RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 ASIPP42127 132 aa6.91□□□□□ -1.3
CDH1-206ENST00000564676 CRIP1P50238 77 aa6.91□□□□□ -1.3
CDH1-206ENST00000564676 CRYBA4P53673 196 aa6.91□□□□□ -1.3
CDH1-206ENST00000564676 ZNF876PQ49A33 203 aa6.91□□□□□ -1.3
CDH1-206ENST00000564676 COX8CQ7Z4L0 72 aa6.91□□□□□ -1.3
CDH1-206ENST00000564676 BAGE2Q86Y30 109 aa6.91□□□□□ -1.3
CDH1-206ENST00000564676 NHLRC2Q8NBF2 726 aa6.91□□□□□ -1.3
CDH1-206ENST00000564676 C9orf85Q96MD7 179 aa6.91□□□□□ -1.3
CDH1-206ENST00000564676 LINC00588Q9Y4M8 146 aa6.91□□□□□ -1.3
CDH1-206ENST00000564676 ICOSQ9Y6W8 199 aa6.91□□□□□ -1.3
CDH1-206ENST00000564676 A0A096LPF7 62 aa6.9□□□□□ -1.3
CDH1-206ENST00000564676 PGPEP1LA6NFU8 196 aa6.9□□□□□ -1.3
CDH1-206ENST00000564676 RNASE3P12724 160 aaKnown RBP6.9□□□□□ -1.3
CDH1-206ENST00000564676 ESRGQ1W209 222 aa6.9□□□□□ -1.3
CDH1-206ENST00000564676 ZNF674Q2M3X9 581 aa6.9□□□□□ -1.3
CDH1-206ENST00000564676 ALKAL2Q6UX46 152 aa6.9□□□□□ -1.3
CDH1-206ENST00000564676 PCNPQ8WW12 178 aaKnown RBP6.9□□□□□ -1.3
CDH1-206ENST00000564676 TXNDC17Q9BRA2 123 aa6.9□□□□□ -1.3
CDH1-206ENST00000564676 TMSB15BA0A087X1C1 80 aa6.89□□□□□ -1.31
CDH1-206ENST00000564676 GRIFINA4D1Z8 144 aa6.89□□□□□ -1.31
CDH1-206ENST00000564676 KRBOX1C9JBD0 128 aa6.89□□□□□ -1.31
CDH1-206ENST00000564676 H3BVH4 76 aa6.89□□□□□ -1.31
CDH1-206ENST00000564676 RPL35P42766 123 aaKnown RBP6.89□□□□□ -1.31
CDH1-206ENST00000564676 BLOC1S1P78537 153 aa6.89□□□□□ -1.31
CDH1-206ENST00000564676 MEF2BQ02080 365 aaPredicted RBP6.89□□□□□ -1.31
CDH1-206ENST00000564676 MRPL23Q16540 153 aaKnown RBP6.89□□□□□ -1.31
CDH1-206ENST00000564676 ZNF506Q5JVG8 444 aa6.89□□□□□ -1.31
CDH1-206ENST00000564676 ZNRF2Q8NHG8 242 aa6.89□□□□□ -1.31
CDH1-206ENST00000564676 C11orf52Q96A22 123 aa6.89□□□□□ -1.31
CDH1-206ENST00000564676 PTH2Q96A98 100 aa6.89□□□□□ -1.31
CDH1-206ENST00000564676 EPPK1P58107 5090 aaKnown RBP6.88□□□□□ -1.31
CDH1-206ENST00000564676 IGHV3-73A0A0B4J1V6 119 aa6.88□□□□□ -1.31
CDH1-206ENST00000564676 RS1O15537 224 aa6.88□□□□□ -1.31
CDH1-206ENST00000564676 PDE6DO43924 150 aa6.88□□□□□ -1.31
CDH1-206ENST00000564676 ARMS2P0C7Q2 107 aa6.88□□□□□ -1.31
CDH1-206ENST00000564676 BCL2P10415 239 aa6.88□□□□□ -1.31
CDH1-206ENST00000564676 GYPEP15421 78 aa6.88□□□□□ -1.31
CDH1-206ENST00000564676 CFAP126Q5VTH2 177 aa6.88□□□□□ -1.31
CDH1-206ENST00000564676 PRR27Q6MZM9 219 aa6.88□□□□□ -1.31
CDH1-206ENST00000564676 Q9H8V8 135 aa6.88□□□□□ -1.31
CDH1-206ENST00000564676 MED9Q9NWA0 146 aa6.88□□□□□ -1.31
CDH1-206ENST00000564676 IL36BQ9NZH7 164 aa6.88□□□□□ -1.31
CDH1-206ENST00000564676 VAX2Q9UIW0 290 aa6.88□□□□□ -1.31
CDH1-206ENST00000564676 A8MWV9 139 aa6.87□□□□□ -1.31
CDH1-206ENST00000564676 K7EQD1 137 aa6.87□□□□□ -1.31
CDH1-206ENST00000564676 CIDEAO60543 219 aa6.87□□□□□ -1.31
CDH1-206ENST00000564676 MGST1P10620 155 aaKnown RBP6.87□□□□□ -1.31
CDH1-206ENST00000564676 SRIP30626 198 aa6.87□□□□□ -1.31
CDH1-206ENST00000564676 TAGLN2P37802 199 aaKnown RBP6.87□□□□□ -1.31
CDH1-206ENST00000564676 CENPWQ5EE01 88 aa6.87□□□□□ -1.31
CDH1-206ENST00000564676 DNLZQ5SXM8 178 aa6.87□□□□□ -1.31
CDH1-206ENST00000564676 Q6ZR54 194 aa6.87□□□□□ -1.31
CDH1-206ENST00000564676 NEGR1Q7Z3B1 354 aa6.87□□□□□ -1.31
CDH1-206ENST00000564676 SYT8Q8NBV8 401 aa6.87□□□□□ -1.31
CDH1-206ENST00000564676 DERL1Q9BUN8 251 aa6.87□□□□□ -1.31
CDH1-206ENST00000564676 MLST8Q9BVC4 326 aa6.87□□□□□ -1.31
CDH1-206ENST00000564676 MRPS16Q9Y3D3 137 aaKnown RBP6.87□□□□□ -1.31
CDH1-206ENST00000564676 PHLDA3Q9Y5J5 127 aa6.87□□□□□ -1.31
CDH1-206ENST00000564676 BIRC6Q9NR09 4857 aa6.86□□□□□ -1.31
CDH1-206ENST00000564676 NBDYA0A0U1RRE5 68 aa6.86□□□□□ -1.31
CDH1-206ENST00000564676 RAB19A4D1S5 217 aa6.86□□□□□ -1.31
CDH1-206ENST00000564676 GATA1P15976 413 aaPredicted RBP6.86□□□□□ -1.31
CDH1-206ENST00000564676 GNG4P50150 75 aa6.86□□□□□ -1.31
CDH1-206ENST00000564676 RPL19P84098 196 aaKnown RBP6.86□□□□□ -1.31
CDH1-206ENST00000564676 SOHLH1Q5JUK2 328 aa6.86□□□□□ -1.31
CDH1-206ENST00000564676 PIK3CD-AS1Q5SR53 167 aa6.86□□□□□ -1.31
CDH1-206ENST00000564676 DAZAP1Q96EP5 407 aaKnown RBP6.86□□□□□ -1.31
CDH1-206ENST00000564676 PRADC1Q9BSG0 188 aa6.86□□□□□ -1.31
CDH1-206ENST00000564676 UPK3BQ9BT76 320 aa6.86□□□□□ -1.31
CDH1-206ENST00000564676 LOC100131303A0A0U1RQF7 123 aa6.85□□□□□ -1.31
CDH1-206ENST00000564676 M0R381 172 aa6.85□□□□□ -1.31
CDH1-206ENST00000564676 RHOHQ15669 191 aa6.85□□□□□ -1.31
CDH1-206ENST00000564676 C1orf134Q5TEV5 83 aa6.85□□□□□ -1.31
CDH1-206ENST00000564676 LYPD5Q6UWN5 251 aa6.85□□□□□ -1.31
CDH1-206ENST00000564676 LINC00336Q6ZUF6 198 aa6.85□□□□□ -1.31
CDH1-206ENST00000564676 ZFP82Q8N141 532 aa6.85□□□□□ -1.31
CDH1-206ENST00000564676 SLC25A29Q8N8R3 303 aa6.85□□□□□ -1.31
CDH1-206ENST00000564676 PARLQ9H300 379 aa6.85□□□□□ -1.31
CDH1-206ENST00000564676 DNAH17Q9UFH2 4485 aa6.84□□□□□ -1.31
CDH1-206ENST00000564676 TRBV6-4A0A1B0GX49 114 aa6.84□□□□□ -1.31
CDH1-206ENST00000564676 RBFOX3A6NFN3 312 aa6.84□□□□□ -1.31
CDH1-206ENST00000564676 NXPH4O95158 308 aa6.84□□□□□ -1.31
CDH1-206ENST00000564676 ZFP2Q6ZN57 461 aa6.84□□□□□ -1.31
CDH1-206ENST00000564676 SH2D6Q7Z4S9 175 aa6.84□□□□□ -1.31
CDH1-206ENST00000564676 ZNF575Q86XF7 245 aa6.84□□□□□ -1.31
CDH1-206ENST00000564676 SAMD10Q9BYL1 202 aa6.84□□□□□ -1.31
CDH1-206ENST00000564676 JPT2Q9H910 190 aa6.84□□□□□ -1.31
CDH1-206ENST00000564676 SCRT2Q9NQ03 307 aa6.84□□□□□ -1.31
CDH1-206ENST00000564676 BIN3Q9NQY0 253 aa6.84□□□□□ -1.31
CDH1-206ENST00000564676 DNAH2Q9P225 4427 aa6.83□□□□□ -1.32
CDH1-206ENST00000564676 PRSS29PA6NIE9 313 aa6.83□□□□□ -1.32
CDH1-206ENST00000564676 RHODO00212 210 aa6.83□□□□□ -1.32
CDH1-206ENST00000564676 RTL8CO15255 209 aa6.83□□□□□ -1.32
CDH1-206ENST00000564676 SIVA1O15304 175 aa6.83□□□□□ -1.32
CDH1-206ENST00000564676 IGLV2-8P01709 118 aa6.83□□□□□ -1.32
CDH1-206ENST00000564676 CXCL1P09341 107 aa6.83□□□□□ -1.32
CDH1-206ENST00000564676 MED14OSP0DP75 135 aa6.83□□□□□ -1.32
CDH1-206ENST00000564676 TTC32Q5I0X7 151 aa6.83□□□□□ -1.32
CDH1-206ENST00000564676 FAM74A4Q5TZK3 123 aa6.83□□□□□ -1.32
CDH1-206ENST00000564676 LYPD6BQ8NI32 183 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms