RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 FAM231CP0DMU5 169 aa14.09□□□□□ -0.15
DDX39A-207ENST00000588542 S100A4P26447 101 aaKnown RBP14.09□□□□□ -0.15
DDX39A-207ENST00000588542 GNG4P50150 75 aa14.09□□□□□ -0.15
DDX39A-207ENST00000588542 TOR2AQ5JU69 321 aa14.09□□□□□ -0.15
DDX39A-207ENST00000588542 PRR27Q6MZM9 219 aa14.09□□□□□ -0.15
DDX39A-207ENST00000588542 FAM210AQ96ND0 272 aa14.09□□□□□ -0.15
DDX39A-207ENST00000588542 IL36BQ9NZH7 164 aa14.09□□□□□ -0.15
DDX39A-207ENST00000588542 H3BNG1 76 aa14.08□□□□□ -0.16
DDX39A-207ENST00000588542 H3BVH4 76 aa14.08□□□□□ -0.16
DDX39A-207ENST00000588542 NUDT3O95989 172 aa14.08□□□□□ -0.16
DDX39A-207ENST00000588542 RPL19P84098 196 aaKnown RBP14.08□□□□□ -0.16
DDX39A-207ENST00000588542 SMIM12Q96EX1 92 aa14.08□□□□□ -0.16
DDX39A-207ENST00000588542 TMEM250H0YL14 139 aa14.07□□□□□ -0.16
DDX39A-207ENST00000588542 ARMS2P0C7Q2 107 aa14.07□□□□□ -0.16
DDX39A-207ENST00000588542 OR4C5Q8NGB2 326 aa14.07□□□□□ -0.16
DDX39A-207ENST00000588542 RS1O15537 224 aa14.06□□□□□ -0.16
DDX39A-207ENST00000588542 MGST1P10620 155 aaKnown RBP14.06□□□□□ -0.16
DDX39A-207ENST00000588542 CRYBA4P53673 196 aa14.06□□□□□ -0.16
DDX39A-207ENST00000588542 PARLQ9H300 379 aa14.06□□□□□ -0.16
DDX39A-207ENST00000588542 SCRT2Q9NQ03 307 aa14.06□□□□□ -0.16
DDX39A-207ENST00000588542 PRO0255Q9UI72 69 aa14.06□□□□□ -0.16
DDX39A-207ENST00000588542 TRGV4A0A0C4DH28 118 aa14.05□□□□□ -0.16
DDX39A-207ENST00000588542 C19orf71A6NCJ1 209 aa14.05□□□□□ -0.16
DDX39A-207ENST00000588542 NDUFS6O75380 124 aaKnown RBP14.05□□□□□ -0.16
DDX39A-207ENST00000588542 CFAP126Q5VTH2 177 aa14.05□□□□□ -0.16
DDX39A-207ENST00000588542 EIF5A2Q9GZV4 153 aaKnown RBP14.05□□□□□ -0.16
DDX39A-207ENST00000588542 HHLA3Q9XRX5 114 aa14.05□□□□□ -0.16
DDX39A-207ENST00000588542 PAX4O43316 350 aa14.04□□□□□ -0.16
DDX39A-207ENST00000588542 CXCL1P09341 107 aa14.04□□□□□ -0.16
DDX39A-207ENST00000588542 SLAQ13239 276 aa14.04□□□□□ -0.16
DDX39A-207ENST00000588542 RNF212Q495C1 297 aa14.04□□□□□ -0.16
DDX39A-207ENST00000588542 PIK3CD-AS1Q5SR53 167 aa14.04□□□□□ -0.16
DDX39A-207ENST00000588542 A0A096LPF7 62 aa14.03□□□□□ -0.16
DDX39A-207ENST00000588542 DMRTA1Q5VZB9 504 aa14.03□□□□□ -0.16
DDX39A-207ENST00000588542 SRP19P09132 144 aaKnown RBP14.02□□□□□ -0.17
DDX39A-207ENST00000588542 OCC1Q8TAD7 63 aa14.02□□□□□ -0.17
DDX39A-207ENST00000588542 K7EN84 100 aa14.01□□□□□ -0.17
DDX39A-207ENST00000588542 MED14OSP0DP75 135 aa14.01□□□□□ -0.17
DDX39A-207ENST00000588542 GATA1P15976 413 aaPredicted RBP14.01□□□□□ -0.17
DDX39A-207ENST00000588542 UBE2DNLQ8IWF7 75 aa14.01□□□□□ -0.17
DDX39A-207ENST00000588542 JPT2Q9H910 190 aa14.01□□□□□ -0.17
DDX39A-207ENST00000588542 PHLDA3Q9Y5J5 127 aa14.01□□□□□ -0.17
DDX39A-207ENST00000588542 DNAH10Q8IVF4 4471 aa14□□□□□ -0.17
DDX39A-207ENST00000588542 CIDEAO60543 219 aa14□□□□□ -0.17
DDX39A-207ENST00000588542 CEBPGP53567 150 aa14□□□□□ -0.17
DDX39A-207ENST00000588542 DAZAP1Q96EP5 407 aaKnown RBP14□□□□□ -0.17
DDX39A-207ENST00000588542 SSBP4Q9BWG4 385 aaPredicted RBP14□□□□□ -0.17
DDX39A-207ENST00000588542 LINC00588Q9Y4M8 146 aa14□□□□□ -0.17
DDX39A-207ENST00000588542 IGHV3-73A0A0B4J1V6 119 aa13.99□□□□□ -0.17
DDX39A-207ENST00000588542 A8MWV9 139 aa13.99□□□□□ -0.17
DDX39A-207ENST00000588542 SNAI2O43623 268 aa13.99□□□□□ -0.17
DDX39A-207ENST00000588542 SYT8Q8NBV8 401 aa13.99□□□□□ -0.17
DDX39A-207ENST00000588542 BIN3Q9NQY0 253 aa13.99□□□□□ -0.17
DDX39A-207ENST00000588542 ICOSQ9Y6W8 199 aa13.99□□□□□ -0.17
DDX39A-207ENST00000588542 FRAS1Q86XX4 4008 aa13.98□□□□□ -0.17
DDX39A-207ENST00000588542 DNAH2Q9P225 4427 aa13.98□□□□□ -0.17
DDX39A-207ENST00000588542 C9JQL5 133 aa13.98□□□□□ -0.17
DDX39A-207ENST00000588542 GZMBP10144 247 aa13.98□□□□□ -0.17
DDX39A-207ENST00000588542 SRSF3P84103 164 aaKnown RBP13.98□□□□□ -0.17
DDX39A-207ENST00000588542 ESRGQ1W209 222 aa13.98□□□□□ -0.17
DDX39A-207ENST00000588542 UFSP1Q6NVU6 142 aa13.98□□□□□ -0.17
DDX39A-207ENST00000588542 NUDT10Q8NFP7 164 aa13.98□□□□□ -0.17
DDX39A-207ENST00000588542 OR2D3Q8NGH3 330 aa13.98□□□□□ -0.17
DDX39A-207ENST00000588542 NUDT11Q96G61 164 aa13.98□□□□□ -0.17
DDX39A-207ENST00000588542 SAMD10Q9BYL1 202 aa13.98□□□□□ -0.17
DDX39A-207ENST00000588542 M0R381 172 aa13.97□□□□□ -0.17
DDX39A-207ENST00000588542 NXPH4O95158 308 aa13.97□□□□□ -0.17
DDX39A-207ENST00000588542 P01737 135 aa13.97□□□□□ -0.17
DDX39A-207ENST00000588542 OR5AL1P0C617 328 aa13.97□□□□□ -0.17
DDX39A-207ENST00000588542 CCL18P55774 89 aa13.97□□□□□ -0.17
DDX39A-207ENST00000588542 ZFP2Q6ZN57 461 aa13.97□□□□□ -0.17
DDX39A-207ENST00000588542 ZFP82Q8N141 532 aa13.97□□□□□ -0.17
DDX39A-207ENST00000588542 OR10AG1Q8NH19 301 aa13.97□□□□□ -0.17
DDX39A-207ENST00000588542 SFRP2Q96HF1 295 aa13.97□□□□□ -0.17
DDX39A-207ENST00000588542 LOC100131303A0A0U1RQF7 123 aa13.96□□□□□ -0.17
DDX39A-207ENST00000588542 K7EQD1 137 aa13.96□□□□□ -0.17
DDX39A-207ENST00000588542 IGLC6P0CF74 106 aa13.96□□□□□ -0.17
DDX39A-207ENST00000588542 GYPEP15421 78 aa13.96□□□□□ -0.17
DDX39A-207ENST00000588542 FAM3BP58499 235 aaPredicted RBP13.96□□□□□ -0.17
DDX39A-207ENST00000588542 RPS20P60866 119 aaKnown RBP13.96□□□□□ -0.17
DDX39A-207ENST00000588542 MRPL23Q16540 153 aaKnown RBP13.96□□□□□ -0.17
DDX39A-207ENST00000588542 Q6ZSN1 163 aa13.96□□□□□ -0.17
DDX39A-207ENST00000588542 SLC25A29Q8N8R3 303 aa13.96□□□□□ -0.17
DDX39A-207ENST00000588542 SMIM7Q9BQ49 75 aa13.96□□□□□ -0.17
DDX39A-207ENST00000588542 RNASE7Q9H1E1 156 aaKnown RBP13.96□□□□□ -0.17
DDX39A-207ENST00000588542 ZNRF2Q8NHG8 242 aa13.95□□□□□ -0.18
DDX39A-207ENST00000588542 LY96Q9Y6Y9 160 aa13.95□□□□□ -0.18
DDX39A-207ENST00000588542 MUC21A0A0G2JKD1 596 aa13.94□□□□□ -0.18
DDX39A-207ENST00000588542 MUC21A0A140T8X8 626 aa13.94□□□□□ -0.18
DDX39A-207ENST00000588542 TRBV6-4A0A1B0GX49 114 aa13.94□□□□□ -0.18
DDX39A-207ENST00000588542 ZNF727A8MUV8 499 aa13.94□□□□□ -0.18
DDX39A-207ENST00000588542 CRYGDP07320 174 aa13.94□□□□□ -0.18
DDX39A-207ENST00000588542 IFITM2Q01629 132 aa13.94□□□□□ -0.18
DDX39A-207ENST00000588542 PEA15Q15121 130 aa13.93□□□□□ -0.18
DDX39A-207ENST00000588542 IGLV2-18A0A075B6J9 118 aa13.92□□□□□ -0.18
DDX39A-207ENST00000588542 A0A087WWL8 130 aa13.92□□□□□ -0.18
DDX39A-207ENST00000588542 RHOHQ15669 191 aa13.92□□□□□ -0.18
DDX39A-207ENST00000588542 NEGR1Q7Z3B1 354 aa13.92□□□□□ -0.18
DDX39A-207ENST00000588542 LINC01551Q86U37 167 aa13.92□□□□□ -0.18
DDX39A-207ENST00000588542 FER1L6-AS1Q8NA97 138 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 166.6 ms