI2O43623 268 aa9.51□□□□□ -0.89
SHKBP1-207ENST00000595631 MRPL23Q16540 153 aaKnown RBP9.51□□□□□ -0.89
SHKBP1-207ENST00000595631 PIK3CD-AS1Q5SR53 167 aa9.51□□□□□ -0.89
SHKBP1-207ENST00000595631 FAM74A4Q5TZK3 123 aa9.51□□□□□ -0.89
SHKBP1-207ENST00000595631 UFSP1Q6NVU6 142 aa9.51□□□□□ -0.89
SHKBP1-207ENST00000595631 ZFP82Q8N141 532 aa9.51□□□□□ -0.89
SHKBP1-207ENST00000595631 ZNRF2Q8NHG8 242 aa9.51□□□□□ -0.89
SHKBP1-207ENST00000595631 SFRP2Q96HF1 295 aa9.51□□□□□ -0.89
SHKBP1-207ENST00000595631 SMIM7Q9BQ49 75 aa9.51□□□□□ -0.89
SHKBP1-207ENST00000595631 SSBP4Q9BWG4 385 aaPredicted RBP9.51□□□□□ -0.89
SHKBP1-207ENST00000595631 ZNF727A8MUV8 499 aa9.5□□□□□ -0.89
SHKBP1-207ENST00000595631 NXPH4O95158 308 aa9.5□□□□□ -0.89
SHKBP1-207ENST00000595631 OR5AL1P0C617 328 aa9.5□□□□□ -0.89
SHKBP1-207ENST00000595631 IGLC6P0CF74 106 aa9.5□□□□□ -0.89
SHKBP1-207ENST00000595631 SRIP30626 198 aa9.5□□□□□ -0.89
SHKBP1-207ENST00000595631 IFITM2Q01629 132 aa9.5□□□□□ -0.89
SHKBP1-207ENST00000595631 TPPP3Q9BW30 176 aa9.5□□□□□ -0.89
SHKBP1-207ENST00000595631 BIN3Q9NQY0 253 aa9.5□□□□□ -0.89
SHKBP1-207ENST00000595631 Q9UF83 564 aa9.5□□□□□ -0.89
SHKBP1-207ENST00000595631 NDUFS6O75380 124 aaKnown RBP9.49□□□□□ -0.89
SHKBP1-207ENST00000595631 CRYGDP07320 174 aa9.49□□□□□ -0.89
SHKBP1-207ENST00000595631 RPS20P60866 119 aaKnown RBP9.49□□□□□ -0.89
SHKBP1-207ENST00000595631 ZFP2Q6ZN57 461 aa9.49□□□□□ -0.89
SHKBP1-207ENST00000595631 C14orf178Q8N769 122 aaPredicted RBP9.49□□□□□ -0.89
SHKBP1-207ENST00000595631 FER1L6-AS1Q8NA97 138 aa9.49□□□□□ -0.89
SHKBP1-207ENST00000595631 MRPS16Q9Y3D3 137 aaKnown RBP9.49□□□□□ -0.89
SHKBP1-207ENST00000595631 TRBV6-4A0A1B0GX49 114 aa9.48□□□□□ -0.89
SHKBP1-207ENST00000595631 CIDEAO60543 219 aa9.48□□□□□ -0.89
SHKBP1-207ENST00000595631 FAM3BP58499 235 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms