RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 RNASE3P12724 160 aaKnown RBP8.69□□□□□ -1.02
SLIRP-209ENST00000557342 DNLZQ5SXM8 178 aa8.69□□□□□ -1.02
SLIRP-209ENST00000557342 ZNF479Q96JC4 524 aa8.69□□□□□ -1.02
SLIRP-209ENST00000557342 IL36BQ9NZH7 164 aa8.69□□□□□ -1.02
SLIRP-209ENST00000557342 VAX2Q9UIW0 290 aa8.69□□□□□ -1.02
SLIRP-209ENST00000557342 ICOSQ9Y6W8 199 aa8.69□□□□□ -1.02
SLIRP-209ENST00000557342 A0A096LPF7 62 aa8.68□□□□□ -1.02
SLIRP-209ENST00000557342 M0R036 132 aa8.68□□□□□ -1.02
SLIRP-209ENST00000557342 NDUFS6O75380 124 aaKnown RBP8.68□□□□□ -1.02
SLIRP-209ENST00000557342 RPL35P42766 123 aaKnown RBP8.68□□□□□ -1.02
SLIRP-209ENST00000557342 LINC01559Q495D7 138 aa8.68□□□□□ -1.02
SLIRP-209ENST00000557342 ZNF506Q5JVG8 444 aa8.68□□□□□ -1.02
SLIRP-209ENST00000557342 PIK3CD-AS1Q5SR53 167 aa8.68□□□□□ -1.02
SLIRP-209ENST00000557342 UQCC3Q6UW78 93 aa8.68□□□□□ -1.02
SLIRP-209ENST00000557342 NHLRC2Q8NBF2 726 aa8.68□□□□□ -1.02
SLIRP-209ENST00000557342 MLST8Q9BVC4 326 aa8.68□□□□□ -1.02
SLIRP-209ENST00000557342 LINC00588Q9Y4M8 146 aa8.68□□□□□ -1.02
SLIRP-209ENST00000557342 RBFOX3A6NFN3 312 aa8.67□□□□□ -1.02
SLIRP-209ENST00000557342 RS1O15537 224 aa8.67□□□□□ -1.02
SLIRP-209ENST00000557342 MRPL23Q16540 153 aaKnown RBP8.67□□□□□ -1.02
SLIRP-209ENST00000557342 TOR2AQ5JU69 321 aa8.67□□□□□ -1.02
SLIRP-209ENST00000557342 SMIM12Q96EX1 92 aa8.67□□□□□ -1.02
SLIRP-209ENST00000557342 SMDT1Q9H4I9 107 aa8.67□□□□□ -1.02
SLIRP-209ENST00000557342 KMT2AQ03164 3969 aa8.67□□□□□ -1.02
SLIRP-209ENST00000557342 PGPEP1LA6NFU8 196 aa8.66□□□□□ -1.02
SLIRP-209ENST00000557342 A8MWV9 139 aa8.66□□□□□ -1.02
SLIRP-209ENST00000557342 H3BVH4 76 aa8.66□□□□□ -1.02
SLIRP-209ENST00000557342 CFAP126Q5VTH2 177 aa8.66□□□□□ -1.02
SLIRP-209ENST00000557342 SYT8Q8NBV8 401 aa8.66□□□□□ -1.02
SLIRP-209ENST00000557342 EPPK1P58107 5090 aaKnown RBP8.66□□□□□ -1.02
SLIRP-209ENST00000557342 IGLV2-18A0A075B6J9 118 aa8.65□□□□□ -1.02
SLIRP-209ENST00000557342 TMSB15BA0A087X1C1 80 aa8.65□□□□□ -1.02
SLIRP-209ENST00000557342 GRIFINA4D1Z8 144 aa8.65□□□□□ -1.02
SLIRP-209ENST00000557342 M0R2N4 97 aa8.65□□□□□ -1.02
SLIRP-209ENST00000557342 CXCL1P09341 107 aa8.65□□□□□ -1.02
SLIRP-209ENST00000557342 ARMS2P0C7Q2 107 aa8.65□□□□□ -1.02
SLIRP-209ENST00000557342 SRIP30626 198 aa8.65□□□□□ -1.02
SLIRP-209ENST00000557342 GNG4P50150 75 aa8.65□□□□□ -1.02
SLIRP-209ENST00000557342 PEA15Q15121 130 aa8.65□□□□□ -1.02
SLIRP-209ENST00000557342 ESRGQ1W209 222 aa8.65□□□□□ -1.02
SLIRP-209ENST00000557342 CENPWQ5EE01 88 aa8.65□□□□□ -1.02
SLIRP-209ENST00000557342 ZNRF2Q8NHG8 242 aa8.65□□□□□ -1.02
SLIRP-209ENST00000557342 UPK3BQ9BT76 320 aa8.65□□□□□ -1.02
SLIRP-209ENST00000557342 DERL1Q9BUN8 251 aa8.65□□□□□ -1.02
SLIRP-209ENST00000557342 BIN3Q9NQY0 253 aa8.65□□□□□ -1.02
SLIRP-209ENST00000557342 MRPS16Q9Y3D3 137 aaKnown RBP8.65□□□□□ -1.02
SLIRP-209ENST00000557342 PHLDA3Q9Y5J5 127 aa8.65□□□□□ -1.02
SLIRP-209ENST00000557342 VPS13DQ5THJ4 4388 aa8.64□□□□□ -1.03
SLIRP-209ENST00000557342 K7EQD1 137 aa8.64□□□□□ -1.03
SLIRP-209ENST00000557342 MED14OSP0DP75 135 aa8.64□□□□□ -1.03
SLIRP-209ENST00000557342 GYPEP15421 78 aa8.64□□□□□ -1.03
SLIRP-209ENST00000557342 GATA1P15976 413 aaPredicted RBP8.64□□□□□ -1.03
SLIRP-209ENST00000557342 PRR27Q6MZM9 219 aa8.64□□□□□ -1.03
SLIRP-209ENST00000557342 Q6ZR54 194 aa8.64□□□□□ -1.03
SLIRP-209ENST00000557342 NEGR1Q7Z3B1 354 aa8.64□□□□□ -1.03
SLIRP-209ENST00000557342 SH2D6Q7Z4S9 175 aa8.64□□□□□ -1.03
SLIRP-209ENST00000557342 SLC7A5P1Q8MH63 180 aa8.64□□□□□ -1.03
SLIRP-209ENST00000557342 PRADC1Q9BSG0 188 aa8.64□□□□□ -1.03
SLIRP-209ENST00000557342 EIF5A2Q9GZV4 153 aaKnown RBP8.64□□□□□ -1.03
SLIRP-209ENST00000557342 TRBV6-4A0A1B0GX49 114 aa8.63□□□□□ -1.03
SLIRP-209ENST00000557342 MGST1P10620 155 aaKnown RBP8.63□□□□□ -1.03
SLIRP-209ENST00000557342 SRSF3P84103 164 aaKnown RBP8.63□□□□□ -1.03
SLIRP-209ENST00000557342 RHOHQ15669 191 aa8.63□□□□□ -1.03
SLIRP-209ENST00000557342 ZFP2Q6ZN57 461 aa8.63□□□□□ -1.03
SLIRP-209ENST00000557342 ZFP82Q8N141 532 aa8.63□□□□□ -1.03
SLIRP-209ENST00000557342 DAZAP1Q96EP5 407 aaKnown RBP8.63□□□□□ -1.03
SLIRP-209ENST00000557342 PARLQ9H300 379 aa8.63□□□□□ -1.03
SLIRP-209ENST00000557342 Q9H8V8 135 aa8.63□□□□□ -1.03
SLIRP-209ENST00000557342 SCRT2Q9NQ03 307 aa8.63□□□□□ -1.03
SLIRP-209ENST00000557342 BIRC6Q9NR09 4857 aa8.62□□□□□ -1.03
SLIRP-209ENST00000557342 NBDYA0A0U1RRE5 68 aa8.62□□□□□ -1.03
SLIRP-209ENST00000557342 TMEM250H0YL14 139 aa8.62□□□□□ -1.03
SLIRP-209ENST00000557342 RHODO00212 210 aa8.62□□□□□ -1.03
SLIRP-209ENST00000557342 SOHLH1Q5JUK2 328 aa8.62□□□□□ -1.03
SLIRP-209ENST00000557342 DMRTA1Q5VZB9 504 aa8.62□□□□□ -1.03
SLIRP-209ENST00000557342 LINC00336Q6ZUF6 198 aa8.62□□□□□ -1.03
SLIRP-209ENST00000557342 ZNF575Q86XF7 245 aa8.62□□□□□ -1.03
SLIRP-209ENST00000557342 SLC25A29Q8N8R3 303 aa8.62□□□□□ -1.03
SLIRP-209ENST00000557342 IGHV3-73A0A0B4J1V6 119 aa8.61□□□□□ -1.03
SLIRP-209ENST00000557342 C9JQL5 133 aa8.61□□□□□ -1.03
SLIRP-209ENST00000557342 IGLV2-8P01709 118 aa8.61□□□□□ -1.03
SLIRP-209ENST00000557342 SRP19P09132 144 aaKnown RBP8.61□□□□□ -1.03
SLIRP-209ENST00000557342 RPS20P60866 119 aaKnown RBP8.61□□□□□ -1.03
SLIRP-209ENST00000557342 RPL19P84098 196 aaKnown RBP8.61□□□□□ -1.03
SLIRP-209ENST00000557342 TTC32Q5I0X7 151 aa8.61□□□□□ -1.03
SLIRP-209ENST00000557342 LYPD5Q6UWN5 251 aa8.61□□□□□ -1.03
SLIRP-209ENST00000557342 DNAH6Q9C0G6 4158 aa8.61□□□□□ -1.03
SLIRP-209ENST00000557342 XKRY2A2RUG3 117 aa8.6□□□□□ -1.03
SLIRP-209ENST00000557342 M0R381 172 aa8.6□□□□□ -1.03
SLIRP-209ENST00000557342 OR5AL1P0C617 328 aa8.6□□□□□ -1.03
SLIRP-209ENST00000557342 C1orf134Q5TEV5 83 aa8.6□□□□□ -1.03
SLIRP-209ENST00000557342 SFRP2Q96HF1 295 aa8.6□□□□□ -1.03
SLIRP-209ENST00000557342 TRBV20OR9-2A0A075B6H5 130 aa8.59□□□□□ -1.03
SLIRP-209ENST00000557342 LOC100131303A0A0U1RQF7 123 aa8.59□□□□□ -1.03
SLIRP-209ENST00000557342 A0A1W2PPQ1 181 aa8.59□□□□□ -1.03
SLIRP-209ENST00000557342 TMEM218A2RU14 115 aa8.59□□□□□ -1.03
SLIRP-209ENST00000557342 C19orf71A6NCJ1 209 aa8.59□□□□□ -1.03
SLIRP-209ENST00000557342 SIVA1O15304 175 aa8.59□□□□□ -1.03
SLIRP-209ENST00000557342 SNAI2O43623 268 aa8.59□□□□□ -1.03
SLIRP-209ENST00000557342 P01737 135 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms