RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 SMIM17P0DL12 118 aa2.62□□□□□ -1.99
MTHFD1-216ENST00000557539 COX4I1P13073 169 aa2.62□□□□□ -1.99
MTHFD1-216ENST00000557539 CBR1P16152 277 aa2.62□□□□□ -1.99
MTHFD1-216ENST00000557539 HIST1H2BOP23527 126 aa2.62□□□□□ -1.99
MTHFD1-216ENST00000557539 HIST1H2BBP33778 126 aa2.62□□□□□ -1.99
MTHFD1-216ENST00000557539 HIST1H2BDP58876 126 aa2.62□□□□□ -1.99
MTHFD1-216ENST00000557539 HIST1H2BCP62807 126 aa2.62□□□□□ -1.99
MTHFD1-216ENST00000557539 AKR1C1Q04828 323 aa2.62□□□□□ -1.99
MTHFD1-216ENST00000557539 HIST2H2BEQ16778 126 aa2.62□□□□□ -1.99
MTHFD1-216ENST00000557539 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.62□□□□□ -1.99
MTHFD1-216ENST00000557539 AAED1Q7RTV5 226 aa2.62□□□□□ -1.99
MTHFD1-216ENST00000557539 SMIM20Q8N5G0 67 aa2.62□□□□□ -1.99
MTHFD1-216ENST00000557539 OR5J2Q8NH18 312 aa2.62□□□□□ -1.99
MTHFD1-216ENST00000557539 OR13C6PQ8NH95 151 aa2.62□□□□□ -1.99
MTHFD1-216ENST00000557539 CMTM2Q8TAZ6 248 aa2.62□□□□□ -1.99
MTHFD1-216ENST00000557539 HIST1H2BHQ93079 126 aa2.62□□□□□ -1.99
MTHFD1-216ENST00000557539 HIST1H2BNQ99877 126 aa2.62□□□□□ -1.99
MTHFD1-216ENST00000557539 HIST1H2BMQ99879 126 aa2.62□□□□□ -1.99
MTHFD1-216ENST00000557539 CACYBPQ9HB71 228 aaKnown RBP2.62□□□□□ -1.99
MTHFD1-216ENST00000557539 TP73-AS1Q9UF72 201 aa2.62□□□□□ -1.99
MTHFD1-216ENST00000557539 CYSLTR1Q9Y271 337 aa2.62□□□□□ -1.99
MTHFD1-216ENST00000557539 IGLV3-9A0A075B6K5 115 aa2.61□□□□□ -1.99
MTHFD1-216ENST00000557539 ARRDC5A6NEK1 342 aa2.61□□□□□ -1.99
MTHFD1-216ENST00000557539 TMEM235A6NFC5 223 aa2.61□□□□□ -1.99
MTHFD1-216ENST00000557539 UBL3O95164 117 aa2.61□□□□□ -1.99
MTHFD1-216ENST00000557539 HLA-DMBP28068 263 aa2.61□□□□□ -1.99
MTHFD1-216ENST00000557539 FXYD6P3P58550 94 aa2.61□□□□□ -1.99
MTHFD1-216ENST00000557539 NCALDP61601 193 aa2.61□□□□□ -1.99
MTHFD1-216ENST00000557539 GNG3P63215 75 aa2.61□□□□□ -1.99
MTHFD1-216ENST00000557539 CCL20P78556 96 aa2.61□□□□□ -1.99
MTHFD1-216ENST00000557539 RPL18Q07020 188 aaKnown RBP2.61□□□□□ -1.99
MTHFD1-216ENST00000557539 MIAQ16674 131 aa2.61□□□□□ -1.99
MTHFD1-216ENST00000557539 IBA57Q5T440 356 aaKnown RBP2.61□□□□□ -1.99
MTHFD1-216ENST00000557539 FAM27BQ5VT28 67 aa2.61□□□□□ -1.99
MTHFD1-216ENST00000557539 AADACL3Q5VUY0 350 aa2.61□□□□□ -1.99
MTHFD1-216ENST00000557539 SMIM15Q7Z3B0 74 aa2.61□□□□□ -1.99
MTHFD1-216ENST00000557539 SLC25A40Q8TBP6 338 aa2.61□□□□□ -1.99
MTHFD1-216ENST00000557539 LZICQ8WZA0 190 aa2.61□□□□□ -1.99
MTHFD1-216ENST00000557539 TOMM6Q96B49 74 aa2.61□□□□□ -1.99
MTHFD1-216ENST00000557539 XAGE1AQ9HD64 81 aa2.61□□□□□ -1.99
MTHFD1-216ENST00000557539 SS18L2Q9UHA2 77 aa2.61□□□□□ -1.99
MTHFD1-216ENST00000557539 PRO0461Q9UI25 63 aa2.61□□□□□ -1.99
MTHFD1-216ENST00000557539 UFC1Q9Y3C8 167 aa2.61□□□□□ -1.99
MTHFD1-216ENST00000557539 A0A0J9YX75 114 aa2.6□□□□□ -1.99
MTHFD1-216ENST00000557539 A0A1W2PNM2 257 aa2.6□□□□□ -1.99
MTHFD1-216ENST00000557539 A0A1W2PNN7 141 aa2.6□□□□□ -1.99
MTHFD1-216ENST00000557539 C11orf86A6NJI1 115 aa2.6□□□□□ -1.99
MTHFD1-216ENST00000557539 CPSF4LA6NMK7 179 aaKnown RBP2.6□□□□□ -1.99
MTHFD1-216ENST00000557539 CDC42EP2O14613 210 aa2.6□□□□□ -1.99
MTHFD1-216ENST00000557539 IGKV1-5P01602 117 aa2.6□□□□□ -1.99
MTHFD1-216ENST00000557539 IGLV6-57P01721 117 aa2.6□□□□□ -1.99
MTHFD1-216ENST00000557539 CD14P08571 375 aa2.6□□□□□ -1.99
MTHFD1-216ENST00000557539 SULT1A3P0DMM9 295 aa2.6□□□□□ -1.99
MTHFD1-216ENST00000557539 SULT1A4P0DMN0 295 aa2.6□□□□□ -1.99
MTHFD1-216ENST00000557539 GLRXP35754 106 aa2.6□□□□□ -1.99
MTHFD1-216ENST00000557539 SPCS2Q15005 226 aa2.6□□□□□ -1.99
MTHFD1-216ENST00000557539 DEFB136Q30KP8 78 aa2.6□□□□□ -1.99
MTHFD1-216ENST00000557539 LCE3AQ5TA76 89 aa2.6□□□□□ -1.99
MTHFD1-216ENST00000557539 RPL22L1Q6P5R6 122 aaKnown RBP2.6□□□□□ -1.99
MTHFD1-216ENST00000557539 ZNF705AQ6ZN79 300 aaPredicted RBP2.6□□□□□ -1.99
MTHFD1-216ENST00000557539 AKAP14Q86UN6 197 aa2.6□□□□□ -1.99
MTHFD1-216ENST00000557539 PFN4Q8NHR9 129 aa2.6□□□□□ -1.99
MTHFD1-216ENST00000557539 SLC7A6Q92536 515 aa2.6□□□□□ -1.99
MTHFD1-216ENST00000557539 GINS3Q9BRX5 216 aa2.6□□□□□ -1.99
MTHFD1-216ENST00000557539 DERL1Q9BUN8 251 aa2.6□□□□□ -1.99
MTHFD1-216ENST00000557539 KRTAP2-1Q9BYU5 128 aa2.6□□□□□ -1.99
MTHFD1-216ENST00000557539 MED31Q9Y3C7 131 aa2.6□□□□□ -1.99
MTHFD1-216ENST00000557539 RBM7Q9Y580 266 aaKnown RBP2.6□□□□□ -1.99
MTHFD1-216ENST00000557539 IGKV2-24A0A0C4DH68 120 aa2.59□□□□□ -1.99
MTHFD1-216ENST00000557539 G3V2T6 193 aa2.59□□□□□ -1.99
MTHFD1-216ENST00000557539 G3V3Q6 166 aa2.59□□□□□ -1.99
MTHFD1-216ENST00000557539 ZNF728P0DKX0 622 aa2.59□□□□□ -1.99
MTHFD1-216ENST00000557539 CD24P25063 80 aa2.59□□□□□ -1.99
MTHFD1-216ENST00000557539 SMIM11AP58511 58 aa2.59□□□□□ -1.99
MTHFD1-216ENST00000557539 RHOBP62745 196 aa2.59□□□□□ -1.99
MTHFD1-216ENST00000557539 BLCAPP62952 87 aa2.59□□□□□ -1.99
MTHFD1-216ENST00000557539 GNGT1P63211 74 aa2.59□□□□□ -1.99
MTHFD1-216ENST00000557539 MEF2BQ02080 365 aaPredicted RBP2.59□□□□□ -1.99
MTHFD1-216ENST00000557539 MOGQ16653 247 aa2.59□□□□□ -1.99
MTHFD1-216ENST00000557539 RPL13AP3Q6NVV1 102 aa2.59□□□□□ -1.99
MTHFD1-216ENST00000557539 LINC00322Q6ZN03 302 aaPredicted RBP2.59□□□□□ -1.99
MTHFD1-216ENST00000557539 UBE2DNLQ8IWF7 75 aa2.59□□□□□ -1.99
MTHFD1-216ENST00000557539 LINC00471Q8N535 108 aa2.59□□□□□ -1.99
MTHFD1-216ENST00000557539 C12orf45Q8N5I9 185 aaPredicted RBP2.59□□□□□ -1.99
MTHFD1-216ENST00000557539 H1FXQ92522 213 aaKnown RBP2.59□□□□□ -1.99
MTHFD1-216ENST00000557539 GPR146Q96CH1 333 aa2.59□□□□□ -1.99
MTHFD1-216ENST00000557539 IMMP2LQ96T52 175 aa2.59□□□□□ -1.99
MTHFD1-216ENST00000557539 TRAV27A0A087WT01 109 aa2.58□□□□□ -2
MTHFD1-216ENST00000557539 A0A1B0GV72 72 aa2.58□□□□□ -2
MTHFD1-216ENST00000557539 TCRBV3S1A0A5B6 114 aa2.58□□□□□ -2
MTHFD1-216ENST00000557539 H3BT86 120 aa2.58□□□□□ -2
MTHFD1-216ENST00000557539 KPNA4O00629 521 aaPredicted RBP2.58□□□□□ -2
MTHFD1-216ENST00000557539 GNRH2O43555 120 aa2.58□□□□□ -2
MTHFD1-216ENST00000557539 CTSGP08311 255 aa2.58□□□□□ -2
MTHFD1-216ENST00000557539 IFI30P13284 250 aa2.58□□□□□ -2
MTHFD1-216ENST00000557539 TMEM155Q4W5P6 130 aa2.58□□□□□ -2
MTHFD1-216ENST00000557539 Q6Q795 121 aa2.58□□□□□ -2
MTHFD1-216ENST00000557539 LRRC28Q86X40 367 aaPredicted RBP2.58□□□□□ -2
MTHFD1-216ENST00000557539 DEFB107AQ8IZN7 70 aa2.58□□□□□ -2
MTHFD1-216ENST00000557539 SLC30A7Q8NEW0 376 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms