RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 PGPEP1LA6NFU8 196 aa16.02■□□□□ 0.16
LIMD2-204ENST00000578297 M0R036 132 aa16.02■□□□□ 0.16
LIMD2-204ENST00000578297 TAGLN2P37802 199 aaKnown RBP16.02■□□□□ 0.16
LIMD2-204ENST00000578297 ZNF506Q5JVG8 444 aa16.02■□□□□ 0.16
LIMD2-204ENST00000578297 ZNF575Q86XF7 245 aa16.02■□□□□ 0.16
LIMD2-204ENST00000578297 DERL1Q9BUN8 251 aa16.02■□□□□ 0.16
LIMD2-204ENST00000578297 VAX2Q9UIW0 290 aa16.02■□□□□ 0.16
LIMD2-204ENST00000578297 ICOSQ9Y6W8 199 aa16.02■□□□□ 0.16
LIMD2-204ENST00000578297 DNAH10Q8IVF4 4471 aa16.01■□□□□ 0.15
LIMD2-204ENST00000578297 CIDEAO60543 219 aa16.01■□□□□ 0.15
LIMD2-204ENST00000578297 ESRGQ1W209 222 aa16.01■□□□□ 0.15
LIMD2-204ENST00000578297 PIK3CD-AS1Q5SR53 167 aa16.01■□□□□ 0.15
LIMD2-204ENST00000578297 ZNRF2Q8NHG8 242 aa16.01■□□□□ 0.15
LIMD2-204ENST00000578297 IGLV2-18A0A075B6J9 118 aa16■□□□□ 0.15
LIMD2-204ENST00000578297 RS1O15537 224 aa16■□□□□ 0.15
LIMD2-204ENST00000578297 CFAP126Q5VTH2 177 aa16■□□□□ 0.15
LIMD2-204ENST00000578297 LYPD6BQ8NI32 183 aa16■□□□□ 0.15
LIMD2-204ENST00000578297 FRAS1Q86XX4 4008 aa15.99■□□□□ 0.15
LIMD2-204ENST00000578297 M0R2N4 97 aa15.99■□□□□ 0.15
LIMD2-204ENST00000578297 GRIFINA4D1Z8 144 aa15.98■□□□□ 0.15
LIMD2-204ENST00000578297 H3BVH4 76 aa15.98■□□□□ 0.15
LIMD2-204ENST00000578297 MRPL23Q16540 153 aaKnown RBP15.98■□□□□ 0.15
LIMD2-204ENST00000578297 Q6ZR54 194 aa15.98■□□□□ 0.15
LIMD2-204ENST00000578297 ARMS2P0C7Q2 107 aa15.97■□□□□ 0.15
LIMD2-204ENST00000578297 GATA1P15976 413 aaPredicted RBP15.97■□□□□ 0.15
LIMD2-204ENST00000578297 UPK3BQ9BT76 320 aa15.97■□□□□ 0.15
LIMD2-204ENST00000578297 MED9Q9NWA0 146 aa15.97■□□□□ 0.15
LIMD2-204ENST00000578297 TMSB15BA0A087X1C1 80 aa15.96■□□□□ 0.15
LIMD2-204ENST00000578297 K7EQD1 137 aa15.96■□□□□ 0.15
LIMD2-204ENST00000578297 CENPWQ5EE01 88 aa15.96■□□□□ 0.15
LIMD2-204ENST00000578297 SMIM12Q96EX1 92 aa15.96■□□□□ 0.15
LIMD2-204ENST00000578297 SCRT2Q9NQ03 307 aa15.96■□□□□ 0.15
LIMD2-204ENST00000578297 MRPS16Q9Y3D3 137 aaKnown RBP15.96■□□□□ 0.15
LIMD2-204ENST00000578297 DNAH2Q9P225 4427 aa15.96■□□□□ 0.15
LIMD2-204ENST00000578297 EPPK1P58107 5090 aaKnown RBP15.96■□□□□ 0.15
LIMD2-204ENST00000578297 A8MWV9 139 aa15.95■□□□□ 0.14
LIMD2-204ENST00000578297 IGLV2-8P01709 118 aa15.95■□□□□ 0.14
LIMD2-204ENST00000578297 PRR27Q6MZM9 219 aa15.95■□□□□ 0.14
LIMD2-204ENST00000578297 PCNPQ8WW12 178 aaKnown RBP15.95■□□□□ 0.14
LIMD2-204ENST00000578297 RAB19A4D1S5 217 aa15.94■□□□□ 0.14
LIMD2-204ENST00000578297 CXCL1P09341 107 aa15.94■□□□□ 0.14
LIMD2-204ENST00000578297 GYPEP15421 78 aa15.94■□□□□ 0.14
LIMD2-204ENST00000578297 GNG4P50150 75 aa15.94■□□□□ 0.14
LIMD2-204ENST00000578297 DMRTA1Q5VZB9 504 aa15.94■□□□□ 0.14
LIMD2-204ENST00000578297 NEGR1Q7Z3B1 354 aa15.94■□□□□ 0.14
LIMD2-204ENST00000578297 SYT8Q8NBV8 401 aa15.94■□□□□ 0.14
LIMD2-204ENST00000578297 Q9H8V8 135 aa15.94■□□□□ 0.14
LIMD2-204ENST00000578297 SRIP30626 198 aa15.93■□□□□ 0.14
LIMD2-204ENST00000578297 PARLQ9H300 379 aa15.93■□□□□ 0.14
LIMD2-204ENST00000578297 PHLDA3Q9Y5J5 127 aa15.93■□□□□ 0.14
LIMD2-204ENST00000578297 TRBV6-4A0A1B0GX49 114 aa15.92■□□□□ 0.14
LIMD2-204ENST00000578297 RBFOX3A6NFN3 312 aa15.92■□□□□ 0.14
LIMD2-204ENST00000578297 MED14OSP0DP75 135 aa15.92■□□□□ 0.14
LIMD2-204ENST00000578297 RPL19P84098 196 aaKnown RBP15.92■□□□□ 0.14
LIMD2-204ENST00000578297 ZFP2Q6ZN57 461 aa15.92■□□□□ 0.14
LIMD2-204ENST00000578297 SLC25A29Q8N8R3 303 aa15.92■□□□□ 0.14
LIMD2-204ENST00000578297 TRBV20OR9-2A0A075B6H5 130 aa15.91■□□□□ 0.14
LIMD2-204ENST00000578297 IGHV3-73A0A0B4J1V6 119 aa15.91■□□□□ 0.14
LIMD2-204ENST00000578297 NBDYA0A0U1RRE5 68 aa15.91■□□□□ 0.14
LIMD2-204ENST00000578297 MGST1P10620 155 aaKnown RBP15.91■□□□□ 0.14
LIMD2-204ENST00000578297 LYPD5Q6UWN5 251 aa15.91■□□□□ 0.14
LIMD2-204ENST00000578297 JPT2Q9H910 190 aa15.9■□□□□ 0.14
LIMD2-204ENST00000578297 LOC100131303A0A0U1RQF7 123 aa15.89■□□□□ 0.13
LIMD2-204ENST00000578297 RHOHQ15669 191 aa15.89■□□□□ 0.13
LIMD2-204ENST00000578297 UFSP1Q6NVU6 142 aa15.89■□□□□ 0.13
LIMD2-204ENST00000578297 LINC00336Q6ZUF6 198 aa15.89■□□□□ 0.13
LIMD2-204ENST00000578297 SH2D6Q7Z4S9 175 aa15.89■□□□□ 0.13
LIMD2-204ENST00000578297 ZFP82Q8N141 532 aa15.89■□□□□ 0.13
LIMD2-204ENST00000578297 DAZAP1Q96EP5 407 aaKnown RBP15.89■□□□□ 0.13
LIMD2-204ENST00000578297 PRADC1Q9BSG0 188 aa15.89■□□□□ 0.13
LIMD2-204ENST00000578297 C19orf71A6NCJ1 209 aa15.88■□□□□ 0.13
LIMD2-204ENST00000578297 TMEM250H0YL14 139 aa15.88■□□□□ 0.13
LIMD2-204ENST00000578297 M0R381 172 aa15.88■□□□□ 0.13
LIMD2-204ENST00000578297 SFRP2Q96HF1 295 aa15.88■□□□□ 0.13
LIMD2-204ENST00000578297 SSBP4Q9BWG4 385 aaPredicted RBP15.88■□□□□ 0.13
LIMD2-204ENST00000578297 SAMD10Q9BYL1 202 aa15.88■□□□□ 0.13
LIMD2-204ENST00000578297 BIN3Q9NQY0 253 aa15.88■□□□□ 0.13
LIMD2-204ENST00000578297 RTL8CO15255 209 aa15.87■□□□□ 0.13
LIMD2-204ENST00000578297 SNAI2O43623 268 aa15.87■□□□□ 0.13
LIMD2-204ENST00000578297 RHODO00212 210 aa15.86■□□□□ 0.13
LIMD2-204ENST00000578297 OR5AL1P0C617 328 aa15.86■□□□□ 0.13
LIMD2-204ENST00000578297 C1orf134Q5TEV5 83 aa15.86■□□□□ 0.13
LIMD2-204ENST00000578297 TEX261Q6UWH6 196 aa15.86■□□□□ 0.13
LIMD2-204ENST00000578297 Q6ZSN1 163 aa15.86■□□□□ 0.13
LIMD2-204ENST00000578297 FAT2Q9NYQ8 4349 aa15.86■□□□□ 0.13
LIMD2-204ENST00000578297 NDUFS6O75380 124 aaKnown RBP15.85■□□□□ 0.13
LIMD2-204ENST00000578297 NXPH4O95158 308 aa15.85■□□□□ 0.13
LIMD2-204ENST00000578297 TTC32Q5I0X7 151 aa15.85■□□□□ 0.13
LIMD2-204ENST00000578297 SOHLH1Q5JUK2 328 aa15.85■□□□□ 0.13
LIMD2-204ENST00000578297 FAM210AQ96ND0 272 aa15.85■□□□□ 0.13
LIMD2-204ENST00000578297 DNAH17Q9UFH2 4485 aa15.85■□□□□ 0.13
LIMD2-204ENST00000578297 CRYGDP07320 174 aa15.84■□□□□ 0.13
LIMD2-204ENST00000578297 RPS20P60866 119 aaKnown RBP15.84■□□□□ 0.13
LIMD2-204ENST00000578297 TOR2AQ5JU69 321 aa15.84■□□□□ 0.13
LIMD2-204ENST00000578297 OR2D3Q8NGH3 330 aa15.84■□□□□ 0.13
LIMD2-204ENST00000578297 OR10AG1Q8NH19 301 aa15.84■□□□□ 0.13
LIMD2-204ENST00000578297 EIF5A2Q9GZV4 153 aaKnown RBP15.84■□□□□ 0.13
LIMD2-204ENST00000578297 A0A1W2PPQ1 181 aa15.83■□□□□ 0.12
LIMD2-204ENST00000578297 SIVA1O15304 175 aa15.83■□□□□ 0.12
LIMD2-204ENST00000578297 P01737 135 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms