RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 SUN5Q8TC36 379 aa12.11□□□□□ -0.47
CCDC43-204ENST00000588687 SCGB1C1Q8TD33 95 aa12.11□□□□□ -0.47
CCDC43-204ENST00000588687 DEFB104AQ8WTQ1 72 aa12.11□□□□□ -0.47
CCDC43-204ENST00000588687 DAZ3Q9NR90 486 aaKnown RBP12.11□□□□□ -0.47
CCDC43-204ENST00000588687 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.1□□□□□ -0.47
CCDC43-204ENST00000588687 SERTM2A0A1B0GWG4 89 aa12.1□□□□□ -0.47
CCDC43-204ENST00000588687 GCGP01275 180 aa12.1□□□□□ -0.47
CCDC43-204ENST00000588687 ARL14EPLP0DKL9 152 aa12.1□□□□□ -0.47
CCDC43-204ENST00000588687 ACOT6Q3I5F7 207 aaPredicted RBP12.1□□□□□ -0.47
CCDC43-204ENST00000588687 UFSP1Q6NVU6 142 aa12.1□□□□□ -0.47
CCDC43-204ENST00000588687 C5orf17Q8NAS9 161 aa12.1□□□□□ -0.47
CCDC43-204ENST00000588687 PARLQ9H300 379 aa12.1□□□□□ -0.47
CCDC43-204ENST00000588687 TRAV8-3A0A0A6YYJ7 113 aa12.09□□□□□ -0.47
CCDC43-204ENST00000588687 TAAR5O14804 337 aa12.09□□□□□ -0.47
CCDC43-204ENST00000588687 LINC00479Q96M42 142 aa12.09□□□□□ -0.47
CCDC43-204ENST00000588687 NDFIP1Q9BT67 221 aa12.09□□□□□ -0.47
CCDC43-204ENST00000588687 GGTLC3B5MD39 225 aa12.08□□□□□ -0.48
CCDC43-204ENST00000588687 UPK1BO75841 260 aa12.08□□□□□ -0.48
CCDC43-204ENST00000588687 STAG3L2P0CL84 134 aa12.08□□□□□ -0.48
CCDC43-204ENST00000588687 STAG3L3P0CL85 134 aa12.08□□□□□ -0.48
CCDC43-204ENST00000588687 PET100P0DJ07 73 aa12.08□□□□□ -0.48
CCDC43-204ENST00000588687 ZFP2Q6ZN57 461 aa12.08□□□□□ -0.48
CCDC43-204ENST00000588687 DNAJC30Q96LL9 226 aa12.08□□□□□ -0.48
CCDC43-204ENST00000588687 NDUFA13Q9P0J0 144 aa12.08□□□□□ -0.48
CCDC43-204ENST00000588687 PSG8Q9UQ74 426 aa12.08□□□□□ -0.48
CCDC43-204ENST00000588687 A0A1W2PPV4 95 aa12.07□□□□□ -0.48
CCDC43-204ENST00000588687 GAGE12JA6NER3 117 aa12.07□□□□□ -0.48
CCDC43-204ENST00000588687 INMT-MINDY4F8WBC2 141 aa12.07□□□□□ -0.48
CCDC43-204ENST00000588687 GAGE1Q13065 139 aa12.07□□□□□ -0.48
CCDC43-204ENST00000588687 GAGE4Q13068 117 aa12.07□□□□□ -0.48
CCDC43-204ENST00000588687 GAGE5Q13069 117 aa12.07□□□□□ -0.48
CCDC43-204ENST00000588687 GAGE13Q4V321 117 aa12.07□□□□□ -0.48
CCDC43-204ENST00000588687 PIK3CD-AS1Q5SR53 167 aa12.07□□□□□ -0.48
CCDC43-204ENST00000588687 OR10G9Q8NGN4 311 aa12.07□□□□□ -0.48
CCDC43-204ENST00000588687 OR10G7Q8NGN6 311 aa12.07□□□□□ -0.48
CCDC43-204ENST00000588687 BAALCQ8WXS3 180 aa12.07□□□□□ -0.48
CCDC43-204ENST00000588687 MARVELD1Q9BSK0 173 aa12.07□□□□□ -0.48
CCDC43-204ENST00000588687 IGKV3D-20A0A0C4DH25 116 aa12.06□□□□□ -0.48
CCDC43-204ENST00000588687 CDC34P49427 236 aaPredicted RBP12.06□□□□□ -0.48
CCDC43-204ENST00000588687 OR2G3Q8NGZ4 309 aa12.06□□□□□ -0.48
CCDC43-204ENST00000588687 FLI1Q01543 452 aaPredicted RBP12.05□□□□□ -0.48
CCDC43-204ENST00000588687 SMUG1Q53HV7 270 aa12.05□□□□□ -0.48
CCDC43-204ENST00000588687 C14orf178Q8N769 122 aaPredicted RBP12.05□□□□□ -0.48
CCDC43-204ENST00000588687 S100ZQ8WXG8 99 aa12.05□□□□□ -0.48
CCDC43-204ENST00000588687 CHAC1Q9BUX1 264 aa12.05□□□□□ -0.48
CCDC43-204ENST00000588687 SAMD10Q9BYL1 202 aa12.05□□□□□ -0.48
CCDC43-204ENST00000588687 JPT2Q9H910 190 aa12.05□□□□□ -0.48
CCDC43-204ENST00000588687 A8MWV9 139 aa12.04□□□□□ -0.48
CCDC43-204ENST00000588687 GCHFRP30047 84 aa12.04□□□□□ -0.48
CCDC43-204ENST00000588687 TOR2AQ5JU69 321 aa12.04□□□□□ -0.48
CCDC43-204ENST00000588687 CYB561D1Q8N8Q1 229 aa12.04□□□□□ -0.48
CCDC43-204ENST00000588687 RNF222A6NCQ9 220 aa12.03□□□□□ -0.48
CCDC43-204ENST00000588687 ZFP69Q49AA0 526 aa12.03□□□□□ -0.48
CCDC43-204ENST00000588687 PRNTQ86SH4 94 aa12.03□□□□□ -0.48
CCDC43-204ENST00000588687 NIT1Q86X76 327 aa12.03□□□□□ -0.48
CCDC43-204ENST00000588687 CIRBP-AS1Q8TBR5 109 aa12.03□□□□□ -0.48
CCDC43-204ENST00000588687 RAB24Q969Q5 203 aa12.03□□□□□ -0.48
CCDC43-204ENST00000588687 EPDR1Q9UM22 224 aa12.03□□□□□ -0.48
CCDC43-204ENST00000588687 A0A087WWC5 75 aa12.02□□□□□ -0.49
CCDC43-204ENST00000588687 OR2T35Q8NGX2 323 aa12.02□□□□□ -0.49
CCDC43-204ENST00000588687 SH3BGRL3Q9H299 93 aa12.02□□□□□ -0.49
CCDC43-204ENST00000588687 COX11Q9Y6N1 276 aa12.02□□□□□ -0.49
CCDC43-204ENST00000588687 K7EQM0 130 aa12.01□□□□□ -0.49
CCDC43-204ENST00000588687 SSNA1O43805 119 aa12.01□□□□□ -0.49
CCDC43-204ENST00000588687 SUMO1P63165 101 aaKnown RBP12.01□□□□□ -0.49
CCDC43-204ENST00000588687 SERTAD4-AS1Q5TG53 156 aa12.01□□□□□ -0.49
CCDC43-204ENST00000588687 ATRAIDQ6UW56 229 aa12.01□□□□□ -0.49
CCDC43-204ENST00000588687 IL36BQ9NZH7 164 aa12.01□□□□□ -0.49
CCDC43-204ENST00000588687 Q8N976 141 aa12□□□□□ -0.49
CCDC43-204ENST00000588687 PSMG3Q9BT73 122 aaPredicted RBP12□□□□□ -0.49
CCDC43-204ENST00000588687 RBFOX3A6NFN3 312 aa11.99□□□□□ -0.49
CCDC43-204ENST00000588687 OXTP01178 125 aa11.99□□□□□ -0.49
CCDC43-204ENST00000588687 ASIPP42127 132 aa11.99□□□□□ -0.49
CCDC43-204ENST00000588687 FGF8P55075 233 aaPredicted RBP11.99□□□□□ -0.49
CCDC43-204ENST00000588687 LGALSLQ3ZCW2 172 aaPredicted RBP11.99□□□□□ -0.49
CCDC43-204ENST00000588687 SAPCD1Q5SSQ6 148 aa11.99□□□□□ -0.49
CCDC43-204ENST00000588687 DNLZQ5SXM8 178 aa11.99□□□□□ -0.49
CCDC43-204ENST00000588687 DMRTA1Q5VZB9 504 aa11.99□□□□□ -0.49
CCDC43-204ENST00000588687 HSD17B11Q8NBQ5 300 aa11.99□□□□□ -0.49
CCDC43-204ENST00000588687 ARL2-SNX15V9GYD0 113 aa11.99□□□□□ -0.49
CCDC43-204ENST00000588687 IGKV2D-24A0A075B6R9 120 aa11.98□□□□□ -0.49
CCDC43-204ENST00000588687 TRAV34A0A0B4J273 112 aa11.98□□□□□ -0.49
CCDC43-204ENST00000588687 ATP6V0CP27449 155 aa11.98□□□□□ -0.49
CCDC43-204ENST00000588687 RMI2Q96E14 147 aa11.98□□□□□ -0.49
CCDC43-204ENST00000588687 TMEM167BQ9NRX6 74 aa11.98□□□□□ -0.49
CCDC43-204ENST00000588687 KLK12Q9UKR0 248 aa11.98□□□□□ -0.49
CCDC43-204ENST00000588687 H3BVH4 76 aa11.97□□□□□ -0.49
CCDC43-204ENST00000588687 RHODO00212 210 aa11.97□□□□□ -0.49
CCDC43-204ENST00000588687 IGLV2-8P01709 118 aa11.97□□□□□ -0.49
CCDC43-204ENST00000588687 S100A4P26447 101 aaKnown RBP11.97□□□□□ -0.49
CCDC43-204ENST00000588687 CRIP1P50238 77 aa11.97□□□□□ -0.49
CCDC43-204ENST00000588687 Q86TA4 180 aa11.97□□□□□ -0.49
CCDC43-204ENST00000588687 CXorf1O96002 111 aa11.96□□□□□ -0.49
CCDC43-204ENST00000588687 SYT8Q8NBV8 401 aa11.96□□□□□ -0.49
CCDC43-204ENST00000588687 CHCHD7Q9BUK0 85 aa11.96□□□□□ -0.49
CCDC43-204ENST00000588687 A0A1W2PRE2 83 aa11.95□□□□□ -0.5
CCDC43-204ENST00000588687 FABP5P3A8MUU1 101 aa11.95□□□□□ -0.5
CCDC43-204ENST00000588687 KRBOX1C9JBD0 128 aa11.95□□□□□ -0.5
CCDC43-204ENST00000588687 ZNF726P1Q15940 193 aa11.95□□□□□ -0.5
CCDC43-204ENST00000588687 COX8CQ7Z4L0 72 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms