RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 C5orf67F2Z3F1 127 aa3.3□□□□□ -1.88
VMP1-208ENST00000588617 COX4I1P13073 169 aa3.3□□□□□ -1.88
VMP1-208ENST00000588617 DEFB115Q30KQ5 88 aa3.3□□□□□ -1.88
VMP1-208ENST00000588617 CCDC58Q4VC31 144 aa3.3□□□□□ -1.88
VMP1-208ENST00000588617 HSD17B12Q53GQ0 312 aa3.3□□□□□ -1.88
VMP1-208ENST00000588617 FKBP11Q9NYL4 201 aa3.3□□□□□ -1.88
VMP1-208ENST00000588617 PCNTO95613 3336 aa3.3□□□□□ -1.88
VMP1-208ENST00000588617 PHIPQ8WWQ0 1821 aa3.3□□□□□ -1.88
VMP1-208ENST00000588617 RBBP6Q7Z6E9 1792 aaKnown RBP3.3□□□□□ -1.88
VMP1-208ENST00000588617 MED12LQ86YW9 2145 aa3.29□□□□□ -1.88
VMP1-208ENST00000588617 CXCL8P10145 99 aa3.29□□□□□ -1.88
VMP1-208ENST00000588617 KRTAP12-1P59990 96 aa3.29□□□□□ -1.88
VMP1-208ENST00000588617 HIST1H1AQ02539 215 aaPredicted RBP3.29□□□□□ -1.88
VMP1-208ENST00000588617 ZNF833PQ6ZTB9 187 aa3.29□□□□□ -1.88
VMP1-208ENST00000588617 C15orf53Q8NAA6 179 aa3.29□□□□□ -1.88
VMP1-208ENST00000588617 Q8TAT8 98 aa3.29□□□□□ -1.88
VMP1-208ENST00000588617 Q9Y3F1 56 aa3.29□□□□□ -1.88
VMP1-208ENST00000588617 C9orf170A2RU37 121 aa3.28□□□□□ -1.88
VMP1-208ENST00000588617 ZNF736B4DX44 427 aaPredicted RBP3.28□□□□□ -1.88
VMP1-208ENST00000588617 UQCRQO14949 82 aa3.28□□□□□ -1.88
VMP1-208ENST00000588617 HBDP02042 147 aa3.28□□□□□ -1.88
VMP1-208ENST00000588617 TCRAP04437 139 aa3.28□□□□□ -1.88
VMP1-208ENST00000588617 SAA1P0DJI8 122 aaPredicted RBP3.28□□□□□ -1.88
VMP1-208ENST00000588617 LSM3P62310 102 aaKnown RBP3.28□□□□□ -1.88
VMP1-208ENST00000588617 OR8J3Q8NGG0 315 aa3.28□□□□□ -1.88
VMP1-208ENST00000588617 OR5AK2Q8NH90 309 aa3.28□□□□□ -1.88
VMP1-208ENST00000588617 SMIM3Q9BZL3 60 aa3.28□□□□□ -1.88
VMP1-208ENST00000588617 BANF2Q9H503 90 aa3.28□□□□□ -1.88
VMP1-208ENST00000588617 KLK9Q9UKQ9 250 aa3.28□□□□□ -1.88
VMP1-208ENST00000588617 PARP14Q460N5 1801 aa3.28□□□□□ -1.88
VMP1-208ENST00000588617 ZNF236Q9UL36 1845 aa3.28□□□□□ -1.88
VMP1-208ENST00000588617 TRACP01848 142 aa3.27□□□□□ -1.89
VMP1-208ENST00000588617 SLC25A5P05141 298 aaKnown RBP3.27□□□□□ -1.89
VMP1-208ENST00000588617 MPC1LP0DKB6 136 aa3.27□□□□□ -1.89
VMP1-208ENST00000588617 GKN2Q86XP6 184 aa3.27□□□□□ -1.89
VMP1-208ENST00000588617 MYLKQ15746 1914 aa3.27□□□□□ -1.89
VMP1-208ENST00000588617 MGAMO43451 1857 aa3.26□□□□□ -1.89
VMP1-208ENST00000588617 HTTP42858 3142 aa3.26□□□□□ -1.89
VMP1-208ENST00000588617 LOC107986453A0A1B0GWG9 222 aa3.26□□□□□ -1.89
VMP1-208ENST00000588617 GNG11P61952 73 aa3.26□□□□□ -1.89
VMP1-208ENST00000588617 CNBPP62633 177 aaKnown RBP3.26□□□□□ -1.89
VMP1-208ENST00000588617 WHAMMP3Q1A5X7 153 aa3.26□□□□□ -1.89
VMP1-208ENST00000588617 HAGHLQ6PII5 290 aaPredicted RBP3.26□□□□□ -1.89
VMP1-208ENST00000588617 OR5AS1Q8N127 324 aa3.26□□□□□ -1.89
VMP1-208ENST00000588617 OR4S1Q8NGB4 309 aa3.26□□□□□ -1.89
VMP1-208ENST00000588617 ZNF431Q8TF32 576 aaPredicted RBP3.26□□□□□ -1.89
VMP1-208ENST00000588617 MAGOHBQ96A72 148 aaKnown RBP3.26□□□□□ -1.89
VMP1-208ENST00000588617 PFDN5Q99471 154 aa3.26□□□□□ -1.89
VMP1-208ENST00000588617 TSC22D3Q99576 134 aa3.26□□□□□ -1.89
VMP1-208ENST00000588617 LRRC37A2A6NM11 1700 aa3.26□□□□□ -1.89
VMP1-208ENST00000588617 PTPRFP10586 1907 aa3.26□□□□□ -1.89
VMP1-208ENST00000588617 UQCRHLA0A096LP55 91 aa3.25□□□□□ -1.89
VMP1-208ENST00000588617 UQCRHP07919 91 aa3.25□□□□□ -1.89
VMP1-208ENST00000588617 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.25□□□□□ -1.89
VMP1-208ENST00000588617 TSTD1Q8NFU3 115 aa3.25□□□□□ -1.89
VMP1-208ENST00000588617 ZNF563Q8TA94 476 aa3.25□□□□□ -1.89
VMP1-208ENST00000588617 NAA38Q9BRA0 125 aaKnown RBP3.25□□□□□ -1.89
VMP1-208ENST00000588617 CENPFP49454 3210 aa3.25□□□□□ -1.89
VMP1-208ENST00000588617 MIF4GDA9UHW6 222 aaKnown RBP3.24□□□□□ -1.89
VMP1-208ENST00000588617 MRPS14O60783 128 aaKnown RBP3.24□□□□□ -1.89
VMP1-208ENST00000588617 SLC25A4P12235 298 aa3.24□□□□□ -1.89
VMP1-208ENST00000588617 BLCAPP62952 87 aa3.24□□□□□ -1.89
VMP1-208ENST00000588617 DIAPH2-AS1Q14236 149 aa3.24□□□□□ -1.89
VMP1-208ENST00000588617 CST11Q9H112 138 aa3.24□□□□□ -1.89
VMP1-208ENST00000588617 BRCA2P51587 3418 aa3.23□□□□□ -1.89
VMP1-208ENST00000588617 POLEQ07864 2286 aa3.23□□□□□ -1.89
VMP1-208ENST00000588617 M0R2Z0 102 aa3.23□□□□□ -1.89
VMP1-208ENST00000588617 SMIM24O75264 130 aa3.23□□□□□ -1.89
VMP1-208ENST00000588617 EVI2AP22794 236 aa3.23□□□□□ -1.89
VMP1-208ENST00000588617 FAM74A1Q5RGS3 127 aa3.23□□□□□ -1.89
VMP1-208ENST00000588617 KRTAP13-1Q8IUC0 172 aa3.23□□□□□ -1.89
VMP1-208ENST00000588617 PATE1Q8WXA2 126 aa3.23□□□□□ -1.89
VMP1-208ENST00000588617 PSMF1Q92530 271 aa3.23□□□□□ -1.89
VMP1-208ENST00000588617 NABP2Q9BQ15 211 aa3.23□□□□□ -1.89
VMP1-208ENST00000588617 DNAH12Q6ZR08 3092 aa3.23□□□□□ -1.89
VMP1-208ENST00000588617 CCL16O15467 120 aa3.22□□□□□ -1.89
VMP1-208ENST00000588617 MMGT1Q8N4V1 131 aa3.22□□□□□ -1.89
VMP1-208ENST00000588617 CDC42SE1Q9NRR8 79 aa3.22□□□□□ -1.89
VMP1-208ENST00000588617 MED9Q9NWA0 146 aa3.22□□□□□ -1.89
VMP1-208ENST00000588617 ORMDL1Q9P0S3 153 aa3.22□□□□□ -1.89
VMP1-208ENST00000588617 SCN3AQ9NY46 2000 aa3.22□□□□□ -1.89
VMP1-208ENST00000588617 CEP350Q5VT06 3117 aa3.22□□□□□ -1.89
VMP1-208ENST00000588617 ZFC3H1O60293 1989 aaKnown RBP3.21□□□□□ -1.89
VMP1-208ENST00000588617 SIP14410 1827 aa3.21□□□□□ -1.89
VMP1-208ENST00000588617 C3orf85A0A1B0GTC6 90 aa3.21□□□□□ -1.9
VMP1-208ENST00000588617 QRFPP83859 136 aa3.21□□□□□ -1.9
VMP1-208ENST00000588617 KRTAP26-1Q6PEX3 210 aa3.21□□□□□ -1.9
VMP1-208ENST00000588617 GLIPR1L1Q6UWM5 242 aa3.21□□□□□ -1.9
VMP1-208ENST00000588617 TEN1Q86WV5 123 aa3.21□□□□□ -1.9
VMP1-208ENST00000588617 LINC00269Q8N2A0 174 aa3.21□□□□□ -1.9
VMP1-208ENST00000588617 LINC00052Q96N35 136 aa3.21□□□□□ -1.9
VMP1-208ENST00000588617 CEP192Q8TEP8 1941 aa3.21□□□□□ -1.9
VMP1-208ENST00000588617 ALPK2Q86TB3 2170 aa3.2□□□□□ -1.9
VMP1-208ENST00000588617 A0A096LPI6 279 aa3.2□□□□□ -1.9
VMP1-208ENST00000588617 F8W1H4 67 aa3.2□□□□□ -1.9
VMP1-208ENST00000588617 PLXNB2O15031 1838 aa3.2□□□□□ -1.9
VMP1-208ENST00000588617 ZNF727A8MUV8 499 aa3.19□□□□□ -1.9
VMP1-208ENST00000588617 NDUFA2O43678 99 aa3.19□□□□□ -1.9
VMP1-208ENST00000588617 HIST1H1BP16401 226 aaKnown RBP3.19□□□□□ -1.9
VMP1-208ENST00000588617 SNRPD3P62318 126 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms